Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_O08
         (405 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               26   0.14 
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    25   0.43 
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    22   3.0  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    20   9.3  

>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 26.2 bits (55), Expect = 0.14
 Identities = 14/52 (26%), Positives = 28/52 (53%)
 Frame = +1

Query: 238 IKKK*SNYSFIVFCNIK*KYMFNDNALI*CLSVLLFQKMHISIDISTLIETV 393
           IKK  +NYS  + C ++  ++  ++ +     V +  + +ISID+  L E +
Sbjct: 68  IKKYLTNYSCFITCALEKSHIIQNDEIQLDKLVEMANRKNISIDVKMLSECI 119


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 24.6 bits (51), Expect = 0.43
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -1

Query: 375 TNVNRYVHFLEE*NRQTLNQSIIIKHVLLLYITKNYERIIR 253
           T  N Y+  L + N+  LN  + ++HV    +  N   +IR
Sbjct: 370 TQRNEYLLALSDRNQNVLNNDLNLEHVNFQILGANVNDLIR 410


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +1

Query: 67  KTVEMYQFEANDLITKMIEEKNHAGGQNVY 156
           K   +Y+F  N+L+  +   K+      VY
Sbjct: 103 KVTRLYEFSDNELLVHISTNKSDVKATRVY 132


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 391 QFLLTY*CQ*ICAFSGRVKQ 332
           Q +  Y C+ +C   GRVK+
Sbjct: 240 QIMARYNCERLCNRLGRVKR 259


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,440
Number of Sequences: 438
Number of extensions: 1322
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)