Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_O06
(411 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 272 5e-74
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 272 5e-74
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 272 5e-74
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 272 5e-74
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 272 5e-74
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 272 5e-74
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 272 9e-74
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 272 9e-74
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 272 9e-74
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 266 6e-72
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 255 8e-69
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 134 2e-32
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 120 3e-28
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 97 6e-21
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 95 2e-20
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 78 2e-15
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 66 7e-12
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 66 7e-12
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 44 3e-05
AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical ... 29 0.99
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 29 1.7
AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical ... 27 4.0
AL110484-22|CAB54414.2| 305|Caenorhabditis elegans Hypothetical... 27 5.3
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z70309-7|CAB54292.1| 209|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z29443-11|CAK55173.1| 367|Caenorhabditis elegans Hypothetical p... 27 7.0
U50308-2|AAG24028.1| 791|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z81146-5|CAB03522.3| 699|Caenorhabditis elegans Hypothetical pr... 26 9.2
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 26 9.2
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 26 9.2
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 26 9.2
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 26 9.2
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 26 9.2
AF125443-3|AAD12799.2| 414|Caenorhabditis elegans Hypothetical ... 26 9.2
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 272 bits (668), Expect = 5e-74
Identities = 128/134 (95%), Positives = 132/134 (98%)
Frame = +3
Query: 9 QEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMN 188
QEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIM
Sbjct: 226 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMK 285
Query: 189 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 368
CD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS
Sbjct: 286 CDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 345
Query: 369 ILASLSTFQQMWIS 410
ILASLSTFQQMWIS
Sbjct: 346 ILASLSTFQQMWIS 359
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 272 bits (668), Expect = 5e-74
Identities = 128/134 (95%), Positives = 132/134 (98%)
Frame = +3
Query: 9 QEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMN 188
QEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIM
Sbjct: 226 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMK 285
Query: 189 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 368
CD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS
Sbjct: 286 CDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 345
Query: 369 ILASLSTFQQMWIS 410
ILASLSTFQQMWIS
Sbjct: 346 ILASLSTFQQMWIS 359
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 272 bits (668), Expect = 5e-74
Identities = 128/134 (95%), Positives = 132/134 (98%)
Frame = +3
Query: 9 QEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMN 188
QEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIM
Sbjct: 226 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMK 285
Query: 189 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 368
CD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS
Sbjct: 286 CDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 345
Query: 369 ILASLSTFQQMWIS 410
ILASLSTFQQMWIS
Sbjct: 346 ILASLSTFQQMWIS 359
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 272 bits (668), Expect = 5e-74
Identities = 128/134 (95%), Positives = 132/134 (98%)
Frame = +3
Query: 9 QEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMN 188
QEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIM
Sbjct: 182 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMK 241
Query: 189 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 368
CD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS
Sbjct: 242 CDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 301
Query: 369 ILASLSTFQQMWIS 410
ILASLSTFQQMWIS
Sbjct: 302 ILASLSTFQQMWIS 315
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 272 bits (668), Expect = 5e-74
Identities = 128/134 (95%), Positives = 132/134 (98%)
Frame = +3
Query: 9 QEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMN 188
QEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIM
Sbjct: 212 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMK 271
Query: 189 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 368
CD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS
Sbjct: 272 CDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 331
Query: 369 ILASLSTFQQMWIS 410
ILASLSTFQQMWIS
Sbjct: 332 ILASLSTFQQMWIS 345
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 272 bits (668), Expect = 5e-74
Identities = 128/134 (95%), Positives = 132/134 (98%)
Frame = +3
Query: 9 QEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMN 188
QEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIM
Sbjct: 226 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMK 285
Query: 189 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 368
CD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS
Sbjct: 286 CDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 345
Query: 369 ILASLSTFQQMWIS 410
ILASLSTFQQMWIS
Sbjct: 346 ILASLSTFQQMWIS 359
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 272 bits (666), Expect = 9e-74
Identities = 127/134 (94%), Positives = 132/134 (98%)
Frame = +3
Query: 9 QEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMN 188
QEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIM
Sbjct: 226 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMK 285
Query: 189 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 368
CD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS
Sbjct: 286 CDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 345
Query: 369 ILASLSTFQQMWIS 410
ILASLSTFQQMWIS
Sbjct: 346 ILASLSTFQQMWIS 359
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 272 bits (666), Expect = 9e-74
Identities = 127/134 (94%), Positives = 132/134 (98%)
Frame = +3
Query: 9 QEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMN 188
QEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIM
Sbjct: 226 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMK 285
Query: 189 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 368
CD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS
Sbjct: 286 CDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 345
Query: 369 ILASLSTFQQMWIS 410
ILASLSTFQQMWIS
Sbjct: 346 ILASLSTFQQMWIS 359
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 272 bits (666), Expect = 9e-74
Identities = 127/134 (94%), Positives = 132/134 (98%)
Frame = +3
Query: 9 QEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMN 188
QEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIM
Sbjct: 226 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMK 285
Query: 189 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 368
CD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS
Sbjct: 286 CDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 345
Query: 369 ILASLSTFQQMWIS 410
ILASLSTFQQMWIS
Sbjct: 346 ILASLSTFQQMWIS 359
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 266 bits (651), Expect = 6e-72
Identities = 126/134 (94%), Positives = 131/134 (97%)
Frame = +3
Query: 9 QEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMN 188
QEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIM
Sbjct: 226 QEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMK 285
Query: 189 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 368
CD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGS
Sbjct: 286 CDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGS 344
Query: 369 ILASLSTFQQMWIS 410
ILASLSTFQQMWIS
Sbjct: 345 ILASLSTFQQMWIS 358
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 255 bits (625), Expect = 8e-69
Identities = 120/133 (90%), Positives = 125/133 (93%)
Frame = +3
Query: 12 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMNC 191
E+A AASSSSLEKSYELPDGQVITIGNERFRCPE LFQP+F+GME GIHETTY SIM C
Sbjct: 226 ELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKC 285
Query: 192 DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI 371
DVDIRKDLYANTVLSGGT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSI
Sbjct: 286 DVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSI 345
Query: 372 LASLSTFQQMWIS 410
LASLSTFQQMWIS
Sbjct: 346 LASLSTFQQMWIS 358
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 134 bits (324), Expect = 2e-32
Identities = 63/129 (48%), Positives = 84/129 (65%)
Frame = +3
Query: 21 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMNCDVD 200
T ++S++ SY LPD I I N FR PE LF+P +G E G+ SIM CDVD
Sbjct: 228 TKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVD 287
Query: 201 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 380
+R+ LY+N VLSGGTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+AS
Sbjct: 288 LRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVAS 347
Query: 381 LSTFQQMWI 407
L TF++MW+
Sbjct: 348 LDTFRKMWL 356
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 120 bits (290), Expect = 3e-28
Identities = 63/147 (42%), Positives = 86/147 (58%), Gaps = 13/147 (8%)
Frame = +3
Query: 9 QEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMN 188
QE A ++ L + Y LPDG+VI +G ERF PE LFQP + +E G+ E + I
Sbjct: 229 QEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQA 288
Query: 189 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPP 335
D+D R D Y + VLSGGTTMYPG+ R++KE+ L A KI+I APP
Sbjct: 289 SDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPP 348
Query: 336 ERKYSVWIGGSILASL--STFQQMWIS 410
RK+ V++GG++LA+L Q W+S
Sbjct: 349 SRKHMVFLGGAVLANLMKDRDQDFWVS 375
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 96.7 bits (230), Expect = 6e-21
Identities = 40/109 (36%), Positives = 70/109 (64%)
Frame = +3
Query: 84 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMNCDVDIRKDLYANTVLSGGTTMYPGI 263
I N RF C E LF+P G++ G+H+ + +I+ C +D R+ LY N L+GG ++ PGI
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGI 487
Query: 264 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 410
A+++++E++ + P+T+ ++ P R + ++G I+AS STF+ IS
Sbjct: 488 AEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCIS 536
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 94.7 bits (225), Expect = 2e-20
Identities = 48/127 (37%), Positives = 68/127 (53%), Gaps = 8/127 (6%)
Frame = +3
Query: 54 YELPDGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMNCDVDIRKDLY 218
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 219 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLST 389
+N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 390 FQQMWIS 410
FQQMW+S
Sbjct: 413 FQQMWVS 419
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 78.2 bits (184), Expect = 2e-15
Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 17/125 (13%)
Frame = +3
Query: 78 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMNCDVDIRKDLYANTVLSGGTTMY 254
+ +G ERF PE F P F E I +T I C +D+R+ LY N VLSGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 255 PGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLS 386
A ++Q+++ L+ P + +++I+ ++Y+VW GGS+LAS S
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 387 TFQQM 401
F Q+
Sbjct: 396 EFYQV 400
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 66.5 bits (155), Expect = 7e-12
Identities = 27/82 (32%), Positives = 48/82 (58%)
Frame = +3
Query: 78 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMNCDVDIRKDLYANTVLSGGTTMYP 257
I +G ERF PE LF PS + ++ CG+ E SI C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 258 GIADRMQKEITALAPSTMKIKI 323
G +R+++E+ ++ P+ + +
Sbjct: 323 GFRERLEREVRSMLPAEYGLNV 344
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 66.5 bits (155), Expect = 7e-12
Identities = 27/82 (32%), Positives = 48/82 (58%)
Frame = +3
Query: 78 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMNCDVDIRKDLYANTVLSGGTTMYP 257
I +G ERF PE LF PS + ++ CG+ E SI C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 258 GIADRMQKEITALAPSTMKIKI 323
G +R+++E+ ++ P+ + +
Sbjct: 323 GFRERLEREVRSMLPAEYGLNV 344
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 44.4 bits (100), Expect = 3e-05
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Frame = +3
Query: 180 IMNCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 344
+ C +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 345 ----YSVWIGGSILASL 383
+ W+G S+L SL
Sbjct: 258 NTPLFVSWLGASLLGSL 274
>AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical
protein C39F7.2 protein.
Length = 765
Score = 29.5 bits (63), Expect = 0.99
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = -2
Query: 317 DLHRGWSEGCD-----FLLHTVGNTRVHGGTTRQYCVGVQVFTD---VNVTVHDGVVCRL 162
DLH GWS D +L + + RV GG TR +GV++ D + TV+D
Sbjct: 670 DLH-GWSMYVDGERSWYLHNETHHNRVLGGVTRGTVIGVRLDCDRGTMEYTVNDRKRIYQ 728
Query: 161 VDATSFHTQERGL 123
D+ +F RGL
Sbjct: 729 DDSMAFTNMPRGL 741
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -1
Query: 207 YGCQRHSS*WSCMSSRGCHKLPYPRTRAGREP 112
+ CQRH+ SC G H PY + R P
Sbjct: 423 WNCQRHAGFESCSCDDGYHLSPYDKKTCLRSP 454
>AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical
protein Y87G2A.5 protein.
Length = 1050
Score = 27.5 bits (58), Expect = 4.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 233 VWWYHHVPWYCRPYAEGNHSP 295
+WW H +P Y +A+G P
Sbjct: 507 LWWGHRIPAYYISFADGREQP 527
>AL110484-22|CAB54414.2| 305|Caenorhabditis elegans Hypothetical
protein Y38E10A.22 protein.
Length = 305
Score = 27.1 bits (57), Expect = 5.3
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = -3
Query: 382 REARIDPPIHTEYF--LSGGAMILIFIVDGARAVISFCIRSAIPGYMVVPPDNTVLAYKS 209
++A D P+ T Y L A + I+ + IS +RS +P Y+ N + A +
Sbjct: 26 QQAIADSPLFTAYMKLLKRQAELSPRILSALLSAISSIVRSHLPAYLKFQAKNGLTATEK 85
Query: 208 LRMST 194
L ST
Sbjct: 86 LIQST 90
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
protein H05G16.1 protein.
Length = 1111
Score = 26.6 bits (56), Expect = 7.0
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -2
Query: 236 RQYCVGVQVFTDVNVTVHDGVVCRLVDATSFH 141
R C+ V++ D H GV+C SFH
Sbjct: 23 RLVCIKVRMLDDTVAVFHLGVICFFFCVVSFH 54
>Z70309-7|CAB54292.1| 209|Caenorhabditis elegans Hypothetical
protein R102.8 protein.
Length = 209
Score = 26.6 bits (56), Expect = 7.0
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 407 DPHLLEGREGGEDRSTDPYRILPLWWRDD 321
DP + + D++ D Y +L WW DD
Sbjct: 72 DPFVFDITVYCNDKTRDTYNLLIEWWEDD 100
>Z29443-11|CAK55173.1| 367|Caenorhabditis elegans Hypothetical
protein T07C4.11 protein.
Length = 367
Score = 26.6 bits (56), Expect = 7.0
Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = -1
Query: 210 LYGCQRHSS*-WSCMSSRGCH 151
L+ C+ H S W C+SS CH
Sbjct: 314 LFECEAHGSKIWQCISSPSCH 334
>U50308-2|AAG24028.1| 791|Caenorhabditis elegans Hypothetical
protein F07C3.3 protein.
Length = 791
Score = 26.6 bits (56), Expect = 7.0
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -2
Query: 203 DVNVTVHDGVVCRLVDATSFHTQERGLEESLWATEPFVSDCDDLTVGE 60
DV+ T+HD V RL D + + RG+ SL+ P C D+ V E
Sbjct: 587 DVHKTLHDIVHMRLGDNKAKSDEGRGI--SLFDAIPNTRTCADVIVPE 632
>Z81146-5|CAB03522.3| 699|Caenorhabditis elegans Hypothetical
protein K10D11.3 protein.
Length = 699
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = -3
Query: 253 YMVVPPDNTVLAYKSLRMSTSQFMMELYVVSWMPQASIPK 134
+++ P +T K+ ST Q+ Y W P + IP+
Sbjct: 23 FVLCPTQDTQFPTKNNNSSTDQYNPYYYPYPWWPNSYIPR 62
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 26.2 bits (55), Expect = 9.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 86 RKRKVPLPRGSLPALVLGYGSLWHPRDDIQLHHE 187
RKR+ LPRG++ G HP DI L +E
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNE 1027
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 26.2 bits (55), Expect = 9.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 86 RKRKVPLPRGSLPALVLGYGSLWHPRDDIQLHHE 187
RKR+ LPRG++ G HP DI L +E
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNE 1611
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 26.2 bits (55), Expect = 9.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 86 RKRKVPLPRGSLPALVLGYGSLWHPRDDIQLHHE 187
RKR+ LPRG++ G HP DI L +E
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNE 1027
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 26.2 bits (55), Expect = 9.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 86 RKRKVPLPRGSLPALVLGYGSLWHPRDDIQLHHE 187
RKR+ LPRG++ G HP DI L +E
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNE 1611
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 26.2 bits (55), Expect = 9.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 86 RKRKVPLPRGSLPALVLGYGSLWHPRDDIQLHHE 187
RKR+ LPRG++ G HP DI L +E
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNE 1611
>AF125443-3|AAD12799.2| 414|Caenorhabditis elegans Hypothetical
protein H32C10.1 protein.
Length = 414
Score = 26.2 bits (55), Expect = 9.2
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = -3
Query: 244 VPPDNTVLAYKSLRMSTSQFMMELYVVSWMPQASIPKNEGWKRASGQRNLSFP-IVMT*P 68
VP DN ++++ LRM T ++ VV +I K + R ++ + +V P
Sbjct: 85 VPADNVLMSHSPLRMFTDLHDKQVLVVGQKNARAIAKGIIFFRVGFKKVTTIDHLVKWFP 144
Query: 67 SGSS*DFSRELLE 29
DFSR+L++
Sbjct: 145 HLDCTDFSRKLVD 157
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,051,547
Number of Sequences: 27780
Number of extensions: 218776
Number of successful extensions: 712
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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