Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_N21
         (421 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    25   1.5  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    22   7.9  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    22   7.9  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    22   7.9  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +2

Query: 302 RSTRYTSWSRCETT*KP 352
           RSTR TSW R   T KP
Sbjct: 281 RSTRPTSWPRSRPTSKP 297


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 58   NYNQQSYGGGPTRNQAYGGNN 120
            +YN Q  GGG  R ++   NN
Sbjct: 1164 SYNGQMGGGGANRKRSSATNN 1184


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 40  HPNLLRLLYHCL 5
           HPNLL+LL  C+
Sbjct: 893 HPNLLKLLAVCM 904


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 269 RVYRASVGSTLRSTRYTSWSRCETT*KPSGY 361
           RV  A   S  R  RYT+ S+C    + SG+
Sbjct: 185 RVSNAYTLSDHRVIRYTAGSKCHRVAQGSGF 215


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 352,813
Number of Sequences: 2352
Number of extensions: 5736
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34632603
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)