Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_N21
(421 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59691-1|CAA42212.1| 386|Drosophila melanogaster P11 (hnRNP pro... 45 5e-05
X58183-1|CAA41170.1| 386|Drosophila melanogaster heterogeneous ... 45 5e-05
X54803-1|CAA38574.1| 386|Drosophila melanogaster Hrb87F protein. 45 5e-05
BT012315-1|AAS77440.1| 385|Drosophila melanogaster LD32727p pro... 45 5e-05
AE014297-1716|AAF54967.1| 385|Drosophila melanogaster CG12749-P... 45 5e-05
M25545-4|AAA28621.1| 361|Drosophila melanogaster protein ( D.me... 38 0.007
M25545-3|AAA28624.1| 365|Drosophila melanogaster protein ( D.me... 38 0.007
M25545-2|AAA28623.1| 360|Drosophila melanogaster protein ( D.me... 38 0.007
M25545-1|AAA28622.1| 364|Drosophila melanogaster protein ( D.me... 38 0.007
M15766-1|AAA70426.1| 365|Drosophila melanogaster unknown protei... 38 0.007
AY061448-1|AAL28996.1| 361|Drosophila melanogaster LD38464p pro... 38 0.007
AE014297-4248|AAN14144.1| 361|Drosophila melanogaster CG9983-PF... 38 0.007
AE014297-4247|AAN14143.1| 361|Drosophila melanogaster CG9983-PD... 38 0.007
AE014297-4246|AAN14142.1| 365|Drosophila melanogaster CG9983-PC... 38 0.007
AE014297-4245|AAF56801.1| 365|Drosophila melanogaster CG9983-PB... 38 0.007
AE014297-4244|AAN14141.1| 360|Drosophila melanogaster CG9983-PE... 38 0.007
AE014297-4243|AAF56800.2| 364|Drosophila melanogaster CG9983-PA... 38 0.007
L02106-2|AAA99872.1| 465|Drosophila melanogaster ribonucleoprot... 30 1.4
L02106-1|AAA99873.1| 471|Drosophila melanogaster ribonucleoprot... 30 1.4
BT010254-1|AAQ23572.1| 196|Drosophila melanogaster RE34656p pro... 30 1.4
BT001320-1|AAN71075.1| 434|Drosophila melanogaster AT15526p pro... 30 1.4
AE014297-4014|AAX53003.1| 434|Drosophila melanogaster CG6354-PE... 30 1.4
AE014297-4013|AAX53002.1| 434|Drosophila melanogaster CG6354-PD... 30 1.4
AE014297-4012|AAX53001.1| 471|Drosophila melanogaster CG6354-PI... 30 1.4
AE014297-4011|AAX53000.1| 471|Drosophila melanogaster CG6354-PH... 30 1.4
AE014297-4010|AAX52999.1| 471|Drosophila melanogaster CG6354-PF... 30 1.4
AE014297-4009|AAF56633.1| 471|Drosophila melanogaster CG6354-PB... 30 1.4
AE014297-4008|AAX52998.1| 465|Drosophila melanogaster CG6354-PG... 30 1.4
AE014297-4007|AAX52997.1| 465|Drosophila melanogaster CG6354-PC... 30 1.4
AE014297-4006|AAN14092.1| 465|Drosophila melanogaster CG6354-PA... 30 1.4
AY061629-1|AAL29177.1| 666|Drosophila melanogaster SD10722p pro... 28 5.8
AE014296-514|AAF47690.1| 666|Drosophila melanogaster CG2103-PB,... 28 5.8
AE014296-513|AAF47689.1| 666|Drosophila melanogaster CG2103-PA,... 28 5.8
AY268067-1|AAQ56703.1| 666|Drosophila melanogaster UDP-GalNAc:p... 27 7.7
>X59691-1|CAA42212.1| 386|Drosophila melanogaster P11 (hnRNP
protein) protein.
Length = 386
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = +1
Query: 52 FGNYNQQSYGGGPTRNQAYGGNNRAAPYN 138
FGN QQSYGGGP RN + GNNR APY+
Sbjct: 317 FGNEYQQSYGGGPQRNSNF-GNNRPAPYS 344
>X58183-1|CAA41170.1| 386|Drosophila melanogaster heterogeneous
nuclear ribonucleoproteinprotein.
Length = 386
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = +1
Query: 52 FGNYNQQSYGGGPTRNQAYGGNNRAAPYN 138
FGN QQSYGGGP RN + GNNR APY+
Sbjct: 317 FGNEYQQSYGGGPQRNSNF-GNNRPAPYS 344
>X54803-1|CAA38574.1| 386|Drosophila melanogaster Hrb87F protein.
Length = 386
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = +1
Query: 52 FGNYNQQSYGGGPTRNQAYGGNNRAAPYN 138
FGN QQSYGGGP RN + GNNR APY+
Sbjct: 317 FGNEYQQSYGGGPQRNSNF-GNNRPAPYS 344
>BT012315-1|AAS77440.1| 385|Drosophila melanogaster LD32727p
protein.
Length = 385
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = +1
Query: 52 FGNYNQQSYGGGPTRNQAYGGNNRAAPYN 138
FGN QQSYGGGP RN + GNNR APY+
Sbjct: 316 FGNEYQQSYGGGPQRNSNF-GNNRPAPYS 343
>AE014297-1716|AAF54967.1| 385|Drosophila melanogaster CG12749-PA,
isoform A protein.
Length = 385
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = +1
Query: 52 FGNYNQQSYGGGPTRNQAYGGNNRAAPYN 138
FGN QQSYGGGP RN + GNNR APY+
Sbjct: 316 FGNEYQQSYGGGPQRNSNF-GNNRPAPYS 343
>M25545-4|AAA28621.1| 361|Drosophila melanogaster protein (
D.melanogaster Hrb98DElocus encoding heterogeneous
nuclear ribonucleoproteinisoforms, exon 5. ).
Length = 361
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPY 135
DFG Y QQ+YGGGP R NNR PY
Sbjct: 302 DFGGY-QQNYGGGPQRGGGNFNNNRMQPY 329
>M25545-3|AAA28624.1| 365|Drosophila melanogaster protein (
D.melanogaster Hrb98DElocus encoding heterogeneous
nuclear ribonucleoproteinisoforms, exon 5. ).
Length = 365
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPY 135
DFG Y QQ+YGGGP R NNR PY
Sbjct: 306 DFGGY-QQNYGGGPQRGGGNFNNNRMQPY 333
>M25545-2|AAA28623.1| 360|Drosophila melanogaster protein (
D.melanogaster Hrb98DElocus encoding heterogeneous
nuclear ribonucleoproteinisoforms, exon 5. ).
Length = 360
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPY 135
DFG Y QQ+YGGGP R NNR PY
Sbjct: 301 DFGGY-QQNYGGGPQRGGGNFNNNRMQPY 328
>M25545-1|AAA28622.1| 364|Drosophila melanogaster protein (
D.melanogaster Hrb98DElocus encoding heterogeneous
nuclear ribonucleoproteinisoforms, exon 5. ).
Length = 364
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPY 135
DFG Y QQ+YGGGP R NNR PY
Sbjct: 305 DFGGY-QQNYGGGPQRGGGNFNNNRMQPY 332
>M15766-1|AAA70426.1| 365|Drosophila melanogaster unknown protein
protein.
Length = 365
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPY 135
DFG Y QQ+YGGGP R NNR PY
Sbjct: 306 DFGGY-QQNYGGGPQRGGGNFNNNRMQPY 333
>AY061448-1|AAL28996.1| 361|Drosophila melanogaster LD38464p
protein.
Length = 361
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPY 135
DFG Y QQ+YGGGP R NNR PY
Sbjct: 302 DFGGY-QQNYGGGPQRGGGNFNNNRMQPY 329
>AE014297-4248|AAN14144.1| 361|Drosophila melanogaster CG9983-PF,
isoform F protein.
Length = 361
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPY 135
DFG Y QQ+YGGGP R NNR PY
Sbjct: 302 DFGGY-QQNYGGGPQRGGGNFNNNRMQPY 329
>AE014297-4247|AAN14143.1| 361|Drosophila melanogaster CG9983-PD,
isoform D protein.
Length = 361
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPY 135
DFG Y QQ+YGGGP R NNR PY
Sbjct: 302 DFGGY-QQNYGGGPQRGGGNFNNNRMQPY 329
>AE014297-4246|AAN14142.1| 365|Drosophila melanogaster CG9983-PC,
isoform C protein.
Length = 365
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPY 135
DFG Y QQ+YGGGP R NNR PY
Sbjct: 306 DFGGY-QQNYGGGPQRGGGNFNNNRMQPY 333
>AE014297-4245|AAF56801.1| 365|Drosophila melanogaster CG9983-PB,
isoform B protein.
Length = 365
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPY 135
DFG Y QQ+YGGGP R NNR PY
Sbjct: 306 DFGGY-QQNYGGGPQRGGGNFNNNRMQPY 333
>AE014297-4244|AAN14141.1| 360|Drosophila melanogaster CG9983-PE,
isoform E protein.
Length = 360
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPY 135
DFG Y QQ+YGGGP R NNR PY
Sbjct: 301 DFGGY-QQNYGGGPQRGGGNFNNNRMQPY 328
>AE014297-4243|AAF56800.2| 364|Drosophila melanogaster CG9983-PA,
isoform A protein.
Length = 364
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPY 135
DFG Y QQ+YGGGP R NNR PY
Sbjct: 305 DFGGY-QQNYGGGPQRGGGNFNNNRMQPY 332
>L02106-2|AAA99872.1| 465|Drosophila melanogaster ribonucleoprotein
protein.
Length = 465
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPYN 138
+FG QQ+YGGGP+++ NR PY+
Sbjct: 386 NFGTGYQQNYGGGPSKHNNMNA-NRMNPYS 414
>L02106-1|AAA99873.1| 471|Drosophila melanogaster ribonucleoprotein
protein.
Length = 471
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPYN 138
+FG QQ+YGGGP+++ NR PY+
Sbjct: 386 NFGTGYQQNYGGGPSKHNNMNA-NRMNPYS 414
>BT010254-1|AAQ23572.1| 196|Drosophila melanogaster RE34656p
protein.
Length = 196
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPYN 138
+FG QQ+YGGGP+++ NR PY+
Sbjct: 148 NFGTGYQQNYGGGPSKHNNMNA-NRMNPYS 176
>BT001320-1|AAN71075.1| 434|Drosophila melanogaster AT15526p
protein.
Length = 434
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPYN 138
+FG QQ+YGGGP+++ NR PY+
Sbjct: 386 NFGTGYQQNYGGGPSKHNNMNA-NRMNPYS 414
>AE014297-4014|AAX53003.1| 434|Drosophila melanogaster CG6354-PE,
isoform E protein.
Length = 434
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPYN 138
+FG QQ+YGGGP+++ NR PY+
Sbjct: 386 NFGTGYQQNYGGGPSKHNNMNA-NRMNPYS 414
>AE014297-4013|AAX53002.1| 434|Drosophila melanogaster CG6354-PD,
isoform D protein.
Length = 434
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPYN 138
+FG QQ+YGGGP+++ NR PY+
Sbjct: 386 NFGTGYQQNYGGGPSKHNNMNA-NRMNPYS 414
>AE014297-4012|AAX53001.1| 471|Drosophila melanogaster CG6354-PI,
isoform I protein.
Length = 471
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPYN 138
+FG QQ+YGGGP+++ NR PY+
Sbjct: 386 NFGTGYQQNYGGGPSKHNNMNA-NRMNPYS 414
>AE014297-4011|AAX53000.1| 471|Drosophila melanogaster CG6354-PH,
isoform H protein.
Length = 471
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPYN 138
+FG QQ+YGGGP+++ NR PY+
Sbjct: 386 NFGTGYQQNYGGGPSKHNNMNA-NRMNPYS 414
>AE014297-4010|AAX52999.1| 471|Drosophila melanogaster CG6354-PF,
isoform F protein.
Length = 471
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPYN 138
+FG QQ+YGGGP+++ NR PY+
Sbjct: 386 NFGTGYQQNYGGGPSKHNNMNA-NRMNPYS 414
>AE014297-4009|AAF56633.1| 471|Drosophila melanogaster CG6354-PB,
isoform B protein.
Length = 471
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPYN 138
+FG QQ+YGGGP+++ NR PY+
Sbjct: 386 NFGTGYQQNYGGGPSKHNNMNA-NRMNPYS 414
>AE014297-4008|AAX52998.1| 465|Drosophila melanogaster CG6354-PG,
isoform G protein.
Length = 465
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPYN 138
+FG QQ+YGGGP+++ NR PY+
Sbjct: 386 NFGTGYQQNYGGGPSKHNNMNA-NRMNPYS 414
>AE014297-4007|AAX52997.1| 465|Drosophila melanogaster CG6354-PC,
isoform C protein.
Length = 465
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPYN 138
+FG QQ+YGGGP+++ NR PY+
Sbjct: 386 NFGTGYQQNYGGGPSKHNNMNA-NRMNPYS 414
>AE014297-4006|AAN14092.1| 465|Drosophila melanogaster CG6354-PA,
isoform A protein.
Length = 465
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 49 DFGNYNQQSYGGGPTRNQAYGGNNRAAPYN 138
+FG QQ+YGGGP+++ NR PY+
Sbjct: 386 NFGTGYQQNYGGGPSKHNNMNA-NRMNPYS 414
>AY061629-1|AAL29177.1| 666|Drosophila melanogaster SD10722p
protein.
Length = 666
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 309 LDTPHGLDARPHRSPQDTDRHVAGAEAHTHLDYYE 413
+D PH D P + PQ+ + A A+A D+++
Sbjct: 96 VDNPHPADDEPRQQPQEELQMAAPADASVKKDWHD 130
>AE014296-514|AAF47690.1| 666|Drosophila melanogaster CG2103-PB,
isoform B protein.
Length = 666
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 309 LDTPHGLDARPHRSPQDTDRHVAGAEAHTHLDYYE 413
+D PH D P + PQ+ + A A+A D+++
Sbjct: 96 VDNPHPADDEPQQQPQEELQMAAPADASVKKDWHD 130
>AE014296-513|AAF47689.1| 666|Drosophila melanogaster CG2103-PA,
isoform A protein.
Length = 666
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 309 LDTPHGLDARPHRSPQDTDRHVAGAEAHTHLDYYE 413
+D PH D P + PQ+ + A A+A D+++
Sbjct: 96 VDNPHPADDEPQQQPQEELQMAAPADASVKKDWHD 130
>AY268067-1|AAQ56703.1| 666|Drosophila melanogaster
UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase
protein.
Length = 666
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 312 DTPHGLDARPHRSPQDTDRHVAGAEAHTHLDYYE 413
D PH D P + PQ+ + A A+A D+++
Sbjct: 97 DNPHPADDEPRQQPQEELQMAAPADASVKKDWHD 130
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,276,928
Number of Sequences: 53049
Number of extensions: 257754
Number of successful extensions: 834
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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