Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_N17
         (568 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       27   0.085
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    27   0.085
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   7.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.3  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   9.7  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   9.7  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   9.7  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 27.5 bits (58), Expect = 0.085
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = +1

Query: 412 HIQTHANGSNVLISSCDLKL*LSYLINQHLRHISMIYNY 528
           H++ HA       + CD       ++N H++  S +Y Y
Sbjct: 249 HLRNHAGSKPFQCNKCDYTCVNKSMLNSHMKSHSNVYRY 287


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 27.5 bits (58), Expect = 0.085
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = +1

Query: 412 HIQTHANGSNVLISSCDLKL*LSYLINQHLRHISMIYNY 528
           H++ HA       + CD       ++N H++  S +Y Y
Sbjct: 7   HLRNHAGSKPFQCNKCDYTCVNKSMLNSHMKSHSNVYRY 45


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/36 (22%), Positives = 19/36 (52%)
 Frame = +1

Query: 445 LISSCDLKL*LSYLINQHLRHISMIYNYVGHQHLSI 552
           +++  D  L  S  +N+HL H+  ++  +    ++I
Sbjct: 454 VVNYIDDLLVASETLNEHLEHLRQVFEKLKQARMTI 489


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +3

Query: 336 TYYGERVYKLVPPDTLVEPIFHEYYAHTDPREWFKRAY 449
           TY GER   +V  D   +  +  +    D  E F RAY
Sbjct: 323 TYAGERFDFIVTADQPQDVYWMHFRGLMDCDERFTRAY 360


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = +1

Query: 220 WLYIRCCWQKEI 255
           +L + CCW K +
Sbjct: 8   YLIVACCWGKSL 19


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/31 (25%), Positives = 14/31 (45%)
 Frame = +1

Query: 412 HIQTHANGSNVLISSCDLKL*LSYLINQHLR 504
           H++TH+         CD +   S  +  H+R
Sbjct: 40  HVRTHSGEKPFRCPVCDRRFSQSSSVTTHMR 70


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/31 (25%), Positives = 14/31 (45%)
 Frame = +1

Query: 412 HIQTHANGSNVLISSCDLKL*LSYLINQHLR 504
           H++TH+         CD +   S  +  H+R
Sbjct: 296 HVRTHSGEKPFRCPVCDRRFSQSSSVTTHMR 326


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,469
Number of Sequences: 336
Number of extensions: 2933
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)