Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_O06
(411 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB023025-1|BAA74592.1| 133|Apis mellifera actin protein. 277 5e-77
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 25 0.25
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 24 0.77
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 2.4
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 4.1
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 4.1
U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein. 21 5.4
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 21 5.4
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 20 9.5
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 20 9.5
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 20 9.5
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 20 9.5
>AB023025-1|BAA74592.1| 133|Apis mellifera actin protein.
Length = 133
Score = 277 bits (678), Expect = 5e-77
Identities = 131/133 (98%), Positives = 132/133 (99%)
Frame = +3
Query: 12 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMNC 191
EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIM C
Sbjct: 1 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 60
Query: 192 DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI 371
DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE+KYSVWIGGSI
Sbjct: 61 DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPEKKYSVWIGGSI 120
Query: 372 LASLSTFQQMWIS 410
LASLSTFQQMWIS
Sbjct: 121 LASLSTFQQMWIS 133
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 25.4 bits (53), Expect = 0.25
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +1
Query: 280 RKSQPSLHPR*RSKSSRHQ 336
++SQP +HPR + ++ +HQ
Sbjct: 215 QQSQPGMHPRQQQQAQQHQ 233
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 23.8 bits (49), Expect = 0.77
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 198 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 359
DI++ Y + V MYP + M+K I+ + KI I P E K +WI
Sbjct: 349 DIKEMEYLDKVFKETLRMYPPASILMRKAISDYTFNDTKITI--PKEMK--IWI 398
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.2 bits (45), Expect = 2.4
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +3
Query: 123 QPSFLGMEACGIHETTYNSIMNCDVDIRKDLYANTVL 233
+ +FLG+ + +YN + + D + KDL+ +L
Sbjct: 328 ETTFLGLIRLIVLNLSYNMLTHIDARMFKDLFFLQIL 364
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 4.1
Identities = 5/10 (50%), Positives = 6/10 (60%)
Frame = +2
Query: 236 WWYHHVPWYC 265
WW H + W C
Sbjct: 526 WWSHVLGWLC 535
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 4.1
Identities = 5/10 (50%), Positives = 6/10 (60%)
Frame = +2
Query: 236 WWYHHVPWYC 265
WW H + W C
Sbjct: 579 WWSHVLGWLC 588
>U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein.
Length = 182
Score = 21.0 bits (42), Expect = 5.4
Identities = 9/40 (22%), Positives = 18/40 (45%)
Frame = +2
Query: 26 CLQQLPREVLRTPRRSSHHNRKRKVPLPRGSLPALVLGYG 145
C++ P + RR H +P+P+ + ++ YG
Sbjct: 32 CVRVSPVITIEPRRRKFHKPITLTIPVPQAANKGMINQYG 71
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 21.0 bits (42), Expect = 5.4
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -3
Query: 157 MPQASIPKNEGWKRASGQRNLSFPIVMT 74
+ Q IP + +G+RN+ PIV +
Sbjct: 165 LKQVKIPHDIAINSTTGKRNVVTPIVQS 192
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 20.2 bits (40), Expect = 9.5
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = +2
Query: 299 SIHDEDQNHRATREEVFCMDRWIDPRL 379
S+ D++ E +W DPRL
Sbjct: 96 SLASPDESSLKYEVEFLLQQQWYDPRL 122
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 20.2 bits (40), Expect = 9.5
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = +2
Query: 299 SIHDEDQNHRATREEVFCMDRWIDPRL 379
S+ D++ E +W DPRL
Sbjct: 96 SLASPDESSLKYEVEFLLQQQWYDPRL 122
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 20.2 bits (40), Expect = 9.5
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = +2
Query: 299 SIHDEDQNHRATREEVFCMDRWIDPRL 379
S+ D++ E +W DPRL
Sbjct: 147 SLASPDESSLKYEVEFLLQQQWYDPRL 173
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 20.2 bits (40), Expect = 9.5
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = +2
Query: 299 SIHDEDQNHRATREEVFCMDRWIDPRL 379
S+ D++ E +W DPRL
Sbjct: 96 SLASPDESSLKYEVEFLLQQQWYDPRL 122
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,215
Number of Sequences: 438
Number of extensions: 2641
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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