Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_O02
         (394 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       24   0.62 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   2.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    20   7.6  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.8 bits (49), Expect = 0.62
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 139 G*QSQPGVCGAQGWCRPSPGL 201
           G  S P +CG  G C   PG+
Sbjct: 30  GRNSAPSICGEHGHCVNLPGV 50


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -1

Query: 343 IILLVFKHILNLTD 302
           II++V  ++LNLTD
Sbjct: 247 IIIVVITYVLNLTD 260


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -2

Query: 258 LLVLGCILK 232
           LL++GCILK
Sbjct: 65  LLIVGCILK 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,535
Number of Sequences: 336
Number of extensions: 1477
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8330471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)