Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_O06
(411 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 250 2e-67
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 248 8e-67
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 248 8e-67
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 248 1e-66
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 246 6e-66
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 246 6e-66
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 239 4e-64
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 237 2e-63
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 237 2e-63
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 228 1e-60
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 219 8e-58
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 181 1e-46
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 117 3e-27
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 108 2e-24
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 94 4e-20
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 88 2e-18
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 72 2e-13
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 64 3e-11
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 57 4e-09
At5g43500.2 68418.m05318 expressed protein 42 2e-04
At5g43500.1 68418.m05319 expressed protein 42 2e-04
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 33 0.099
At4g30520.1 68417.m04333 leucine-rich repeat family protein / pr... 29 1.2
At1g53510.1 68414.m06068 mitogen-activated protein kinase, putat... 28 2.8
At1g43700.1 68414.m05020 VirE2-interacting protein (VIP1) identi... 28 2.8
At1g05580.1 68414.m00578 cation/hydrogen exchanger, putative (CH... 28 2.8
At3g57790.1 68416.m06438 glycoside hydrolase family 28 protein /... 27 3.7
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 27 4.9
At5g24740.1 68418.m02920 expressed protein 27 6.5
At3g46600.1 68416.m05058 scarecrow transcription factor family p... 27 6.5
At3g21510.1 68416.m02714 two-component phosphorelay mediator 3 (... 27 6.5
At4g02780.1 68417.m00378 copalyl diphosphate synthase / CPS / en... 26 8.6
At3g21465.1 68416.m02707 expressed protein 26 8.6
At2g36430.1 68415.m04472 expressed protein contains Pfam profile... 26 8.6
At2g33010.1 68415.m04045 ubiquitin-associated (UBA)/TS-N domain-... 26 8.6
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 250 bits (613), Expect = 2e-67
Identities = 116/134 (86%), Positives = 124/134 (92%)
Frame = +3
Query: 9 QEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMN 188
QEM TA +SSS+EKSYELPDGQVITIG ERFRCPE LFQPS +GMEA GIHETTYNSIM
Sbjct: 227 QEMETANTSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMK 286
Query: 189 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 368
CDVDIRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGS
Sbjct: 287 CDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGS 346
Query: 369 ILASLSTFQQMWIS 410
ILASLSTFQQMWI+
Sbjct: 347 ILASLSTFQQMWIA 360
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 248 bits (608), Expect = 8e-67
Identities = 115/134 (85%), Positives = 124/134 (92%)
Frame = +3
Query: 9 QEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMN 188
QEM T+ +SSS+EK+YELPDGQVITIG ERFRCPE LFQPSF+GMEA GIHETTYNSIM
Sbjct: 227 QEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMK 286
Query: 189 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 368
CDVDIRKDLY N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGS
Sbjct: 287 CDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGS 346
Query: 369 ILASLSTFQQMWIS 410
ILASLSTFQQMWIS
Sbjct: 347 ILASLSTFQQMWIS 360
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 248 bits (608), Expect = 8e-67
Identities = 115/134 (85%), Positives = 124/134 (92%)
Frame = +3
Query: 9 QEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMN 188
QEM T+ +SSS+EK+YELPDGQVITIG ERFRCPE LFQPSF+GMEA GIHETTYNSIM
Sbjct: 227 QEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMK 286
Query: 189 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 368
CDVDIRKDLY N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGS
Sbjct: 287 CDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGS 346
Query: 369 ILASLSTFQQMWIS 410
ILASLSTFQQMWIS
Sbjct: 347 ILASLSTFQQMWIS 360
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 248 bits (606), Expect = 1e-66
Identities = 115/134 (85%), Positives = 124/134 (92%)
Frame = +3
Query: 9 QEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMN 188
QE+ TA SSSS+EK+YELPDGQVITIG ERFRCPE LFQPS +GMEA GIHETTYNSIM
Sbjct: 227 QELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMK 286
Query: 189 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 368
CDVDIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGS
Sbjct: 287 CDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGS 346
Query: 369 ILASLSTFQQMWIS 410
ILASLSTFQQMWIS
Sbjct: 347 ILASLSTFQQMWIS 360
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 246 bits (601), Expect = 6e-66
Identities = 112/134 (83%), Positives = 124/134 (92%)
Frame = +3
Query: 9 QEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMN 188
QE+ TA +SSS+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME GIHETTYNSIM
Sbjct: 227 QELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMK 286
Query: 189 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 368
CDVDIRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGS
Sbjct: 287 CDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGS 346
Query: 369 ILASLSTFQQMWIS 410
ILASLSTFQQMWI+
Sbjct: 347 ILASLSTFQQMWIA 360
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 246 bits (601), Expect = 6e-66
Identities = 112/134 (83%), Positives = 124/134 (92%)
Frame = +3
Query: 9 QEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMN 188
QE+ TA +SSS+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME GIHETTYNSIM
Sbjct: 227 QELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMK 286
Query: 189 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 368
CDVDIRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGS
Sbjct: 287 CDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGS 346
Query: 369 ILASLSTFQQMWIS 410
ILASLSTFQQMWI+
Sbjct: 347 ILASLSTFQQMWIA 360
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 239 bits (586), Expect = 4e-64
Identities = 112/133 (84%), Positives = 122/133 (91%)
Frame = +3
Query: 9 QEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMN 188
QEM T+ +SSS+EK+YELPDGQVITIG ERFRCPE LFQPSF+GMEA GIHETTYNSIM
Sbjct: 227 QEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMK 286
Query: 189 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 368
CDVDIRKDLY N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGS
Sbjct: 287 CDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGS 346
Query: 369 ILASLSTFQQMWI 407
ILASLSTFQQ+ I
Sbjct: 347 ILASLSTFQQVKI 359
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 237 bits (581), Expect = 2e-63
Identities = 110/134 (82%), Positives = 121/134 (90%)
Frame = +3
Query: 9 QEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMN 188
QE+ T+ +SSS+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME GIHETTYNSIM
Sbjct: 227 QELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMK 286
Query: 189 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 368
CDVDIRKDLY N VLSGGTTM+ GI DRM KEITALAPS+MKIK++APPERKYSVWIGGS
Sbjct: 287 CDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGS 346
Query: 369 ILASLSTFQQMWIS 410
ILASLSTFQQMWI+
Sbjct: 347 ILASLSTFQQMWIA 360
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 237 bits (581), Expect = 2e-63
Identities = 110/134 (82%), Positives = 121/134 (90%)
Frame = +3
Query: 9 QEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMN 188
QE+ T+ +SSS+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME GIHETTYNSIM
Sbjct: 227 QELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMK 286
Query: 189 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 368
CDVDIRKDLY N VLSGGTTM+ GI DRM KEITALAPS+MKIK++APPERKYSVWIGGS
Sbjct: 287 CDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGS 346
Query: 369 ILASLSTFQQMWIS 410
ILASLSTFQQMWI+
Sbjct: 347 ILASLSTFQQMWIA 360
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 228 bits (557), Expect = 1e-60
Identities = 103/134 (76%), Positives = 117/134 (87%)
Frame = +3
Query: 9 QEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMN 188
QEM A +SS+++++YELPDGQVITIG ERFRCPE LFQ S +GME GIHETTYNSIM
Sbjct: 228 QEMEKATTSSAIDRTYELPDGQVITIGAERFRCPEVLFQTSLIGMETSGIHETTYNSIMK 287
Query: 189 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 368
CDVDIRKDLY N VLSGGTTM+PGIADRM KEI ALAP +MKIK++APPERKYSVW+GGS
Sbjct: 288 CDVDIRKDLYGNIVLSGGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVGGS 347
Query: 369 ILASLSTFQQMWIS 410
ILASLS+F MWI+
Sbjct: 348 ILASLSSFAPMWIT 361
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 219 bits (534), Expect = 8e-58
Identities = 100/134 (74%), Positives = 114/134 (85%)
Frame = +3
Query: 9 QEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMN 188
QEM A SS+++++YELPDGQVITIG ERFRCPE LFQPS +GME GIHE TYNSIM
Sbjct: 179 QEMEKATKSSAIDRTYELPDGQVITIGAERFRCPEVLFQPSLIGMETSGIHEKTYNSIMK 238
Query: 189 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 368
CD DIRKDLY N VLSGGTTM+ GI +RM KEI ALA + M+IKI+APPERKYSVWIGGS
Sbjct: 239 CDDDIRKDLYGNIVLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIGGS 298
Query: 369 ILASLSTFQQMWIS 410
ILASLST++QMWI+
Sbjct: 299 ILASLSTYEQMWIT 312
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 181 bits (441), Expect = 1e-46
Identities = 81/134 (60%), Positives = 101/134 (75%)
Frame = +3
Query: 9 QEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMN 188
QEM +++K+Y LPDGQ ITI ERF CPE LFQPS +G E+ GIHE T NSI+
Sbjct: 216 QEMEKTTKGWTIDKTYVLPDGQEITIEAERFMCPEVLFQPSVIGKESSGIHEATRNSILK 275
Query: 189 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 368
C VD R+D+Y N +++GGTTM GI +RM KE+ AL PS+MK+K++ PPE + SVWIGGS
Sbjct: 276 CPVDTRRDMYGNILMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIGGS 335
Query: 369 ILASLSTFQQMWIS 410
ILASLSTF QMWI+
Sbjct: 336 ILASLSTFHQMWIT 349
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 117 bits (282), Expect = 3e-27
Identities = 59/135 (43%), Positives = 88/135 (65%), Gaps = 15/135 (11%)
Frame = +3
Query: 51 SYELPDGQVITIGNERFRCPEALFQPSFL----GMEAC--------GIHETTYNSIMNCD 194
SYELPDGQ + IG +RF+ P+ +F PS + GME G+ SI CD
Sbjct: 290 SYELPDGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCD 349
Query: 195 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIA---PPERKYSVWIGG 365
VDIR++LY++ +L+GGT+ + +R++K++ +P + ++K++A ER++SVWIGG
Sbjct: 350 VDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGG 409
Query: 366 SILASLSTFQQMWIS 410
SILASL +FQQMW S
Sbjct: 410 SILASLGSFQQMWFS 424
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 108 bits (259), Expect = 2e-24
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 12/147 (8%)
Frame = +3
Query: 6 RQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIM 185
++E ++ L K+Y LPDG+VI +G ERF+ PEALF P + +E G+ + + I
Sbjct: 225 KRESQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQ 284
Query: 186 NCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI------TALAPS-----TMKIKIIAP 332
D+D R LY + VLSGG+TMYPG+ R++KEI T L + ++++I P
Sbjct: 285 EMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDP 344
Query: 333 PERKYSVWIGGSILAS-LSTFQQMWIS 410
P RK+ V++GG++LA + + WI+
Sbjct: 345 PRRKHMVYLGGAVLAGIMKDAPEFWIN 371
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 93.9 bits (223), Expect = 4e-20
Identities = 54/130 (41%), Positives = 71/130 (54%), Gaps = 6/130 (4%)
Frame = +3
Query: 12 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMNC 191
E+A + + + + LPDGQVI+IG ER+ EALFQPS LG+E GI E I
Sbjct: 209 EIAYKKTQNCEIEQHTLPDGQVISIGRERYSVGEALFQPSILGLEEHGIVEQLVRIISTV 268
Query: 192 DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE------RKYSV 353
+ + L NTVL GGTT G R QKE L S ++ ++ PPE YS
Sbjct: 269 SSENHRQLLENTVLCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSA 327
Query: 354 WIGGSILASL 383
W+GG+ILA +
Sbjct: 328 WVGGAILAKV 337
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 88.2 bits (209), Expect = 2e-18
Identities = 41/111 (36%), Positives = 65/111 (58%)
Frame = +3
Query: 78 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMNCDVDIRKDLYANTVLSGGTTMYP 257
I + NERF PE LFQP+ LGM G+ E +I +C ++ LY + +L+GG+T++P
Sbjct: 293 IDLTNERFLVPETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFP 352
Query: 258 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 410
+ +R++ E+ L P +KI + VW GGS+LAS F+ M ++
Sbjct: 353 QLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVT 403
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 71.7 bits (168), Expect = 2e-13
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Frame = +3
Query: 24 AASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMNCD-VD 200
A S + S E+ T+ ERF+ E LFQP GM A +H+ + +CD
Sbjct: 325 AELSKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAGMRAMSLHQAVSLCMDHCDAAG 384
Query: 201 IRKD--LYANTVLSGGTTMYPGIADRMQKEITALAPSTMK--IKIIAPPERKYSVWIGGS 368
+ D + VL+GG+ PG+++R+++E+ PS++ I++I PP + W G
Sbjct: 385 LTGDDSWFKTVVLTGGSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAK 444
Query: 369 ILASLSTFQQMW 404
++++LS F W
Sbjct: 445 LISNLSIFPGPW 456
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 64.5 bits (150), Expect = 3e-11
Identities = 31/108 (28%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Frame = +3
Query: 78 ITIGNERFRCPEALFQPSFLGMEACGIHE---TTYNSIMNCDVDIRKDLYANTVLSGGTT 248
I IG ERFRCPE LF P+ +G++ G+ E T+ + + + ++ + L ++ +++GG +
Sbjct: 589 IVIGIERFRCPEILFHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCS 648
Query: 249 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 392
+ PG+ +R++ I + P I ++ + W G S A+ F
Sbjct: 649 LLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNF 696
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 57.2 bits (132), Expect = 4e-09
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 17/120 (14%)
Frame = +3
Query: 84 IGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMNCDVDIRKDLYANTVLSGGTTMYPG 260
+G ERF PE F P + + I + +D R+ LY N VLSGG+TM+
Sbjct: 280 VGYERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKD 339
Query: 261 IADRMQKEITALAPS----------------TMKIKIIAPPERKYSVWIGGSILASLSTF 392
R+Q+++ + + +++ +++ P ++++VW GGS+L+S F
Sbjct: 340 FGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQRFAVWFGGSVLSSTPEF 399
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Frame = +3
Query: 144 EACGIHETTYNSIMNCD-VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 320
E G+ E +SI++ +D+R+ L+++ L GG + G+ +++ + P T I
Sbjct: 458 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 517
Query: 321 II----APPERKYSVWIGGSILASLSTFQQMWI 407
+ + E ++ W GG+IL L ++ WI
Sbjct: 518 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWI 550
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Frame = +3
Query: 144 EACGIHETTYNSIMNCD-VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 320
E G+ E +SI++ +D+R+ L+++ L GG + G+ +++ + P T I
Sbjct: 470 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 529
Query: 321 II----APPERKYSVWIGGSILASLSTFQQMWI 407
+ + E ++ W GG+IL L ++ WI
Sbjct: 530 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWI 562
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 32.7 bits (71), Expect = 0.099
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = +3
Query: 156 IHETTYNSIMNCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 335
I E Y I+ + KD Y N+ G + +YP ++K+ L ++ K + PP
Sbjct: 336 IRELIYREILEYHPQLLKD-YMNS--EGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPP 392
Query: 336 ERKYS 350
+RK++
Sbjct: 393 DRKHA 397
>At4g30520.1 68417.m04333 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 648
Score = 29.1 bits (62), Expect = 1.2
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = -3
Query: 235 DNTVLAYKSLR-----MSTSQFMMELYVVSWMPQASIPKNEGWKRASGQRNLSFPIVMT* 71
D T++A K L+ SQF MEL ++S ++ + G+ SG+R L +P +
Sbjct: 324 DGTMVAVKRLKDINGTSGDSQFRMELEMISLAVHKNLLRLIGYCATSGERLLVYPYM--- 380
Query: 70 PSGS 59
P+GS
Sbjct: 381 PNGS 384
>At1g53510.1 68414.m06068 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK18) mitogen-activated protein
kinase (MAPK)(AtMPK18), PMID:12119167
Length = 603
Score = 27.9 bits (59), Expect = 2.8
Identities = 15/65 (23%), Positives = 30/65 (46%)
Frame = +3
Query: 156 IHETTYNSIMNCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 335
I E Y I+ + KD + + G +YP ++++ T L ++ + + P
Sbjct: 336 IRELIYREILEYHPQLLKDYMSGS--EGSNFVYPSAIGHLRQQFTYLEENSSRNGPVIPL 393
Query: 336 ERKYS 350
ERK++
Sbjct: 394 ERKHA 398
>At1g43700.1 68414.m05020 VirE2-interacting protein (VIP1) identical
to VirE2-interacting protein VIP1 GB:AAF37279 GI:7258340
from [Arabidopsis thaliana]
Length = 341
Score = 27.9 bits (59), Expect = 2.8
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 275 AEGNHSPRSIHDEDQNHRATREEVFCMDRWIDPRLPLYLPADVD 406
+E H P + +HR R E F ID L L+ P+D+D
Sbjct: 14 SEIEHMPEAPRQRISHHRRARSETFFSGESIDDLL-LFDPSDID 56
>At1g05580.1 68414.m00578 cation/hydrogen exchanger, putative
(CHX23) monovalent cation:proton antiporter family 2
(CPA2) member, PMID:11500563
Length = 867
Score = 27.9 bits (59), Expect = 2.8
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = -3
Query: 343 FLSGGAMILIFIVDGARAVISFCIRSAIPGYMVVPPDNTVLAYKSLRMSTSQFM 182
FLSG M L +I+ G RA I F ++ MVV ++ L + TS FM
Sbjct: 333 FLSGILMPLFYIICGLRADIGFMLQFTDKFMMVVVICSSFLVKIVTTVITSLFM 386
>At3g57790.1 68416.m06438 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein weak
similarity to SP|P15922
Exo-poly-alpha-D-galacturonosidase precursor (EC
3.2.1.82) (Exo-PG) {Erwinia chrysanthemi}; contains
PF00295: Glycosyl hydrolases family 28
Length = 490
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 338 LWWRDDFDLHRGWSEGCDFLLHTVGNTRVHGGTTRQY 228
L W DD D++ W+ +F TV N G T+ Y
Sbjct: 435 LKWSDDDDVNAAWNVPLEFRPSTVNNVSFVGFTSGLY 471
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 27.1 bits (57), Expect = 4.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 24 AASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 143
A S + S E+ T+ ERF+ E LFQP G+
Sbjct: 325 AELSKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAGI 364
>At5g24740.1 68418.m02920 expressed protein
Length = 3306
Score = 26.6 bits (56), Expect = 6.5
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 406 IHICWKVEREARIDPPIHTEYFLSGGAMILI 314
I + W +ERE ++ IHT+ SGG + +I
Sbjct: 3201 IDLVWNIEREIGLESVIHTD--CSGGVVRII 3229
>At3g46600.1 68416.m05058 scarecrow transcription factor family
protein scarecrow-like 11 - Arabidopsis thaliana,
EMBL:AF036307
Length = 583
Score = 26.6 bits (56), Expect = 6.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -2
Query: 182 DGVVCRLVDATSFHTQERGLEESLWATEPFVSDCDDLTVGEF 57
+G C L D+ + ER E L P D +D ++G F
Sbjct: 76 EGQSCMLEDSLALQAAERSFFEVLQDQTPISGDLEDGSLGNF 117
>At3g21510.1 68416.m02714 two-component phosphorelay mediator 3
(HP3) identical to ATHP3 [Arabidopsis thaliana]
GI:4156245
Length = 154
Score = 26.6 bits (56), Expect = 6.5
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 20 HRCLQQLPRE-VLRTPRRSSHHNRKRKVPLPRGSLPALVLGY 142
HRCLQQ+ +E L R + ++++ G +PA+ LG+
Sbjct: 113 HRCLQQVKQEYYLVKNRLETLFKLEQQIVASGGMIPAVELGF 154
>At4g02780.1 68417.m00378 copalyl diphosphate synthase / CPS /
ent-kaurene synthetase A (GA1) identical to GI:571330
[PMID: 7994182]; formerly called ent-kaurene synthetase
A
Length = 802
Score = 26.2 bits (55), Expect = 8.6
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +2
Query: 5 EAGDGHRCLQQLPREVLRTPRRSSHHNRKRKVPLPR-GSLPA 127
E+ D R E + RRS HH R + L R GS+ A
Sbjct: 601 ESSDSRRSFSDQFHEYIANARRSDHHFNDRNMRLDRPGSVQA 642
>At3g21465.1 68416.m02707 expressed protein
Length = 388
Score = 26.2 bits (55), Expect = 8.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 70 VKSSQSETKGSVAQRLSSSPRSWVWKLVASTR 165
VK S+ SV + S P +W+W L+ + R
Sbjct: 84 VKELHSKILDSVNVKRSMPPNAWLWSLIDNCR 115
>At2g36430.1 68415.m04472 expressed protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 448
Score = 26.2 bits (55), Expect = 8.6
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 147 ACGIHETTYNSIMNCDVDIRKDL 215
AC +H TTY ++++C + KD+
Sbjct: 327 ACSMHFTTYATLLDCLTNTYKDV 349
>At2g33010.1 68415.m04045 ubiquitin-associated (UBA)/TS-N
domain-containing protein contains Pfam profile PF00627:
UBA/TS-N domain
Length = 649
Score = 26.2 bits (55), Expect = 8.6
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 153 GIHETTYNSIMNCDVDIRKDLYANTVLSGGT 245
G H ++++ +MN DVD D+Y ++S +
Sbjct: 234 GDHSSSFSGLMNVDVDEFGDVYDIPIMSSSS 264
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,821,219
Number of Sequences: 28952
Number of extensions: 216967
Number of successful extensions: 771
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 615542944
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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