Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_N24
         (441 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...   137   2e-34
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         26   0.68 
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    25   1.2  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   3.6  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   4.8  
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    22   8.4  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score =  137 bits (331), Expect = 2e-34
 Identities = 61/89 (68%), Positives = 73/89 (82%)
 Frame = +1

Query: 175 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 354
           LFEKR KN+ IGQ++QP RDLSRFV+WPKYIRIQR +A+LQ+RLK+PPPINQFTQTLDK 
Sbjct: 37  LFEKRVKNYGIGQNVQPKRDLSRFVKWPKYIRIQRHRAILQKRLKIPPPINQFTQTLDKP 96

Query: 355 TAKGLFKILEKYRPETEAVRKERLKKAAE 441
           TA+ + K  +KYRPE    R +RLK  AE
Sbjct: 97  TAQQVMKCWKKYRPENPIARVQRLKAKAE 125


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.8 bits (54), Expect = 0.68
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 264 YSHPASKGCVTASSQSAAANQPVHP 338
           + HP   G + A SQ     QPVHP
Sbjct: 165 HHHPGLTGLMQAPSQQQQHLQPVHP 189


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = +1

Query: 253 WPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPE 399
           W  ++    +    + RLKV     + T+T+++  A+ +   L ++RPE
Sbjct: 216 WKLFLMTSYRSVARKLRLKVCS--RELTETVERVAAEAINSKLHEHRPE 262


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 105 DREKSSGRSTCGEES*AQEDCKPS 176
           DR ++ GRS C   S +  D +PS
Sbjct: 884 DRSEAGGRSLCTNGSSSGRDSQPS 907


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = +2

Query: 245 SCDGRNIFASSVK--RLCYSVVSKCRRQSTSSPRH*IKPQPKVCSRSWRNTGQKLRQS 412
           S D  ++  + ++  R  + +  + RR    SP H  KP+ +   R W+  GQ L +S
Sbjct: 204 SVDSSSVLGNGIQLHRHQHQLQPQQRRFHRQSPAHRRKPRWRRAGRRWK-VGQFLPES 260


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +1

Query: 232 DLSRFVRWPKYIRIQRQKAVLQRRLKVPPP 321
           D++R++ W K I+  R  A+  ++L+ P P
Sbjct: 343 DVARWLEWRKKIKEYRMTAM--KKLQPPKP 370


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 432,378
Number of Sequences: 2352
Number of extensions: 7839
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36993357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)