Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_O04
(363 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160... 157 2e-39
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164... 157 2e-39
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171... 156 6e-39
03_02_0966 + 12783515-12783901 29 0.85
03_02_0935 - 12517564-12517650,12517995-12518060,12518156-125181... 29 0.85
01_05_0669 - 24152057-24152110,24152224-24152308,24152401-241524... 29 0.85
06_01_0464 - 3300356-3300673,3300757-3301244,3301315-3302137 29 1.5
01_06_1676 - 39084928-39085016,39085462-39085555,39085664-390857... 29 1.5
01_01_0703 - 5425713-5425862,5426302-5426451,5426853-5426964,542... 29 1.5
12_02_1270 + 27466516-27466621,27466722-27466885,27467385-274681... 28 2.0
04_04_0095 - 22775340-22776017 28 2.0
02_03_0041 + 14275897-14276370 28 2.0
07_01_0115 + 851505-852368,852611-852730,853000-853020,853253-85... 28 2.6
04_01_0142 + 1640472-1640611,1641618-1641744,1642233-1642425,164... 28 2.6
06_03_0026 + 15623824-15624339 27 4.5
06_01_1023 - 7996240-7996369,7997166-7997260,7997430-7997515,799... 27 4.5
03_01_0610 + 4478521-4478715,4480003-4480090,4480255-4480321,448... 27 4.5
10_06_0088 - 10538037-10539463,10539696-10539789 27 6.0
07_03_1026 - 23369298-23370326 27 6.0
06_03_1442 - 30172595-30172606,30172607-30172684,30173034-301734... 27 6.0
06_03_1439 - 30157110-30157121,30157122-30157199,30157549-301579... 27 6.0
06_03_1427 - 30090464-30090475,30090476-30090553,30090903-300913... 27 6.0
06_03_1422 + 30058936-30058975,30059057-30059233,30060848-300610... 27 6.0
05_03_0155 - 9002049-9002134,9002825-9004139 27 6.0
03_05_0291 - 22837412-22838128 27 6.0
02_02_0528 + 11199799-11200470,11201850-11201951,11202858-112034... 27 6.0
09_04_0695 - 19547101-19548010,19548089-19548587,19549461-195497... 26 7.9
04_04_0969 - 29787617-29787919,29788019-29788180,29788962-297890... 26 7.9
03_05_0598 + 26006027-26006746,26007992-26008094,26008847-26012394 26 7.9
03_02_0052 + 5285061-5285106,5285711-5285754,5286317-5286539,528... 26 7.9
>12_01_0211 -
1601129-1601272,1601670-1602062,1602142-1602240,
1602920-1602988,1603071-1603328
Length = 320
Score = 157 bits (381), Expect = 2e-39
Identities = 70/117 (59%), Positives = 94/117 (80%)
Frame = +2
Query: 8 AFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 187
+FFQ L+IPTKI+KGT+EII V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDS
Sbjct: 139 SFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDS 198
Query: 188 GTIFAPAILDIKPEDLREKFLAGVANVAALSWSIGYPTVASAPHSIANGFKNLLAIA 358
G++F+P +LD+ EDL EKF +GV+ VA++S +I YPT+A+APH NG+KN+LA+A
Sbjct: 199 GSVFSPEVLDLTEEDLMEKFASGVSMVASVSLAISYPTIAAAPHMFLNGYKNVLAVA 255
>11_01_0210 -
1647922-1648065,1648459-1648851,1648930-1649028,
1649706-1649774,1649877-1650134
Length = 320
Score = 157 bits (381), Expect = 2e-39
Identities = 70/117 (59%), Positives = 94/117 (80%)
Frame = +2
Query: 8 AFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 187
+FFQ L+IPTKI+KGT+EII V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDS
Sbjct: 139 SFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDS 198
Query: 188 GTIFAPAILDIKPEDLREKFLAGVANVAALSWSIGYPTVASAPHSIANGFKNLLAIA 358
G++F+P +LD+ EDL EKF +GV+ VA++S +I YPT+A+APH NG+KN+LA+A
Sbjct: 199 GSVFSPEVLDLTEEDLMEKFASGVSMVASVSLAISYPTIAAAPHMFLNGYKNVLAVA 255
>08_01_0215 -
1714224-1714364,1714795-1715187,1715279-1715377,
1716248-1716316,1716408-1716665
Length = 319
Score = 156 bits (378), Expect = 6e-39
Identities = 69/117 (58%), Positives = 94/117 (80%)
Frame = +2
Query: 8 AFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 187
+FFQ L+IPTKI+KGT+EII V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDS
Sbjct: 139 SFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDS 198
Query: 188 GTIFAPAILDIKPEDLREKFLAGVANVAALSWSIGYPTVASAPHSIANGFKNLLAIA 358
G++F+P +LD+ +DL EKF +GV+ VA++S +I YPT+A+APH NG+KN+LA+A
Sbjct: 199 GSVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISYPTIAAAPHMFLNGYKNVLAVA 255
>03_02_0966 + 12783515-12783901
Length = 128
Score = 29.5 bits (63), Expect = 0.85
Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 251 AGVANVAALSWSIGYPTVASAPHSIANGFKN-LLAIAA 361
AG+A VAA++ ++ P VA A +++ KN LL+IA+
Sbjct: 67 AGIAAVAAVAAALAVPEVAEAAPALSPSLKNFLLSIAS 104
>03_02_0935 -
12517564-12517650,12517995-12518060,12518156-12518185,
12518279-12518377,12518578-12518673,12519221-12519271,
12519358-12519424,12519516-12519610,12519928-12520009,
12520609-12520658,12520741-12520791,12521749-12521832,
12521918-12522028,12522276-12522425,12522858-12522975,
12523118-12523290
Length = 469
Score = 29.5 bits (63), Expect = 0.85
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 2 HEAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATL 124
H+AF ++ IS ++I ND+ +L G + G E L
Sbjct: 276 HDAFVESSGAVNTISASLMKIANDIRLLGSGPRCGLGELIL 316
>01_05_0669 -
24152057-24152110,24152224-24152308,24152401-24152486,
24153129-24154341,24154441-24154529,24154607-24154639,
24154674-24154859,24155290-24155380,24155588-24155622,
24155736-24155817,24155968-24156020,24156404-24156469,
24156752-24156820,24156821-24156984,24157925-24158432,
24158543-24158602
Length = 957
Score = 29.5 bits (63), Expect = 0.85
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = -1
Query: 363 TAAMASRFLKPFAME*GADATVGYPMDH--ESAATLATPARNFSRRSSGLMSRIAGAKMV 190
T +RF PF + ++ YP DH + A T S R L + + +
Sbjct: 473 TGPNTARFYPPFHTTNSKEGSISYPNDHKPQPEARNVTENSRLSGREPTLTDTASDSFLN 532
Query: 189 PESYTCLTTRPYEKGEMFNMLRRVASEAPT 100
PES +T P+E+ E+ ++ EA T
Sbjct: 533 PES----STNPHEQ-ELMGCVKGPTKEAYT 557
>06_01_0464 - 3300356-3300673,3300757-3301244,3301315-3302137
Length = 542
Score = 28.7 bits (61), Expect = 1.5
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 86 KPGDKVGASEATLLNMLNISPFS--YGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGV 259
KP D V +S TLL N + FS Y L +++ + A A D +++ EK G+
Sbjct: 423 KPSDVVASSYVTLLQAANYATFSLDYALELEERLRARERDAAAEADAMRKEVEEKAQRGL 482
Query: 260 ANVAA 274
A A
Sbjct: 483 AAAKA 487
>01_06_1676 -
39084928-39085016,39085462-39085555,39085664-39085750,
39085941-39086073,39086451-39086724,39086863-39086989,
39087095-39087345,39087476-39087575
Length = 384
Score = 28.7 bits (61), Expect = 1.5
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +2
Query: 152 SYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAAL 277
SYG V V DSGT A LD + +FL VA V+ L
Sbjct: 83 SYGRVYYAVLDSGTKIAVKKLDSNENEPTSEFLTQVALVSRL 124
>01_01_0703 -
5425713-5425862,5426302-5426451,5426853-5426964,
5427120-5427481,5427578-5427712,5427812-5427889,
5427989-5428174,5428266-5428452,5428552-5428658,
5428732-5428806,5428885-5429040,5429165-5429437,
5429548-5429643,5429724-5429814,5429883-5430385
Length = 886
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +2
Query: 59 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAI 211
E++ +++P D VG S +++ +++ P+S VV+ +Y+S + A I
Sbjct: 346 EMLPSGFLIRPSD-VGGSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKI 395
>12_02_1270 +
27466516-27466621,27466722-27466885,27467385-27468173,
27468263-27468479,27469078-27469256,27470233-27470474,
27470607-27470994
Length = 694
Score = 28.3 bits (60), Expect = 2.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 256 SSKELLAKVLRLDVENCRREDGTGVVHLFDNKTIRK 149
+ K LL K++RLDV+N R+ L+ N +I K
Sbjct: 408 NKKSLLGKIMRLDVDNPPRQSEIANQSLWGNYSIPK 443
>04_04_0095 - 22775340-22776017
Length = 225
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 175 GVRLRYHLRAGNSRHQAGGPSREVPCWSG 261
G+ +RY++ AG+ + + +REVPC G
Sbjct: 37 GLFVRYYVPAGDGKRRIRVDTREVPCGGG 65
>02_03_0041 + 14275897-14276370
Length = 157
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -1
Query: 312 ADATVGYPMDHESAATLATPARNFSRRSSGLMSRIAGAKMVPE 184
A+ G P+ E AT A RR+SG + +AG +PE
Sbjct: 88 AEEEDGVPVPGEVVATTADAQETRQRRNSGSNATVAGEDALPE 130
>07_01_0115 +
851505-852368,852611-852730,853000-853020,853253-853369,
853466-853555,853730-853837,853897-853932,853933-854022
Length = 481
Score = 27.9 bits (59), Expect = 2.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 224 PEDLREKFLAGVANVAALSWSIGYPTVASAPHSIANGFKNLLA 352
PE R F AG A V A +P A+A +S GF+ +A
Sbjct: 35 PEKKRASFAAGAAAVRAKVCDARWPASAAAANSAPYGFRGGVA 77
>04_01_0142 +
1640472-1640611,1641618-1641744,1642233-1642425,
1642793-1643349
Length = 338
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 217 HQAGGPSREVPCWSGQRGRALVVHRVPDGR 306
H AG P W G+R RA H +P GR
Sbjct: 13 HLAGQPPLLTAGWGGRRERARRSHAMPTGR 42
>06_03_0026 + 15623824-15624339
Length = 171
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 254 GVANVAALSWSIGYPTVASAPHSIANGFKNLL 349
GVA V+AL+W++GY A S G ++
Sbjct: 99 GVAGVSALAWTVGYIRRGGARGSGGGGVAGMI 130
>06_01_1023 -
7996240-7996369,7997166-7997260,7997430-7997515,
7998034-7998184
Length = 153
Score = 27.1 bits (57), Expect = 4.5
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Frame = +1
Query: 196 LRAGNSRHQAGGPSREVPCWSGQRGRAL----VVHRVPDGRVCA 315
+ AG R + GG P W G R RA+ + VP GR A
Sbjct: 7 VEAGRRRRRGGGSDPPSPMWGGGRRRAVSRRGKLVAVPVGRAAA 50
>03_01_0610 +
4478521-4478715,4480003-4480090,4480255-4480321,
4480561-4480679,4480809-4480904,4481019-4481074,
4481400-4481485,4481914-4482048,4482216-4482300
Length = 308
Score = 27.1 bits (57), Expect = 4.5
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = +2
Query: 158 GLVVKQVYDSGTIFAPAILDI--KPEDLREKFLAG-VANVAALSWSIGYPTVASAPHSIA 328
G ++V+D + L++ P KFLA + + + YP A A H I
Sbjct: 130 GAGTERVFDEVIQYNDGSLEVAFSPSKAMGKFLASELPRTTETTCKVLYPASAKAGHEIQ 189
Query: 329 NGFKN 343
NG N
Sbjct: 190 NGLSN 194
>10_06_0088 - 10538037-10539463,10539696-10539789
Length = 506
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +2
Query: 179 YDSGTIFAPAIL---DIKPEDLREKFLAGVANVAALSWSI 289
YD+G + + D+K D + + LAG+ NV AL S+
Sbjct: 31 YDTGVMSGAMLFIKEDLKTNDTQVQVLAGILNVCALVGSL 70
>07_03_1026 - 23369298-23370326
Length = 342
Score = 26.6 bits (56), Expect = 6.0
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -1
Query: 291 PMDHESAATLATPARNFSRRSSGLMSRIAGAKMVPESYTCLTTR 160
PMDH + T T R SSG S+ A ++ P T R
Sbjct: 41 PMDHPLSTTTTTKRRPEGEESSGAASQPAPERVNPTGTTTPAAR 84
>06_03_1442 -
30172595-30172606,30172607-30172684,30173034-30173435,
30173503-30173577,30173667-30173822,30173952-30174143,
30174202-30174208,30175866-30175918
Length = 324
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/51 (25%), Positives = 29/51 (56%)
Frame = +2
Query: 59 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAI 211
E++ +++P D G S +++ +++ P+S VV+ +Y+S + A I
Sbjct: 109 EMLPSGFLIRPSDG-GGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKI 158
>06_03_1439 -
30157110-30157121,30157122-30157199,30157549-30157950,
30158018-30158092,30158182-30158337,30158467-30158658,
30158717-30158723,30160381-30160433
Length = 324
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/51 (25%), Positives = 29/51 (56%)
Frame = +2
Query: 59 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAI 211
E++ +++P D G S +++ +++ P+S VV+ +Y+S + A I
Sbjct: 109 EMLPSGFLIRPSDG-GGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKI 158
>06_03_1427 -
30090464-30090475,30090476-30090553,30090903-30091304,
30091372-30091446,30091536-30091691,30091821-30092012,
30093735-30093908,30094966-30095123,30096738-30096914,
30096996-30097035
Length = 487
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/51 (25%), Positives = 29/51 (56%)
Frame = +2
Query: 59 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAI 211
E++ +++P D G S +++ +++ P+S VV+ +Y+S + A I
Sbjct: 272 EMLPSGFLIRPSDG-GGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKI 321
>06_03_1422 +
30058936-30058975,30059057-30059233,30060848-30061005,
30062063-30062236,30063959-30064150,30064280-30064435,
30064525-30064599,30064667-30065068,30065418-30065495,
30065840-30066173,30066275-30066339
Length = 616
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/51 (25%), Positives = 29/51 (56%)
Frame = +2
Query: 59 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAI 211
E++ +++P D G S +++ +++ P+S VV+ +Y+S + A I
Sbjct: 272 EMLPSGFLIRPSDG-GGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKI 321
>05_03_0155 - 9002049-9002134,9002825-9004139
Length = 466
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -1
Query: 249 RNFSRRSSGLMSRIAGAKMVPESYTCLTTRPYEKGEMFNMLR 124
+ F R +GL++R A P+SY R + F+M R
Sbjct: 187 KTFFWRHTGLLTRSAAGHGPPDSYAVAMLREHSNSGTFHMWR 228
>03_05_0291 - 22837412-22838128
Length = 238
Score = 26.6 bits (56), Expect = 6.0
Identities = 23/64 (35%), Positives = 27/64 (42%)
Frame = -1
Query: 279 ESAATLATPARNFSRRSSGLMSRIAGAKMVPESYTCLTTRPYEKGEMFNMLRRVASEAPT 100
E AAT A+PA + S SG S G V E C T P G+ +R E P
Sbjct: 127 EPAATTASPAASSSNSGSG--SGGGGGNKVHECSVCKKTFP--TGQALGGHKRCHYEGPI 182
Query: 99 LSPG 88
S G
Sbjct: 183 GSGG 186
>02_02_0528 +
11199799-11200470,11201850-11201951,11202858-11203487,
11204287-11204547
Length = 554
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 238 REVPCWSGQRGRALVVHRVP-DGRVCASFHRE 330
+EV CW GQR V DG++ S +RE
Sbjct: 349 KEVDCWKGQRSSKTSDFAVSNDGKLIISMNRE 380
>09_04_0695 -
19547101-19548010,19548089-19548587,19549461-19549728,
19551025-19551687,19551849-19552060,19552203-19552593,
19552659-19553107,19553454-19553790
Length = 1242
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 HEAFFQALSIPTKIS-KGTIEIINDVHILKPGDKVG 106
H +A P IS + + I+ ++ +LKPG+ VG
Sbjct: 599 HSKRLEARPSPVLISMRAQVRIMKEMRVLKPGEPVG 634
>04_04_0969 -
29787617-29787919,29788019-29788180,29788962-29789093,
29789708-29789760,29790518-29791007
Length = 379
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +2
Query: 185 SGTIFAPAILDIKP-EDLREKFLA 253
SGT F P I+ +KP ED+ K +A
Sbjct: 166 SGTSFTPHIITVKPNEDVASKIMA 189
>03_05_0598 + 26006027-26006746,26007992-26008094,26008847-26012394
Length = 1456
Score = 26.2 bits (55), Expect = 7.9
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 321 E*GADATVGYPMDHESAATLATPARNFSRRSSGLMSRIA 205
E A+ G P H S +T P R+SSGLM R +
Sbjct: 929 EVSAETVQGKPT-HSSISTSHIPVMGTPRKSSGLMGRFS 966
>03_02_0052 +
5285061-5285106,5285711-5285754,5286317-5286539,
5286664-5286827,5286918-5288144
Length = 567
Score = 26.2 bits (55), Expect = 7.9
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +1
Query: 127 QHVEHLSLFVWSCCQTGVR-LRYHLRAGNSRHQAGGPSREVPCWSGQRG 270
Q+ H +L W GV +R ++A AGG + + CWS +G
Sbjct: 96 QNDTHYTLSAWLQVSDGVADVRVVVKAAGDFIHAGGVAAKSGCWSMLKG 144
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,581,288
Number of Sequences: 37544
Number of extensions: 212358
Number of successful extensions: 631
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 566473892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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