Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_N22
(489 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242; Eukary... 210 9e-54
UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA - ... 199 2e-50
UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23; Fungi... 171 5e-42
UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1; Echinoco... 171 7e-42
UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11; Ascom... 171 9e-42
UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19; Magno... 162 4e-39
UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6; Eukaryo... 158 5e-38
UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin re... 143 2e-33
UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lambl... 140 2e-32
UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=1... 129 3e-29
UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40 ribo... 128 7e-29
UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, who... 127 2e-28
UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7; Trich... 126 3e-28
UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa pro... 117 2e-25
UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1; ... 113 2e-24
UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n... 107 1e-22
UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillar... 104 1e-21
UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1; E... 102 5e-21
UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13; Archae... 93 2e-18
UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2; Thermop... 88 9e-17
UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 88 1e-16
UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 88 1e-16
UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:... 83 3e-15
UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole geno... 80 2e-14
UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12; Euryar... 77 3e-13
UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1; ... 74 2e-12
UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n... 66 3e-10
UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga m... 66 4e-10
UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S riboso... 62 6e-09
UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD l... 60 2e-08
UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal ... 60 3e-08
UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila melanogaster|... 57 2e-07
UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:... 57 2e-07
UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1; ... 56 3e-07
UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella nat... 56 4e-07
UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2; Thermoprotei... 55 1e-06
UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa... 53 4e-06
UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep: L... 42 0.010
UniRef50_UPI00005A3143 Cluster: PREDICTED: similar to 40S riboso... 37 0.28
UniRef50_Q6C1V9 Cluster: Yarrowia lipolytica chromosome F of str... 35 0.84
UniRef50_Q9W2T1 Cluster: CG9817-PA; n=1; Drosophila melanogaster... 33 2.6
UniRef50_UPI000023ED36 Cluster: hypothetical protein FG06308.1; ... 33 3.4
UniRef50_Q67Q95 Cluster: Putative uncharacterized protein; n=1; ... 33 3.4
UniRef50_UPI0000E4908F Cluster: PREDICTED: similar to Ncoa6 prot... 32 6.0
UniRef50_A7PZX1 Cluster: Chromosome chr15 scaffold_40, whole gen... 32 6.0
UniRef50_Q9M8M2 Cluster: Putative uncharacterized protein T21F11... 32 7.9
UniRef50_Q8SZ38 Cluster: RE18076p; n=1; Drosophila melanogaster|... 32 7.9
UniRef50_Q55F37 Cluster: Putative MADS-box transcription factor;... 32 7.9
>UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242;
Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens
(Human)
Length = 295
Score = 210 bits (514), Expect = 9e-54
Identities = 100/143 (69%), Positives = 113/143 (79%)
Frame = +1
Query: 58 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 237
MSG LD+L + EEDV K LAA THLG N++FQME Y+YKR+ DG ++INL+RTWEK
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 238 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 417
E+PADV VISSR GQRAVLKFAA TGATPIAGRFTPG FTNQIQAAFREPR
Sbjct: 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120
Query: 418 LLIV*DPAQDHQPITEASYVNIP 486
LL+V DP DHQP+TEASYVN+P
Sbjct: 121 LLVVTDPRADHQPLTEASYVNLP 143
>UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA -
Suberites domuncula (Sponge)
Length = 325
Score = 199 bits (486), Expect = 2e-50
Identities = 93/144 (64%), Positives = 113/144 (78%)
Frame = +1
Query: 58 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 237
MSGGL++L++ E+DVTK+LAA THLG NV+ QM YV+K +GDG +IN+R+TWEK
Sbjct: 1 MSGGLEVLSMKEDDVTKLLAAGTHLGDSNVDIQMAQYVFKTKGDGVPIINVRKTWEKLLL 60
Query: 238 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 417
E+PADV V++++ FGQRA+LKFA +TGA PIAGRFTPG FTNQIQ AFREPR
Sbjct: 61 AARVIAAIENPADVCVLANKPFGQRAILKFAHYTGAFPIAGRFTPGTFTNQIQKAFREPR 120
Query: 418 LLIV*DPAQDHQPITEASYVNIPV 489
LLIV D DHQPITEA+YVNIPV
Sbjct: 121 LLIVSDARSDHQPITEAAYVNIPV 144
>UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23;
Fungi/Metazoa group|Rep: 40S ribosomal protein S0-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 252
Score = 171 bits (417), Expect = 5e-42
Identities = 84/135 (62%), Positives = 94/135 (69%)
Frame = +1
Query: 85 LSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXE 264
L+ ED +LAA THLGA NV E YV+ R DG HVIN+ +TWEK
Sbjct: 9 LTPEDAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIP 68
Query: 265 DPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV*DPAQ 444
+P DV ISSR FGQRAVLKFAAHTGATPIAGRFTPG+FTN I +F+EPRL+IV DP
Sbjct: 69 NPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRS 128
Query: 445 DHQPITEASYVNIPV 489
D Q I EASYVNIPV
Sbjct: 129 DAQAIKEASYVNIPV 143
>UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1;
Echinococcus granulosus|Rep: 40S ribosomal protein SA -
Echinococcus granulosus
Length = 268
Score = 171 bits (416), Expect = 7e-42
Identities = 78/144 (54%), Positives = 98/144 (68%)
Frame = +1
Query: 58 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 237
MSGG++ L L E+D+ M+AA HLG+ N N+QM+ YVY R +G H+I+L +TWEK
Sbjct: 1 MSGGIEALELKEDDIRLMVAAKVHLGSTNANYQMQQYVYDRNDEGNHIIHLNKTWEKLLL 60
Query: 238 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 417
E+PADV +I + QR LKF +TG T + GRFTPGAFTNQIQ+ F+EPR
Sbjct: 61 AARAICAIENPADVVIIGGQPTWQRGALKFGHYTGTTSVPGRFTPGAFTNQIQSGFKEPR 120
Query: 418 LLIV*DPAQDHQPITEASYVNIPV 489
LLIV DP DHQP+ E S VNIPV
Sbjct: 121 LLIVCDPKGDHQPVREGSAVNIPV 144
>UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11;
Ascomycota|Rep: 40S ribosomal protein S0-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 292
Score = 171 bits (415), Expect = 9e-42
Identities = 78/142 (54%), Positives = 103/142 (72%)
Frame = +1
Query: 64 GGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXX 243
G ++L ++ED+ ++LAA H+G++N+ +M+ YV+KRR DG H++NL +TWEK
Sbjct: 5 GRPNILNATDEDIKQLLAANCHIGSKNLEVRMDNYVWKRRSDGVHILNLGKTWEKLVLAA 64
Query: 244 XXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLL 423
E+PADV V+S+R +G RAVLKFAAHTGAT IAGRFTPG FTN I +REPRL+
Sbjct: 65 RVIATIENPADVCVVSTRTYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLI 124
Query: 424 IV*DPAQDHQPITEASYVNIPV 489
+V DP D Q I EAS+VNIPV
Sbjct: 125 VVTDPRADAQAIKEASFVNIPV 146
>UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19;
Magnoliophyta|Rep: 40S ribosomal protein Sa-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 298
Score = 162 bits (393), Expect = 4e-39
Identities = 76/137 (55%), Positives = 93/137 (67%)
Frame = +1
Query: 79 LALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXX 258
L+ E DV M AA HLG +N N+QME YV+KRR DG ++ NL +TWEK
Sbjct: 12 LSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVA 71
Query: 259 XEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV*DP 438
E+P D+ V S+R +GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F EPRLLI+ DP
Sbjct: 72 IENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTDP 131
Query: 439 AQDHQPITEASYVNIPV 489
DHQPI E + NIP+
Sbjct: 132 RTDHQPIKEGALGNIPI 148
>UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6;
Eukaryota|Rep: B1056G08.113 gene product - Ostreococcus
tauri
Length = 313
Score = 158 bits (384), Expect = 5e-38
Identities = 73/136 (53%), Positives = 94/136 (69%)
Frame = +1
Query: 79 LALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXX 258
++ E D+ MLAA HLG +NV+FQME YV+KRR DG H+INL +TW+K
Sbjct: 31 MSQKEADIAMMLAAGCHLGTKNVDFQMERYVWKRRADGIHIINLGKTWDKLMLAARVIVA 90
Query: 259 XEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV*DP 438
E+P DV ++R +GQRAVLKFA +TGA +AGR TPG +TNQ A F EPR+L+V DP
Sbjct: 91 VENPQDVIAQAARPYGQRAVLKFAQYTGAKALAGRHTPGTYTNQKDAVFAEPRVLVVTDP 150
Query: 439 AQDHQPITEASYVNIP 486
D QPI+E ++VNIP
Sbjct: 151 RTDAQPISETAFVNIP 166
>UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin
receptor; n=3; Entamoeba histolytica|Rep: Ribosomal
protein SA (P40) / laminin receptor - Entamoeba
histolytica
Length = 173
Score = 143 bits (346), Expect = 2e-33
Identities = 67/140 (47%), Positives = 88/140 (62%), Gaps = 2/140 (1%)
Frame = +1
Query: 73 DLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXX 252
D+L S ED+ M+A H+GA N+NF ME YVY+R + + NL +TWEK
Sbjct: 15 DILKPSAEDIKMMVACRVHIGATNLNFAMEEYVYERGNNNECIFNLMKTWEKLSLAARVI 74
Query: 253 XXX--EDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLI 426
E P+DV ++ R RA LKF +TG T +AGRFTPG+FTNQIQ F EPRL+I
Sbjct: 75 AGISNETPSDVVAVAGREMAHRASLKFMKYTGCTAVAGRFTPGSFTNQIQKKFMEPRLII 134
Query: 427 V*DPAQDHQPITEASYVNIP 486
V DP+ DHQ + E+ Y+N+P
Sbjct: 135 VSDPSVDHQALRESGYINVP 154
>UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_16528_17265 - Giardia lamblia
ATCC 50803
Length = 245
Score = 140 bits (339), Expect = 2e-32
Identities = 66/134 (49%), Positives = 87/134 (64%)
Frame = +1
Query: 85 LSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXE 264
L E DV KML ATTHLG N++ +M+ Y++ R+ DGT V NL++ W K +
Sbjct: 15 LKEADVKKMLVATTHLGVRNIDRRMQFYIFDRQKDGTFVFNLQKVWAKIVFAARILVTID 74
Query: 265 DPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV*DPAQ 444
DPA++ V+++R QRA+LKF +T AT GRF PG FTN++ + EPRLL+V DP
Sbjct: 75 DPAEIAVVANRPDAQRAILKFCKYTHATAFPGRFIPGNFTNRMNPNYCEPRLLLVNDPVV 134
Query: 445 DHQPITEASYVNIP 486
D Q I EASYVNIP
Sbjct: 135 DRQAILEASYVNIP 148
>UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=11;
Apicomplexa|Rep: 40S ribosomal protein SA, putative -
Theileria parva
Length = 274
Score = 129 bits (312), Expect = 3e-29
Identities = 63/144 (43%), Positives = 85/144 (59%)
Frame = +1
Query: 58 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 237
M+ L E+ + ML A H+G +NV +M YVY R +G H+INL T EK
Sbjct: 1 MAAPTSKLTPDEDSIRMMLTAKVHIGTKNVENKMRKYVYSRTQEGVHLINLAHTLEKLKV 60
Query: 238 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 417
+P +V V+S+R +G RAVLKF+ + G+ PIAGR+ PG TNQI F EPR
Sbjct: 61 AARAIVTVSNPEEVVVVSARPYGSRAVLKFSHYVGSHPIAGRWIPGTLTNQITQKFIEPR 120
Query: 418 LLIV*DPAQDHQPITEASYVNIPV 489
LL+ DP D Q + E+SYV++PV
Sbjct: 121 LLVATDPRTDAQSLRESSYVSLPV 144
>UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40
ribosome associated-like protein; n=7; Trypanosoma|Rep:
Laminin receptor-like protein/ p40 ribosome
associated-like protein - Trypanosoma cruzi
Length = 298
Score = 128 bits (309), Expect = 7e-29
Identities = 62/131 (47%), Positives = 82/131 (62%)
Frame = +1
Query: 97 DVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPAD 276
DV K++A H G +N + M+ Y++ R +GT++I+L TWEK E+P D
Sbjct: 34 DVQKLVAMHCHFGTKNRSNAMKKYIHSRTKEGTNIIDLHMTWEKLILAARVIAAVENPQD 93
Query: 277 VFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV*DPAQDHQP 456
V V S+R FGQRA+ KF+ G + +AGRF PG FTNQIQ F +PR+L+V DP D Q
Sbjct: 94 VTVCSTRLFGQRAIFKFSQLVGMSFLAGRFIPGTFTNQIQKKFMQPRVLLVTDPRTDQQA 153
Query: 457 ITEASYVNIPV 489
EAS VNIPV
Sbjct: 154 FREASLVNIPV 164
>UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 268
Score = 127 bits (306), Expect = 2e-28
Identities = 63/143 (44%), Positives = 91/143 (63%), Gaps = 4/143 (2%)
Frame = +1
Query: 73 DLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXX 252
D ++ E+D+ +++A+ H+G + ++F M+ YV R +G++++NL TW+
Sbjct: 31 DCMSRKEQDIKRLIASQCHVGTKQLHFDMKRYVSHRSDNGSYILNLEETWQHIKLAARVI 90
Query: 253 XXXEDPADVFVISSRAFGQRAVLKFAAHTGATPI-AGRFTPGAFTNQIQAA---FREPRL 420
E P DV V+SSR GQRAV+KFA +T A+ + R+TPG TNQ +A F+EP+L
Sbjct: 91 AAIEQPQDVMVVSSRPIGQRAVIKFAHYTQASSTRSARWTPGTLTNQSNSASGKFQEPQL 150
Query: 421 LIV*DPAQDHQPITEASYVNIPV 489
LIV DP D Q I EASYVNIPV
Sbjct: 151 LIVTDPHLDRQAIVEASYVNIPV 173
>UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 256
Score = 126 bits (303), Expect = 3e-28
Identities = 68/136 (50%), Positives = 83/136 (61%), Gaps = 1/136 (0%)
Frame = +1
Query: 82 ALSEEDVTKM-LAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXX 258
A E V KM LAA +LG+ N++F M+ YV+ R DGTHVINL T+EK
Sbjct: 6 AADREAVIKMMLAAKVYLGSTNLSFGMKPYVFTCRKDGTHVINLAMTYEKIKLAARMIYA 65
Query: 259 XEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV*DP 438
E+P DV IS+++FG RAV KFA GA + RFTPG FTN F EPRL+IV DP
Sbjct: 66 VEEPKDVLAISTKSFGTRAVHKFAEFLGANYVEQRFTPGLFTNYSIKNFCEPRLMIVCDP 125
Query: 439 AQDHQPITEASYVNIP 486
D Q + EA+Y NIP
Sbjct: 126 NTDSQAVHEAAYANIP 141
>UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa
protein; n=4; Eutheria|Rep: PREDICTED: similar to 33 kDa
protein - Pan troglodytes
Length = 355
Score = 117 bits (281), Expect = 2e-25
Identities = 58/75 (77%), Positives = 63/75 (84%)
Frame = +1
Query: 262 EDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV*DPA 441
E+ ADV VISSR GQRAVLKFAA TGATPIAG FTPG FT+QIQAAFREPRL +V DP
Sbjct: 149 ENLADVSVISSRNTGQRAVLKFAAATGATPIAGCFTPGTFTSQIQAAFREPRLPVVTDPR 208
Query: 442 QDHQPITEASYVNIP 486
DHQP+ EASYVN+P
Sbjct: 209 VDHQPLMEASYVNLP 223
Score = 33.1 bits (72), Expect = 3.4
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +1
Query: 55 TMSGGLDLLALSEEDVTKMLAATTH 129
TM G D+L ++EEDV K LAA TH
Sbjct: 110 TMFGAPDVLQMNEEDVLKFLAARTH 134
>UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 280
Score = 113 bits (273), Expect = 2e-24
Identities = 54/100 (54%), Positives = 67/100 (67%)
Frame = +1
Query: 190 GTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFT 369
G +INL +TWEK E+P D+ V S+R +GQRAVLKFA +TGA IAGR T
Sbjct: 46 GIFIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHT 105
Query: 370 PGAFTNQIQAAFREPRLLIV*DPAQDHQPITEASYVNIPV 489
PG FTNQ+Q +F EPRLLI+ DP DHQPI E++ P+
Sbjct: 106 PGTFTNQLQTSFSEPRLLILTDPRTDHQPIKESALETSPL 145
>UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB0B97 UniRef100
entry - Canis familiaris
Length = 258
Score = 107 bits (257), Expect = 1e-22
Identities = 57/125 (45%), Positives = 79/125 (63%)
Frame = +1
Query: 109 MLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVI 288
+L A THLG N +F+M +YKR +G ++NL R++EK + P++V VI
Sbjct: 1 LLVAGTHLGDTNPDFKMIHSIYKRETNG--ILNLERSYEKLLPVACTIVAVKHPSEVGVI 58
Query: 289 SSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV*DPAQDHQPITEA 468
SSR GQ A+LK AA +GA+P G FT G FT+Q+QA+ RE LL++ DP DH + EA
Sbjct: 59 SSRNSGQWAMLKLAAASGASPTVGHFTSGTFTSQVQASCRELCLLLITDPRADHPFLMEA 118
Query: 469 SYVNI 483
YVN+
Sbjct: 119 PYVNL 123
>UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillardia
theta|Rep: 40S ribosomal protein SSA - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 104 bits (249), Expect = 1e-21
Identities = 50/134 (37%), Positives = 72/134 (53%)
Frame = +1
Query: 88 SEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXED 267
+E D+ K+L H+G M+ YV+K+R DG ++IN+ +T +K E
Sbjct: 4 NENDIKKLLICNVHIGLSACTQLMKVYVWKKRSDGIYIINILKTIQKIELAARAIISIEH 63
Query: 268 PADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV*DPAQD 447
P + +SS Q A++KF+ I ++ PG TN+ F EPRLLI+ DP D
Sbjct: 64 PKHIIAVSSNNIHQTAIIKFSQFIQCNCIVDKWIPGKLTNKTSKLFEEPRLLIISDPLLD 123
Query: 448 HQPITEASYVNIPV 489
Q + EASYVNIPV
Sbjct: 124 KQALLEASYVNIPV 137
>UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN SA
or P40 - Encephalitozoon cuniculi
Length = 252
Score = 102 bits (244), Expect = 5e-21
Identities = 50/139 (35%), Positives = 77/139 (55%), Gaps = 1/139 (0%)
Frame = +1
Query: 73 DLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRG-DGTHVINLRRTWEKXXXXXXX 249
D + + +E V ++ + +HLG + N Y+Y R D ++I++ TWEK
Sbjct: 10 DSIKIPDEFVKLLIVSQSHLGGTSTNKSFARYLYGTRPRDRINIIDINATWEKLIIAARA 69
Query: 250 XXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV 429
+ P+ + V+S++ FG++ V+KF GATPI GRF PG+FTN +PR+LIV
Sbjct: 70 FCGIKHPSSIAVVSTKTFGRKPVVKFCEAVGATPITGRFIPGSFTNSEVKRVYDPRVLIV 129
Query: 430 *DPAQDHQPITEASYVNIP 486
D D Q I E+ Y N+P
Sbjct: 130 SDTYADKQAILESQYCNLP 148
>UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13;
Archaea|Rep: 30S ribosomal protein S2P - Sulfolobus
solfataricus
Length = 231
Score = 93.5 bits (222), Expect = 2e-18
Identities = 47/130 (36%), Positives = 73/130 (56%)
Frame = +1
Query: 100 VTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADV 279
V L+A H+G + ME++VY+ R +G +V+++R+ E+ DP D+
Sbjct: 39 VDTYLSAGVHIGTHSCTKYMESFVYRVRAEGLYVLDVRKIDERLRIAAKFLSRY-DPQDI 97
Query: 280 FVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV*DPAQDHQPI 459
V++SR + R V KFA G+ + GR PG FTN + + EP++L+V DP D Q I
Sbjct: 98 IVVASRPYAYRPVQKFAEVVGSRALVGRIIPGTFTNPYLSTYIEPKVLLVSDPRTDTQAI 157
Query: 460 TEASYVNIPV 489
EA+ V IP+
Sbjct: 158 KEAAKVGIPI 167
>UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2;
Thermoplasma|Rep: 30S ribosomal protein S2P -
Thermoplasma acidophilum
Length = 199
Score = 88.2 bits (209), Expect = 9e-17
Identities = 46/137 (33%), Positives = 75/137 (54%)
Frame = +1
Query: 79 LALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXX 258
+ + EE+ K + H+G + + M+ Y++K R DG +++++++T K
Sbjct: 5 MLIPEEEYQK---SGVHIGTQVKSSDMKPYIFKIRNDGLYILDVKKTNSKLIVAGKMLAR 61
Query: 259 XEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV*DP 438
E P D+ V++ R + R V KFA TGAT I GRF PG TN ++E +++IV DP
Sbjct: 62 FE-PQDILVVAQRQYAFRPVAKFAEVTGATAITGRFNPGTLTNPSLKFYKEVKVIIVTDP 120
Query: 439 AQDHQPITEASYVNIPV 489
D Q + EA + IP+
Sbjct: 121 LADVQAMKEAVKIGIPI 137
>UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanococcus jannaschii
Length = 222
Score = 87.8 bits (208), Expect = 1e-16
Identities = 40/126 (31%), Positives = 67/126 (53%)
Frame = +1
Query: 112 LAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVIS 291
LA+ H+G + ME ++Y+ R DG +V+++R+T E+ E P D+ +S
Sbjct: 14 LASGIHIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLARYE-PEDILAVS 72
Query: 292 SRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV*DPAQDHQPITEAS 471
R + + +F +TG +AGRF PG TN F EP ++ + DP D Q + EA+
Sbjct: 73 RRIYTMGPLEEFGKYTGIRTVAGRFVPGTLTNPAYKGFMEPEVVFISDPRVDRQALKEAT 132
Query: 472 YVNIPV 489
+ +P+
Sbjct: 133 EIGVPI 138
>UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanosarcina acetivorans
Length = 225
Score = 87.8 bits (208), Expect = 1e-16
Identities = 47/130 (36%), Positives = 70/130 (53%)
Frame = +1
Query: 100 VTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADV 279
+ + LAA H+G + M +VY+ R DG +V++++ T E+ DPA +
Sbjct: 40 IDEYLAAGVHIGTQQKTQDMMRFVYRVRTDGLYVLDIQSTDERIRVASKLLSHY-DPARI 98
Query: 280 FVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV*DPAQDHQPI 459
V+SSR +GQ F+ G + GRF PG+ TN F EP ++IV DPA D Q +
Sbjct: 99 LVVSSRQYGQHPARMFSRALGTRAMLGRFIPGSLTNPQIHGFFEPDVIIVTDPAGDAQVL 158
Query: 460 TEASYVNIPV 489
EAS + +PV
Sbjct: 159 KEASSIGVPV 168
>UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:
Ribosomal protein S2 - Thermofilum pendens (strain Hrk
5)
Length = 214
Score = 83.0 bits (196), Expect = 3e-15
Identities = 44/126 (34%), Positives = 66/126 (52%)
Frame = +1
Query: 112 LAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVIS 291
LAA +G + + ME ++Y R DG +++++++T E+ DP+ V+S
Sbjct: 21 LAAGIRIGTKMKSKFMEPFIYSARPDGLYLLDVKKTDERIRIAAKMIARY-DPSKFVVVS 79
Query: 292 SRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV*DPAQDHQPITEAS 471
R +G R V KF G P+ GR PG FTN + F E L++V DP D Q + EA
Sbjct: 80 GRQYGHRPVRKFCGLVGCKPMLGRVLPGTFTNPALSHFTEADLMMVTDPRVDEQAVVEAG 139
Query: 472 YVNIPV 489
+ IPV
Sbjct: 140 TMGIPV 145
>UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 201
Score = 80.2 bits (189), Expect = 2e-14
Identities = 38/62 (61%), Positives = 44/62 (70%)
Frame = +1
Query: 301 FGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV*DPAQDHQPITEASYVN 480
F Q A+LKFA +TGA IAGR TPG TNQ+Q +F EP LLI+ DP DHQPI E + N
Sbjct: 33 FQQGAILKFAQYTGAHAIAGRHTPGTLTNQLQTSFSEPYLLILTDPITDHQPIKEVALGN 92
Query: 481 IP 486
IP
Sbjct: 93 IP 94
>UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 267
Score = 76.6 bits (180), Expect = 3e-13
Identities = 44/130 (33%), Positives = 63/130 (48%)
Frame = +1
Query: 100 VTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADV 279
V L A H+G + ME ++++ R DG +V+++ T E+ E P +
Sbjct: 82 VEDYLGAGVHIGTQQKTQDMERFIHRVRTDGLYVLDVSMTDERIRTAADFLSNYE-PEQI 140
Query: 280 FVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV*DPAQDHQPI 459
SSR +G+ KFA GA GRF PG TN + EP +++V DP D Q +
Sbjct: 141 LAASSRQYGRFPAEKFAEAIGARVRTGRFIPGTLTNPDYDGYIEPDIVVVTDPIGDAQAV 200
Query: 460 TEASYVNIPV 489
EA V IPV
Sbjct: 201 KEAITVGIPV 210
>UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 251
Score = 73.7 bits (173), Expect = 2e-12
Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Frame = +1
Query: 175 KRRGDGTHVINLRRTWEKXXXXXXXXXXX---EDPADVFVISSRAFGQRAVLKFAAHTGA 345
+R+ DG+ I + WEK ++PA++ V+SSR + AVL FA TGA
Sbjct: 12 RRQADGSFSIG--KKWEKIIFAARILATVVTLKNPAEIPVVSSRQYDYCAVLTFAGQTGA 69
Query: 346 TPIAGRFTPGAFTNQIQAAFREPRLLIV*DPAQDHQPITEASYVNIPV 489
IA RFTPG+ TN + F+E R++IV DP HQ + +A +V+I +
Sbjct: 70 INIADRFTPGSSTNYVTRWFKETRVIIVIDPHVSHQAMHKALFVDIAI 117
>UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1146 UniRef100
entry - Canis familiaris
Length = 222
Score = 66.5 bits (155), Expect = 3e-10
Identities = 36/90 (40%), Positives = 48/90 (53%)
Frame = +1
Query: 127 HLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFG 306
HL N + Q++ YVYK++ DG +VIN + V SSR G
Sbjct: 1 HLDGTNFDLQIDEYVYKKKRDGMYVIN-----RSFCSQLEPLLPLKTQLMSVVTSSRTTG 55
Query: 307 QRAVLKFAAHTGATPIAGRFTPGAFTNQIQ 396
Q+AVL FAA G+ P +GRFTPG T+Q+Q
Sbjct: 56 QQAVLSFAAAVGSAPTSGRFTPGTLTDQVQ 85
>UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S2 -
Caldivirga maquilingensis IC-167
Length = 215
Score = 66.1 bits (154), Expect = 4e-10
Identities = 42/132 (31%), Positives = 59/132 (44%), Gaps = 2/132 (1%)
Frame = +1
Query: 100 VTKMLAATTHLGAENVN--FQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPA 273
V + +AA LGA N Q +++ R DG + NL+R E+ P+
Sbjct: 18 VERYMAAAVRLGARVSNNYLQERGFIFSVRPDGLRIFNLKRIDERIRIAARMITRYP-PS 76
Query: 274 DVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV*DPAQDHQ 453
V V S++ + + + F G P+ GR PG TN + LL+V DP D Q
Sbjct: 77 RVMVHSTKPYAFKPIQMFCKFVGCLPVTGRLIPGTLTNPYLTHHIDIDLLMVADPKTDFQ 136
Query: 454 PITEASYVNIPV 489
I EAS IPV
Sbjct: 137 AINEASLTGIPV 148
>UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1; Homo
sapiens|Rep: PREDICTED: similar to 40S ribosomal protein
SA (p40) (34/67 kDa laminin receptor) - Homo sapiens
Length = 99
Score = 62.1 bits (144), Expect = 6e-09
Identities = 30/45 (66%), Positives = 32/45 (71%)
Frame = +1
Query: 316 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV*DPAQDH 450
VLK TGA PIAG FTPG FTNQIQAAF E + L+V DP DH
Sbjct: 45 VLKRTTATGAIPIAGHFTPGNFTNQIQAAFSELQFLVVTDPRADH 89
Score = 45.2 bits (102), Expect = 8e-04
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +1
Query: 58 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQM 159
MSG LD+L + E+D+ +LAA THLG+ N++FQM
Sbjct: 1 MSGILDILPMKEDDILNLLAAGTHLGSPNLDFQM 34
>UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD
laminin binding protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 34/67 kD laminin
binding protein - Strongylocentrotus purpuratus
Length = 220
Score = 60.5 bits (140), Expect = 2e-08
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +1
Query: 58 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGT-HVINL 210
MSGGL+ LAL E+DV K LA+ H+G+ N++++M Y+YKR+ DG H I L
Sbjct: 1 MSGGLECLALKEDDVQKFLASGAHIGSSNMDYKMAPYIYKRKPDGNIHSIGL 52
>UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal
protein SA; n=1; Mus musculus|Rep: PREDICTED: similar to
Ribosomal protein SA - Mus musculus
Length = 181
Score = 59.7 bits (138), Expect = 3e-08
Identities = 39/102 (38%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +1
Query: 172 YKRRGDGTHVINLRRTWEKXXXXXXXXXXX-EDPADVFVISSRAFGQRAVLKFAAHTGAT 348
Y + DGT++ L RTWEK E+ +V +ISS TGA
Sbjct: 57 YLEKSDGTYIRYLNRTWEKLLLLEAQTTVANENSTNVRLISSLGTN---------FTGAI 107
Query: 349 PIAGRFTPGAFTNQIQAAFREPRLLIV*DPAQDHQPITEASY 474
P AG F P F N IQA F+ LL+V P + QP+TEAS+
Sbjct: 108 PTAGSFIPRPFINLIQATFQVTCLLVVTGPKMNQQPLTEASF 149
>UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila
melanogaster|Rep: GM15484p - Drosophila melanogaster
(Fruit fly)
Length = 92
Score = 57.2 bits (132), Expect = 2e-07
Identities = 31/73 (42%), Positives = 36/73 (49%)
Frame = -2
Query: 227 FSHVRRRLITCVPSPRRL*TYVSIWKLTFSAPKWXXXXXXXXXXXXXXXXXSNPPDIVAF 48
FS V RL PS RRL TY SIWKLTFS P+W S PPD++ +
Sbjct: 21 FSQVLPRLRMLTPSARRLYTYCSIWKLTFSEPRWVVATNILVMSSSLRDRISKPPDMLTW 80
Query: 47 VRVTTKRV*CHWE 9
+ T R C WE
Sbjct: 81 KELRTSR--CRWE 91
>UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:
NEQ508 - Nanoarchaeum equitans
Length = 201
Score = 57.2 bits (132), Expect = 2e-07
Identities = 31/117 (26%), Positives = 53/117 (45%)
Frame = +1
Query: 118 ATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSR 297
A H+G ++ M+ YV K R DG + ++R+ E+ E P ++ V+ R
Sbjct: 13 AGIHIGTRHLTKDMKPYVSKIREDGLAIFDIRKIDERLRLASKMLSYYE-PNEILVVGRR 71
Query: 298 AFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV*DPAQDHQPITEA 468
+ KF+ T GR+ PG TN + EP ++++ DP D + +A
Sbjct: 72 ETAITPIKKFSEITKVKAFPGRYPPGTLTNPQLKYYMEPEVILITDPIMDKNALHDA 128
>UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1;
Entodinium caudatum|Rep: Putative uncharacterized
protein - Entodinium caudatum
Length = 163
Score = 56.4 bits (130), Expect = 3e-07
Identities = 25/46 (54%), Positives = 32/46 (69%)
Frame = +1
Query: 352 IAGRFTPGAFTNQIQAAFREPRLLIV*DPAQDHQPITEASYVNIPV 489
+ GR++PG TNQ + EPRLLIV DP D+ I E+SYVN+PV
Sbjct: 3 VTGRWSPGMLTNQTTKKYVEPRLLIVSDPRTDYNAILESSYVNLPV 48
>UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella
natans|Rep: Ribosomal RNA S0 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 211
Score = 56.0 bits (129), Expect = 4e-07
Identities = 29/130 (22%), Positives = 63/130 (48%)
Frame = +1
Query: 100 VTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADV 279
++ ++ + ++GA V+F+M+ ++ K++ + + INL T++ +
Sbjct: 7 ISLLIYSQNYIGAAYVDFRMKNHIIKQKNNLNNKINLFTTYKNLIYLPSLLFSISSMRKL 66
Query: 280 FVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV*DPAQDHQPI 459
+I ++ ++A+ + I + PG F+N+ +F P IV +P D + I
Sbjct: 67 AIIDTKCISRKAIKQICIALNCRGIFKNYIPGNFSNRQIKSFMLPEAAIVAEPKNDPRII 126
Query: 460 TEASYVNIPV 489
E S +NIP+
Sbjct: 127 RELSNINIPI 136
>UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2;
Thermoprotei|Rep: Ribosomal protein S2 - Cenarchaeum
symbiosum
Length = 208
Score = 54.8 bits (126), Expect = 1e-06
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 2/136 (1%)
Frame = +1
Query: 88 SEEDVTKMLAATT--HLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXX 261
S+++ + L T+ +G + M+ ++ GT+ ++L T +
Sbjct: 7 SDDEYMRNLITTSGISIGTQVKTKFMKQFISDTDPTGTYTLDLEAT-QGRIKAAAQFIEH 65
Query: 262 EDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV*DPA 441
+++ V S + + + KFA G I RF PG TN + EP+LL+V DP
Sbjct: 66 TGASELIVCSGKDSARVPIRKFAELVGCKDIHKRFMPGTLTNPDLPKYMEPKLLLVCDPQ 125
Query: 442 QDHQPITEASYVNIPV 489
D Q +TEA+ IPV
Sbjct: 126 VDAQAVTEATNAGIPV 141
>UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0182600 protein -
Oryza sativa subsp. japonica (Rice)
Length = 223
Score = 52.8 bits (121), Expect = 4e-06
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = +1
Query: 379 FTNQIQAAFREPRLLIV*DPAQDHQPITEASYVNIP 486
FTNQ+Q +F EPRLLI+ DP DHQPI E++ NIP
Sbjct: 30 FTNQLQTSFSEPRLLILTDPRTDHQPIKESALGNIP 65
>UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep:
LOC204010 protein - Homo sapiens (Human)
Length = 197
Score = 41.5 bits (93), Expect = 0.010
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +1
Query: 316 VLKFAAHTGATPIAGRFTPGAF 381
+LKFAA TGATPIAG FTPG F
Sbjct: 1 MLKFAAATGATPIAGHFTPGTF 22
>UniRef50_UPI00005A3143 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1;
Canis lupus familiaris|Rep: PREDICTED: similar to 40S
ribosomal protein SA (p40) (34/67 kDa laminin receptor)
- Canis familiaris
Length = 160
Score = 36.7 bits (81), Expect = 0.28
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +1
Query: 337 TGATPIAGRFTPGAFTNQIQAAFREPRLLIV*DPAQDHQ 453
T A+PI+G F NQ QAA EPRLL+V P DHQ
Sbjct: 17 TAASPISG-----TFANQTQAARWEPRLLMVTHPRADHQ 50
>UniRef50_Q6C1V9 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 427
Score = 35.1 bits (77), Expect = 0.84
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Frame = +1
Query: 88 SEEDVTKMLAATTHLG--AENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXX 261
+E VT +LAA HLG E + + ++Y R DG +I+L +T +
Sbjct: 171 TEATVTSLLAAGAHLGHAVELGHVNNQPFIYGVR-DGISIIDLEQTVTQLRRAARITEAV 229
Query: 262 EDPADVFVISSRAFGQRAVLK-FAAHTGATPIAGRFTPGAFTN 387
+ + GQ+ L+ + GA+ + ++ PGA TN
Sbjct: 230 AKQNGLILFVGTRDGQKLALEAMSRRCGASYVHSKWIPGAITN 272
>UniRef50_Q9W2T1 Cluster: CG9817-PA; n=1; Drosophila melanogaster|Rep:
CG9817-PA - Drosophila melanogaster (Fruit fly)
Length = 2090
Score = 33.5 bits (73), Expect = 2.6
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -3
Query: 376 HQE*NVQQLVLRQCGQQI*AQHAGQMHVMR*QTHQLDPPRRQQHEQ 239
HQ+ + QQL +Q QQ QH Q H + Q QL +QQH Q
Sbjct: 968 HQQQHAQQLQHQQLQQQHAQQHQQQQHHLHQQHQQLHHDPQQQHPQ 1013
>UniRef50_UPI000023ED36 Cluster: hypothetical protein FG06308.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG06308.1 - Gibberella zeae PH-1
Length = 645
Score = 33.1 bits (72), Expect = 3.4
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Frame = +1
Query: 94 EDVTK--MLAATTHLGAENV--NFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXX 261
ED+T +LA+ TH+G + N Y+Y R G H+I+L T
Sbjct: 126 EDITLELLLASQTHIGHKTSLWNPANSRYIYGVR-QGVHMISLETTAAHLRRAARVVEEV 184
Query: 262 EDPADVFVISSRAFGQRAVLKFAAH-TGATPIAGRFTPGAFTNQ 390
A + + GQ ++ AA GA + ++TPG TN+
Sbjct: 185 AYNAGLILFVGNRKGQMEIVTQAAEMAGACHLFTKWTPGGITNR 228
>UniRef50_Q67Q95 Cluster: Putative uncharacterized protein; n=1;
Symbiobacterium thermophilum|Rep: Putative
uncharacterized protein - Symbiobacterium thermophilum
Length = 594
Score = 33.1 bits (72), Expect = 3.4
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +1
Query: 283 VISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFRE----PRLLIV*DPAQDH 450
V SR+ Q V++ A GA P+AG A ++++ A R+ PRL+I+ + DH
Sbjct: 182 VEQSRSALQFVVVQEAESQGAAPLAGVAVVQATPDEVEEARRQDLTVPRLIILEEVQADH 241
Query: 451 QPITEASYVNIP 486
+T + ++P
Sbjct: 242 PEVTADAIRDVP 253
>UniRef50_UPI0000E4908F Cluster: PREDICTED: similar to Ncoa6
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Ncoa6 protein - Strongylocentrotus
purpuratus
Length = 2349
Score = 32.3 bits (70), Expect = 6.0
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -3
Query: 346 LRQCGQQI*AQHAGQMHVMR*QT-HQLDPPRRQQHEQR 236
L+Q Q + QHA Q H ++ Q HQL + QQH+Q+
Sbjct: 498 LQQLQQHLQQQHAQQQHQLQQQVHHQLQQQQHQQHQQQ 535
>UniRef50_A7PZX1 Cluster: Chromosome chr15 scaffold_40, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr15 scaffold_40, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 130
Score = 32.3 bits (70), Expect = 6.0
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +1
Query: 298 AFGQRAVLKFAAHTGATPIAGRFTP 372
A GQ AVLK +TGA +AGR TP
Sbjct: 101 AAGQGAVLKLVRYTGAHAVAGRHTP 125
>UniRef50_Q9M8M2 Cluster: Putative uncharacterized protein
T21F11.13; n=1; Arabidopsis thaliana|Rep: Putative
uncharacterized protein T21F11.13 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 481
Score = 31.9 bits (69), Expect = 7.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 279 HISWILHGDNSTSSEYKLFPCTPKINYVRT 190
H + + G N T+S Y PC P +NY+RT
Sbjct: 79 HFNIYVDGWNVTNSHYIAPPCNPSLNYLRT 108
>UniRef50_Q8SZ38 Cluster: RE18076p; n=1; Drosophila
melanogaster|Rep: RE18076p - Drosophila melanogaster
(Fruit fly)
Length = 528
Score = 31.9 bits (69), Expect = 7.9
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -1
Query: 252 NSTSSEYKLFPCTPKINYVRTVTTAFINVRLHL 154
N S Y FP PK+ YV V T+ NV HL
Sbjct: 204 NQYPSIYNKFPSYPKVEYVSVVNTSDANVTQHL 236
>UniRef50_Q55F37 Cluster: Putative MADS-box transcription factor;
n=1; Dictyostelium discoideum AX4|Rep: Putative MADS-box
transcription factor - Dictyostelium discoideum AX4
Length = 1050
Score = 31.9 bits (69), Expect = 7.9
Identities = 23/76 (30%), Positives = 33/76 (43%)
Frame = -3
Query: 376 HQE*NVQQLVLRQCGQQI*AQHAGQMHVMR*QTHQLDPPRRQQHEQRVQAFPMYAED*LR 197
HQ+ QQ Q QQ QH Q H Q Q P+ QQH+Q Q P + +
Sbjct: 535 HQQHQHQQHPQMQQQQQQQQQH--QQHPQMQQIQQQQHPQMQQHQQHQQQHPQMQQQHMN 592
Query: 196 AYRHHGVYKRTSPSGN 149
++ + + +SP N
Sbjct: 593 NHQINHHHLNSSPEIN 608
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,172,107
Number of Sequences: 1657284
Number of extensions: 9087288
Number of successful extensions: 20954
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 20306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20885
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28019067077
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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