Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_O01
         (467 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   1.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   1.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   1.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   1.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.9  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       20   9.9  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    20   9.9  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 192 CICFYPGQRGVCEHSSQ 142
           CICF PG  G+   S++
Sbjct: 203 CICFVPGVLGLLSRSNK 219


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 192 CICFYPGQRGVCEHSSQ 142
           CICF PG  G+   S++
Sbjct: 203 CICFVPGVLGLLSRSNK 219


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 192 CICFYPGQRGVCEHSSQ 142
           CICF PG  G+   S++
Sbjct: 203 CICFVPGVLGLLSRSNK 219


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 192 CICFYPGQRGVCEHSSQ 142
           CICF PG  G+   S++
Sbjct: 203 CICFVPGVLGLLSRSNK 219


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 370  CWQEDCCRGSA 402
            CWQ DC +G A
Sbjct: 1949 CWQVDCNKGPA 1959



 Score = 21.4 bits (43), Expect = 4.3
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 370  CWQEDCCRG 396
            CWQ DC +G
Sbjct: 1524 CWQVDCKKG 1532



 Score = 21.4 bits (43), Expect = 4.3
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 370  CWQEDCCRG 396
            CWQ DC +G
Sbjct: 2447 CWQVDCNKG 2455


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 412 RLSKPSLCNNLLASNRPVQ 356
           RL    LC    +SNRP Q
Sbjct: 168 RLRSCDLCQKTKSSNRPHQ 186


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 235 MLPVKLHTHALRVITLS 285
           M  VKLH H + +I LS
Sbjct: 1   MPQVKLHKHYVPIILLS 17


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,630
Number of Sequences: 336
Number of extensions: 2325
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)