Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_O04
(363 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 167 9e-42
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 167 9e-42
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 167 9e-42
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 167 9e-42
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 167 9e-42
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 167 9e-42
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 167 9e-42
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 167 9e-42
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 167 9e-42
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 167 9e-42
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 167 9e-42
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 167 9e-42
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 167 9e-42
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 167 9e-42
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 165 3e-41
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 164 9e-41
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 162 3e-40
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 131 7e-31
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 52 7e-07
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 52 7e-07
AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0 pr... 51 1e-06
BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog... 38 0.010
BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog... 38 0.010
AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protei... 38 0.010
AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolo... 38 0.010
AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens ... 38 0.010
AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal pr... 38 0.010
BC053670-1|AAH53670.1| 568|Homo sapiens CES3 protein protein. 33 0.21
AY358609-1|AAQ88972.1| 571|Homo sapiens carboxylesterase Hlo pr... 33 0.21
AK097538-1|BAC05093.1| 207|Homo sapiens protein ( Homo sapiens ... 33 0.21
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 31 0.83
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 31 0.83
BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 31 0.83
AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 31 0.83
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 31 0.83
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 0.83
AF088439-1|AAD29537.1| 42|Homo sapiens T-cell receptor beta ch... 31 1.5
AF088442-1|AAD29539.1| 43|Homo sapiens T-cell receptor beta ch... 29 3.4
AF088663-1|AAC96278.1| 45|Homo sapiens T-cell receptor beta ch... 29 4.5
AF051099-1|AAD15786.1| 217|Homo sapiens immunoglobulin G kappa ... 29 4.5
AF088675-1|AAC96290.1| 45|Homo sapiens T-cell receptor beta ch... 29 5.9
AF088414-1|AAD29515.1| 43|Homo sapiens T-cell receptor beta ch... 29 5.9
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 167 bits (406), Expect = 9e-42
Identities = 77/117 (65%), Positives = 98/117 (83%)
Frame = +2
Query: 8 AFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 187
+FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 188 GTIFAPAILDIKPEDLREKFLAGVANVAALSWSIGYPTVASAPHSIANGFKNLLAIA 358
G+I+ P +LDI E L +FL GV NVA++ IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 167 bits (406), Expect = 9e-42
Identities = 77/117 (65%), Positives = 98/117 (83%)
Frame = +2
Query: 8 AFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 187
+FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 188 GTIFAPAILDIKPEDLREKFLAGVANVAALSWSIGYPTVASAPHSIANGFKNLLAIA 358
G+I+ P +LDI E L +FL GV NVA++ IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 167 bits (406), Expect = 9e-42
Identities = 77/117 (65%), Positives = 98/117 (83%)
Frame = +2
Query: 8 AFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 187
+FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 188 GTIFAPAILDIKPEDLREKFLAGVANVAALSWSIGYPTVASAPHSIANGFKNLLAIA 358
G+I+ P +LDI E L +FL GV NVA++ IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 167 bits (406), Expect = 9e-42
Identities = 77/117 (65%), Positives = 98/117 (83%)
Frame = +2
Query: 8 AFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 187
+FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 188 GTIFAPAILDIKPEDLREKFLAGVANVAALSWSIGYPTVASAPHSIANGFKNLLAIA 358
G+I+ P +LDI E L +FL GV NVA++ IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 167 bits (406), Expect = 9e-42
Identities = 77/117 (65%), Positives = 98/117 (83%)
Frame = +2
Query: 8 AFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 187
+FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 188 GTIFAPAILDIKPEDLREKFLAGVANVAALSWSIGYPTVASAPHSIANGFKNLLAIA 358
G+I+ P +LDI E L +FL GV NVA++ IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 167 bits (406), Expect = 9e-42
Identities = 77/117 (65%), Positives = 98/117 (83%)
Frame = +2
Query: 8 AFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 187
+FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 188 GTIFAPAILDIKPEDLREKFLAGVANVAALSWSIGYPTVASAPHSIANGFKNLLAIA 358
G+I+ P +LDI E L +FL GV NVA++ IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 167 bits (406), Expect = 9e-42
Identities = 77/117 (65%), Positives = 98/117 (83%)
Frame = +2
Query: 8 AFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 187
+FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 188 GTIFAPAILDIKPEDLREKFLAGVANVAALSWSIGYPTVASAPHSIANGFKNLLAIA 358
G+I+ P +LDI E L +FL GV NVA++ IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 167 bits (406), Expect = 9e-42
Identities = 77/117 (65%), Positives = 98/117 (83%)
Frame = +2
Query: 8 AFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 187
+FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 188 GTIFAPAILDIKPEDLREKFLAGVANVAALSWSIGYPTVASAPHSIANGFKNLLAIA 358
G+I+ P +LDI E L +FL GV NVA++ IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 167 bits (406), Expect = 9e-42
Identities = 77/117 (65%), Positives = 98/117 (83%)
Frame = +2
Query: 8 AFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 187
+FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 188 GTIFAPAILDIKPEDLREKFLAGVANVAALSWSIGYPTVASAPHSIANGFKNLLAIA 358
G+I+ P +LDI E L +FL GV NVA++ IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 167 bits (406), Expect = 9e-42
Identities = 77/117 (65%), Positives = 98/117 (83%)
Frame = +2
Query: 8 AFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 187
+FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 188 GTIFAPAILDIKPEDLREKFLAGVANVAALSWSIGYPTVASAPHSIANGFKNLLAIA 358
G+I+ P +LDI E L +FL GV NVA++ IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 167 bits (406), Expect = 9e-42
Identities = 77/117 (65%), Positives = 98/117 (83%)
Frame = +2
Query: 8 AFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 187
+FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 188 GTIFAPAILDIKPEDLREKFLAGVANVAALSWSIGYPTVASAPHSIANGFKNLLAIA 358
G+I+ P +LDI E L +FL GV NVA++ IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 167 bits (406), Expect = 9e-42
Identities = 77/117 (65%), Positives = 98/117 (83%)
Frame = +2
Query: 8 AFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 187
+FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 188 GTIFAPAILDIKPEDLREKFLAGVANVAALSWSIGYPTVASAPHSIANGFKNLLAIA 358
G+I+ P +LDI E L +FL GV NVA++ IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 167 bits (406), Expect = 9e-42
Identities = 77/117 (65%), Positives = 98/117 (83%)
Frame = +2
Query: 8 AFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 187
+FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 188 GTIFAPAILDIKPEDLREKFLAGVANVAALSWSIGYPTVASAPHSIANGFKNLLAIA 358
G+I+ P +LDI E L +FL GV NVA++ IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 167 bits (406), Expect = 9e-42
Identities = 77/117 (65%), Positives = 98/117 (83%)
Frame = +2
Query: 8 AFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 187
+FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 188 GTIFAPAILDIKPEDLREKFLAGVANVAALSWSIGYPTVASAPHSIANGFKNLLAIA 358
G+I+ P +LDI E L +FL GV NVA++ IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 165 bits (402), Expect = 3e-41
Identities = 76/117 (64%), Positives = 98/117 (83%)
Frame = +2
Query: 8 AFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 187
+FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 188 GTIFAPAILDIKPEDLREKFLAGVANVAALSWSIGYPTVASAPHSIANGFKNLLAIA 358
G+I+ P +LDI E L +FL GV NVA++ IGYPTVAS PHSI NG++ +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYERVLALS 252
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 164 bits (398), Expect = 9e-41
Identities = 76/117 (64%), Positives = 97/117 (82%)
Frame = +2
Query: 8 AFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 187
+F QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFSQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 188 GTIFAPAILDIKPEDLREKFLAGVANVAALSWSIGYPTVASAPHSIANGFKNLLAIA 358
G+I+ P +LDI E L +FL GV NVA++ IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 162 bits (394), Expect = 3e-40
Identities = 75/117 (64%), Positives = 96/117 (82%)
Frame = +2
Query: 8 AFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 187
+FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 188 GTIFAPAILDIKPEDLREKFLAGVANVAALSWSIGYPTVASAPHSIANGFKNLLAIA 358
G+I+ P +LD E L +FL GV NVA++ GYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDKTEETLHSRFLEGVRNVASVCLQTGYPTVASVPHSIINGYKRVLALS 252
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 131 bits (316), Expect = 7e-31
Identities = 60/91 (65%), Positives = 75/91 (82%)
Frame = +2
Query: 86 KPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVAN 265
K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ P +LDI E L +FL GV N
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRN 61
Query: 266 VAALSWSIGYPTVASAPHSIANGFKNLLAIA 358
VA++ IGYPTVAS PHSI NG+K +LA++
Sbjct: 62 VASVCLQIGYPTVASVPHSIINGYKRVLALS 92
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 51.6 bits (118), Expect = 7e-07
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +2
Query: 248 LAGVANVAALSWSIGYPTVASAPHSIANGFKNLLAIA 358
+ GV NVA++ IGYPTVAS PHSI NG+K +LA++
Sbjct: 154 ILGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 190
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +2
Query: 8 AFFQALSIPTKISKGTIEII 67
+FFQAL I TKIS+GTIEI+
Sbjct: 136 SFFQALGITTKISRGTIEIL 155
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 51.6 bits (118), Expect = 7e-07
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +2
Query: 248 LAGVANVAALSWSIGYPTVASAPHSIANGFKNLLAIA 358
+ GV NVA++ IGYPTVAS PHSI NG+K +LA++
Sbjct: 153 ILGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 189
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +2
Query: 8 AFFQALSIPTKISKGTIEII 67
+FFQAL I TKIS+GTIEI+
Sbjct: 135 SFFQALGITTKISRGTIEIL 154
>AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0
protein.
Length = 93
Score = 51.2 bits (117), Expect = 1e-06
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +2
Query: 254 GVANVAALSWSIGYPTVASAPHSIANGFKNLLAIA 358
GV NVA++ IGYPTVAS PHSI NG+K +LA++
Sbjct: 1 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 35
>BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 37.9 bits (84), Expect = 0.010
Identities = 18/79 (22%), Positives = 38/79 (48%)
Frame = +2
Query: 5 EAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYD 184
E + L +PT + +G + +++D + K GD + +A +L + + + +K ++D
Sbjct: 150 EPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWD 209
Query: 185 SGTIFAPAILDIKPEDLRE 241
S + + D PE E
Sbjct: 210 SQSGRFQQMGDDLPESASE 228
>BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 37.9 bits (84), Expect = 0.010
Identities = 18/79 (22%), Positives = 38/79 (48%)
Frame = +2
Query: 5 EAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYD 184
E + L +PT + +G + +++D + K GD + +A +L + + + +K ++D
Sbjct: 150 EPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWD 209
Query: 185 SGTIFAPAILDIKPEDLRE 241
S + + D PE E
Sbjct: 210 SQSGRFQQMGDDLPESASE 228
>AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protein
PO-like protein.
Length = 239
Score = 37.9 bits (84), Expect = 0.010
Identities = 18/79 (22%), Positives = 38/79 (48%)
Frame = +2
Query: 5 EAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYD 184
E + L +PT + +G + +++D + K GD + +A +L + + + +K ++D
Sbjct: 150 EPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWD 209
Query: 185 SGTIFAPAILDIKPEDLRE 241
S + + D PE E
Sbjct: 210 SQSGRFQQMGDDLPESASE 228
>AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 37.9 bits (84), Expect = 0.010
Identities = 18/79 (22%), Positives = 38/79 (48%)
Frame = +2
Query: 5 EAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYD 184
E + L +PT + +G + +++D + K GD + +A +L + + + +K ++D
Sbjct: 150 EPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWD 209
Query: 185 SGTIFAPAILDIKPEDLRE 241
S + + D PE E
Sbjct: 210 SQSGRFQQMGDDLPESASE 228
>AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens
cDNA FLJ14663 fis, clone NT2RP2002862, weakly similar to
60S ACIDIC RIBOSOMAL PROTEIN P0. ).
Length = 239
Score = 37.9 bits (84), Expect = 0.010
Identities = 18/79 (22%), Positives = 38/79 (48%)
Frame = +2
Query: 5 EAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYD 184
E + L +PT + +G + +++D + K GD + +A +L + + + +K ++D
Sbjct: 150 EPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWD 209
Query: 185 SGTIFAPAILDIKPEDLRE 241
S + + D PE E
Sbjct: 210 SQSGRFQQMGDDLPESASE 228
>AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal
protein PO protein.
Length = 239
Score = 37.9 bits (84), Expect = 0.010
Identities = 18/79 (22%), Positives = 38/79 (48%)
Frame = +2
Query: 5 EAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYD 184
E + L +PT + +G + +++D + K GD + +A +L + + + +K ++D
Sbjct: 150 EPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWD 209
Query: 185 SGTIFAPAILDIKPEDLRE 241
S + + D PE E
Sbjct: 210 SQSGRFQQMGDDLPESASE 228
>BC053670-1|AAH53670.1| 568|Homo sapiens CES3 protein protein.
Length = 568
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +2
Query: 104 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSW 283
G++ ++++ L +SP + GL + + SG I P I+D P L +K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACSS 283
Query: 284 S 286
S
Sbjct: 284 S 284
>AY358609-1|AAQ88972.1| 571|Homo sapiens carboxylesterase Hlo
protein.
Length = 571
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +2
Query: 104 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSW 283
G++ ++++ L +SP + GL + + SG I P I+D P L +K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACSS 283
Query: 284 S 286
S
Sbjct: 284 S 284
>AK097538-1|BAC05093.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ40219 fis, clone TESTI2021637, moderately
similar to LIVER CARBOXYLESTERASE PRECURSOR (EC
3.1.1.1). ).
Length = 207
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +2
Query: 104 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSW 283
G++ ++++ L +SP + GL + + SG I P I+D P L +K +AN A S
Sbjct: 85 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACSS 140
Query: 284 S 286
S
Sbjct: 141 S 141
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 31.5 bits (68), Expect = 0.83
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 195 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 67
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 31.5 bits (68), Expect = 0.83
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 195 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 67
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 273 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 315
>BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein.
Length = 393
Score = 31.5 bits (68), Expect = 0.83
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 195 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 67
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1
protein.
Length = 417
Score = 31.5 bits (68), Expect = 0.83
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 195 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 67
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 31.5 bits (68), Expect = 0.83
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 195 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 67
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 31.5 bits (68), Expect = 0.83
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 195 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 67
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AF088439-1|AAD29537.1| 42|Homo sapiens T-cell receptor beta chain
protein.
Length = 42
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 166 CQTGVRLRYHLRAGNSRHQAGGPSREVP 249
CQ RLR LRAG+ H GP + VP
Sbjct: 14 CQHSSRLRAVLRAGHQAHGHRGPEKRVP 41
>AF088442-1|AAD29539.1| 43|Homo sapiens T-cell receptor beta chain
protein.
Length = 43
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 154 VWSCCQTGVRLRYHLRAGNSRHQAGGPSREVP 249
V+ C Q G R LRA ++ H+A GP + VP
Sbjct: 11 VFLCQQQGKGARAVLRARDTAHRARGPEKRVP 42
>AF088663-1|AAC96278.1| 45|Homo sapiens T-cell receptor beta chain
protein.
Length = 45
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 175 GVRLRYHLRAGNSRHQAGGPSREVP 249
GV LR LRAG+ H GP + VP
Sbjct: 20 GVNLRAVLRAGHQAHGPRGPEKRVP 44
>AF051099-1|AAD15786.1| 217|Homo sapiens immunoglobulin G kappa
chain protein.
Length = 217
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +2
Query: 143 SPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSWSIGYPTVASAPHS 322
SP+S+G K T+ AP++ P D E+ +G A+V L + YP A
Sbjct: 96 SPWSFGQGTKVEIKRTTVAAPSVFIFPPSD--EQLKSGTASVVCLLNNF-YPREAKVQWK 152
Query: 323 IANGFKN 343
+ N ++
Sbjct: 153 VDNALQS 159
>AF088675-1|AAC96290.1| 45|Homo sapiens T-cell receptor beta chain
protein.
Length = 45
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 145 SLFVWSCCQTGVRLRYHLRAGNSRHQAGGPSREVP 249
+L++ +G+ LR LRAG+ H GP + VP
Sbjct: 10 ALYLAPAVNSGMDLRAVLRAGHQAHGHRGPEKRVP 44
>AF088414-1|AAD29515.1| 43|Homo sapiens T-cell receptor beta chain
protein.
Length = 43
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 154 VWSCCQTGVRLRYHLRAGNSRHQAGGPSREVP 249
V+ C + G LR LRAG+ H GP + VP
Sbjct: 11 VFLCQRPGQILRAVLRAGHQAHGHRGPEKRVP 42
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,352,515
Number of Sequences: 237096
Number of extensions: 1104214
Number of successful extensions: 2909
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 2827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2909
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2248517154
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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