Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_O04
(363 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 173 2e-44
AL032663-5|CAA21765.1| 896|Caenorhabditis elegans Hypothetical ... 29 0.75
U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical p... 29 1.3
U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical p... 29 1.3
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z73898-7|CAA98070.1| 577|Caenorhabditis elegans Hypothetical pr... 27 4.0
AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical ... 27 4.0
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 26 7.0
U28992-2|AAA68390.1| 145|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical pr... 26 9.3
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 26 9.3
Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical pr... 26 9.3
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 173 bits (422), Expect = 2e-44
Identities = 75/118 (63%), Positives = 102/118 (86%)
Frame = +2
Query: 8 AFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 187
+FFQAL IPTKI++GTIEI+NDVH++K GDKVGASE+ LLNML ++PFSYGLVV+QVYD
Sbjct: 136 SFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTPFSYGLVVRQVYDD 195
Query: 188 GTIFAPAILDIKPEDLREKFLAGVANVAALSWSIGYPTVASAPHSIANGFKNLLAIAA 361
GT++ P +LD+ E+LR++FL+GV NVA++S ++ YPT+AS HS+ANG +N+L +AA
Sbjct: 196 GTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQNMLGVAA 253
>AL032663-5|CAA21765.1| 896|Caenorhabditis elegans Hypothetical
protein Y75B12B.6 protein.
Length = 896
Score = 29.5 bits (63), Expect = 0.75
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 282 HESAATLATPARNFSRRSSGLMSRIAGAKMVPESYTCLTTRPYEKGEM 139
HE AATL T + R GL+ K+ P+ Y T R E+ M
Sbjct: 119 HEFAATLFTVVQRVKREEHGLLYHFR-KKLAPKMYAAFTRRCIEEDIM 165
>U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical
protein F29B9.2b protein.
Length = 897
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 199 EDGTGVVHLFDNKTIRKGRDVQ-HVEKSSFRSSHLITRLQDM 77
ED GVV +F+N+ GR V+ + + + SHL R++++
Sbjct: 791 EDQKGVVQIFNNQCTSSGRKVKLNQNVADYCGSHLEARVEEI 832
>U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical
protein F29B9.2a protein.
Length = 910
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 199 EDGTGVVHLFDNKTIRKGRDVQ-HVEKSSFRSSHLITRLQDM 77
ED GVV +F+N+ GR V+ + + + SHL R++++
Sbjct: 804 EDQKGVVQIFNNQCTSSGRKVKLNQNVADYCGSHLEARVEEI 845
>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
protein ZK593.5 protein.
Length = 1326
Score = 27.5 bits (58), Expect = 3.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 285 DHESAATLATPARNFSRRSSGLMSRIAGAKMVPES 181
D + L PA + R+ S +MSR AG+K P S
Sbjct: 72 DASKRSGLKAPAASAIRKDSSVMSRSAGSKASPGS 106
>Z73898-7|CAA98070.1| 577|Caenorhabditis elegans Hypothetical
protein ZK822.5a protein.
Length = 577
Score = 27.1 bits (57), Expect = 4.0
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +2
Query: 23 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIF- 199
LSI +S G I IL+ GD+ A E L+ + P L + + SG +
Sbjct: 17 LSIGLSLSTGVYHAIKSRIILRRGDRT-AKEEYLMGGRQLPPLPVALSLLTTFLSGILML 75
Query: 200 -APAILDIKPEDLREKFLAGVAN 265
PA + + + F+ GVA+
Sbjct: 76 GVPAEMFQRGAQIWLNFVIGVAS 98
>AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical
protein Y51A2D.5 protein.
Length = 613
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 111 EAPTLSPGFRIWTSLIISIVPFEILVG 31
EAP L P +W +I+SI P VG
Sbjct: 56 EAPGLKPMGTVWKEVIVSITPGMAAVG 82
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 26.2 bits (55), Expect = 7.0
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +2
Query: 104 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALS 280
G S+ +L L+ +G V ++ D G++ A + + + R LAG A S
Sbjct: 570 GRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAATVKNPENSGFRTVVLAGAAKTGKTS 628
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 26.2 bits (55), Expect = 7.0
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +2
Query: 104 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALS 280
G S+ +L L+ +G V ++ D G++ A + + + R LAG A S
Sbjct: 570 GRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAATVKNPENSGFRTVVLAGAAKTGKTS 628
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 26.2 bits (55), Expect = 7.0
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +2
Query: 104 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALS 280
G S+ +L L+ +G V ++ D G++ A + + + R LAG A S
Sbjct: 504 GRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAATVKNPENSGFRTVVLAGAAKTGKTS 562
>U28992-2|AAA68390.1| 145|Caenorhabditis elegans Hypothetical
protein T05C1.2 protein.
Length = 145
Score = 26.2 bits (55), Expect = 7.0
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 14/70 (20%)
Frame = -1
Query: 348 SRFLKPFAME*GADATVGYPMDHESAATLAT------PA--RNFSRRSSG------LMSR 211
SRF K A + A GY M H + T+ T P+ R FS+ + L+S+
Sbjct: 63 SRFRKKMASQQDASPPTGYNMGHRHSLTIETNPLHLLPSNMRRFSQADTARHPAAPLLSK 122
Query: 210 IAGAKMVPES 181
+A + +PE+
Sbjct: 123 LAARQQIPEA 132
>Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical
protein Y53C12B.1 protein.
Length = 793
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/36 (27%), Positives = 16/36 (44%)
Frame = +1
Query: 226 GGPSREVPCWSGQRGRALVVHRVPDGRVCASFHRER 333
G P + V W + +VPD RV + R++
Sbjct: 181 GAPKKLVNTWKSHNSHITALLQVPDSRVVVALSRDQ 216
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
protein T01D3.7 protein.
Length = 2882
Score = 25.8 bits (54), Expect = 9.3
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -3
Query: 196 DGTGVVHLFDNKTIRKGRD-VQHVEKSSFRSSHLITRLQDMDIIDNFNSTL 47
DG + +N T + D VQH++ S + + D + ID STL
Sbjct: 564 DGNEKLIKMENSTFERNTDIVQHIQLGSCANLQMEKNRYDSNNIDGIGSTL 614
>Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical
protein T05A1.3 protein.
Length = 747
Score = 25.8 bits (54), Expect = 9.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 296 PTVASAPHSIANGFKNL 346
P V++ PHS+ GF+NL
Sbjct: 80 PKVSTPPHSLFQGFRNL 96
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,405,098
Number of Sequences: 27780
Number of extensions: 160940
Number of successful extensions: 508
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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