Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_N20
         (496 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.0  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   2.6  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   2.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   3.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   6.1  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   8.1  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = +3

Query: 306 GWIKKKVILTYQKDVCQLKTLINVQRGMQKLRQ*TPSSVTSL 431
           GW+KK  + +++ +       + +   +QKL++  PS  T L
Sbjct: 124 GWLKKGKLSSFESNDETKDGKVGLYERIQKLKKANPSLKTLL 165


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 389 HTSLYIYQCLQLTHVFLISQYNLF 318
           H S Y Y    +T   L+S Y+LF
Sbjct: 51  HKSDYFYFSFYITSYTLLSVYSLF 74


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 389 HTSLYIYQCLQLTHVFLISQYNLF 318
           H S Y Y    +T   L+S Y+LF
Sbjct: 51  HKSDYFYFSFYITSYTLLSVYSLF 74


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -1

Query: 331 NITFFFIHPNHHNWLGFAN 275
           N+ + F H   H WL + N
Sbjct: 393 NLDWTFCHMVSHKWLNYIN 411


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 16/56 (28%), Positives = 23/56 (41%)
 Frame = +2

Query: 329 IDLSKRRVSAEDIDKCTERYAKAKAVNSILRHVAELLHYESSEQLEELYKTTAWHF 496
           I+L K   S  D+ K     A      ++L H   +L+Y  S + E    T   HF
Sbjct: 128 INLLKHYQSTTDLHKKIRYSAFGMIFVALLEHCFSMLNYVYSSKCEN-NSTGVEHF 182


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 403 SKLHPPSRR*TTSL*ELRAIGRV 471
           SKL PP  R T S  E+ A   V
Sbjct: 48  SKLVPPDERITYSWTEINAFANV 70


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 403 SKLHPPSRR*TTSL*ELRAIGRV 471
           SKL PP  R T S  E+ A   V
Sbjct: 48  SKLVPPDERITYSWTEINAFANV 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,685
Number of Sequences: 336
Number of extensions: 2155
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)