Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_N17
(568 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009189-1|AAH09189.1| 144|Homo sapiens NDUFA13 protein protein. 58 3e-08
BC000589-1|AAH00589.2| 146|Homo sapiens NDUFA13 protein protein. 58 3e-08
AF286697-1|AAG28167.1| 144|Homo sapiens novel cell death-regula... 58 3e-08
AF261134-1|AAG44670.1| 227|Homo sapiens CDA016 protein. 58 3e-08
AF155662-1|AAF67481.1| 144|Homo sapiens putative 16.7 kDa prote... 58 3e-08
AF132973-1|AAD27748.1| 135|Homo sapiens CGI-39 protein protein. 58 3e-08
AM177180-1|CAJ45484.1| 1670|Homo sapiens kinesin-like protein KI... 31 3.7
AB007918-1|BAA32294.2| 1628|Homo sapiens KIAA0449 protein protein. 31 3.7
S83364-1|AAB50849.1| 122|Homo sapiens putative Rab5-interacting... 30 6.5
BC001871-1|AAH01871.1| 137|Homo sapiens C20orf24 protein protein. 30 6.5
AL050318-10|CAB75367.1| 129|Homo sapiens chromosome 20 open rea... 30 6.5
AL050318-9|CAI23511.1| 137|Homo sapiens chromosome 20 open read... 30 6.5
AF112213-1|AAF17201.1| 129|Homo sapiens putative Rab5-interacti... 30 6.5
BX537855-1|CAD97863.1| 974|Homo sapiens hypothetical protein pr... 29 8.6
AY368076-1|AAR04774.1| 1674|Homo sapiens kinesin family member 2... 29 8.6
AL592301-6|CAI13935.1| 1469|Homo sapiens small nuclear RNA activ... 29 8.6
AF032387-1|AAC02972.1| 1469|Homo sapiens SNAP190 protein. 29 8.6
AB051495-1|BAB21799.2| 1657|Homo sapiens KIAA1708 protein. 29 8.6
>BC009189-1|AAH09189.1| 144|Homo sapiens NDUFA13 protein protein.
Length = 144
Score = 57.6 bits (133), Expect = 3e-08
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +3
Query: 93 RQYFSGYAMFAGYIGVTVGALYLYNINYKQIIKEQIEMRSAKMAVYPMLLAERDREYLKQ 272
R+ SGY+M A IG + + ++ + QIE A++A+ P+L AE DR L+
Sbjct: 27 RRGLSGYSMLAIGIGTLIYGHWSIMKWNRERRRLQIEDFEARIALLPLLQAETDRRTLQM 86
Query: 273 LRRNRDAEAELMRDVPGWEVG 335
LR N + EA +M+DVP W+VG
Sbjct: 87 LRENLEEEAIIMKDVPDWKVG 107
>BC000589-1|AAH00589.2| 146|Homo sapiens NDUFA13 protein protein.
Length = 146
Score = 57.6 bits (133), Expect = 3e-08
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +3
Query: 93 RQYFSGYAMFAGYIGVTVGALYLYNINYKQIIKEQIEMRSAKMAVYPMLLAERDREYLKQ 272
R+ SGY+M A IG + + ++ + QIE A++A+ P+L AE DR L+
Sbjct: 29 RRGLSGYSMLAIGIGTLIYGHWSIMKWNRERRRLQIEDFEARIALLPLLQAETDRRTLQM 88
Query: 273 LRRNRDAEAELMRDVPGWEVG 335
LR N + EA +M+DVP W+VG
Sbjct: 89 LRENLEEEAIIMKDVPDWKVG 109
>AF286697-1|AAG28167.1| 144|Homo sapiens novel cell
death-regulatory protein GRIM19 protein.
Length = 144
Score = 57.6 bits (133), Expect = 3e-08
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +3
Query: 93 RQYFSGYAMFAGYIGVTVGALYLYNINYKQIIKEQIEMRSAKMAVYPMLLAERDREYLKQ 272
R+ SGY+M A IG + + ++ + QIE A++A+ P+L AE DR L+
Sbjct: 27 RRGLSGYSMLAIGIGTLIYGHWSIMKWNRERRRLQIEDFEARIALLPLLQAETDRRTLQM 86
Query: 273 LRRNRDAEAELMRDVPGWEVG 335
LR N + EA +M+DVP W+VG
Sbjct: 87 LRENLEEEAIIMKDVPDWKVG 107
>AF261134-1|AAG44670.1| 227|Homo sapiens CDA016 protein.
Length = 227
Score = 57.6 bits (133), Expect = 3e-08
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +3
Query: 93 RQYFSGYAMFAGYIGVTVGALYLYNINYKQIIKEQIEMRSAKMAVYPMLLAERDREYLKQ 272
R+ SGY+M A IG + + ++ + QIE A++A+ P+L AE DR L+
Sbjct: 110 RRGLSGYSMLAIGIGTLIYGHWSIMKWNRERRRLQIEDFEARIALLPLLQAETDRRTLQM 169
Query: 273 LRRNRDAEAELMRDVPGWEVG 335
LR N + EA +M+DVP W+VG
Sbjct: 170 LRENLEEEAIIMKDVPDWKVG 190
>AF155662-1|AAF67481.1| 144|Homo sapiens putative 16.7 kDa protein
protein.
Length = 144
Score = 57.6 bits (133), Expect = 3e-08
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +3
Query: 93 RQYFSGYAMFAGYIGVTVGALYLYNINYKQIIKEQIEMRSAKMAVYPMLLAERDREYLKQ 272
R+ SGY+M A IG + + ++ + QIE A++A+ P+L AE DR L+
Sbjct: 27 RRGLSGYSMLAIGIGTLIYGHWSIMKWNRERRRLQIEDFEARIALLPLLQAETDRRTLQM 86
Query: 273 LRRNRDAEAELMRDVPGWEVG 335
LR N + EA +M+DVP W+VG
Sbjct: 87 LRENLEEEAIIMKDVPDWKVG 107
>AF132973-1|AAD27748.1| 135|Homo sapiens CGI-39 protein protein.
Length = 135
Score = 57.6 bits (133), Expect = 3e-08
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +3
Query: 93 RQYFSGYAMFAGYIGVTVGALYLYNINYKQIIKEQIEMRSAKMAVYPMLLAERDREYLKQ 272
R+ SGY+M A IG + + ++ + QIE A++A+ P+L AE DR L+
Sbjct: 18 RRGLSGYSMLAIGIGTLIYGHWSIMKWNRERRRLQIEDFEARIALLPLLQAETDRRTLQM 77
Query: 273 LRRNRDAEAELMRDVPGWEVG 335
LR N + EA +M+DVP W+VG
Sbjct: 78 LRENLEEEAIIMKDVPDWKVG 98
>AM177180-1|CAJ45484.1| 1670|Homo sapiens kinesin-like protein
KIF21B variant protein.
Length = 1670
Score = 30.7 bits (66), Expect = 3.7
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +3
Query: 162 YNINYKQIIKEQIEMRSAKMAVYPMLLAERDREYLKQLRRNRDAEAELMRD 314
Y K++ E EM+ AK+A+ + E+ R L + +RNR+ A+L ++
Sbjct: 741 YERELKKLQAEVAEMKKAKVALMKQMREEQQRRRLVETKRNREI-AQLKKE 790
>AB007918-1|BAA32294.2| 1628|Homo sapiens KIAA0449 protein protein.
Length = 1628
Score = 30.7 bits (66), Expect = 3.7
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +3
Query: 162 YNINYKQIIKEQIEMRSAKMAVYPMLLAERDREYLKQLRRNRDAEAELMRD 314
Y K++ E EM+ AK+A+ + E+ R L + +RNR+ A+L ++
Sbjct: 745 YERELKKLQAEVAEMKKAKVALMKQMREEQQRRRLVETKRNREI-AQLKKE 794
>S83364-1|AAB50849.1| 122|Homo sapiens putative Rab5-interacting
protein protein.
Length = 122
Score = 29.9 bits (64), Expect = 6.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 108 GYAMFAGYIGVTVGALYLYNINYKQIIKEQ 197
G+ AG+ + G LYLY NY QI +E+
Sbjct: 53 GFLGIAGFCLINAGVLYLYFSNYLQIDEEE 82
>BC001871-1|AAH01871.1| 137|Homo sapiens C20orf24 protein protein.
Length = 137
Score = 29.9 bits (64), Expect = 6.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 108 GYAMFAGYIGVTVGALYLYNINYKQIIKEQ 197
G+ AG+ + G LYLY NY QI +E+
Sbjct: 67 GFLGIAGFCLINAGVLYLYFSNYLQIDEEE 96
>AL050318-10|CAB75367.1| 129|Homo sapiens chromosome 20 open
reading frame 24 protein.
Length = 129
Score = 29.9 bits (64), Expect = 6.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 108 GYAMFAGYIGVTVGALYLYNINYKQIIKEQ 197
G+ AG+ + G LYLY NY QI +E+
Sbjct: 67 GFLGIAGFCLINAGVLYLYFSNYLQIDEEE 96
>AL050318-9|CAI23511.1| 137|Homo sapiens chromosome 20 open reading
frame 24 protein.
Length = 137
Score = 29.9 bits (64), Expect = 6.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 108 GYAMFAGYIGVTVGALYLYNINYKQIIKEQ 197
G+ AG+ + G LYLY NY QI +E+
Sbjct: 67 GFLGIAGFCLINAGVLYLYFSNYLQIDEEE 96
>AF112213-1|AAF17201.1| 129|Homo sapiens putative Rab5-interacting
protein protein.
Length = 129
Score = 29.9 bits (64), Expect = 6.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 108 GYAMFAGYIGVTVGALYLYNINYKQIIKEQ 197
G+ AG+ + G LYLY NY QI +E+
Sbjct: 67 GFLGIAGFCLINAGVLYLYFSNYLQIDEEE 96
>BX537855-1|CAD97863.1| 974|Homo sapiens hypothetical protein
protein.
Length = 974
Score = 29.5 bits (63), Expect = 8.6
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +3
Query: 162 YNINYKQIIKEQIEMRSAKMAVYPMLLAERDREYLKQLRRNRDAEAELMRD 314
Y K++ ++ +EM+ K+ + + E+++ L + RRNR+ A+L +D
Sbjct: 99 YEKQLKKLQQDVMEMKKTKVRLMKQMKEEQEKARLTESRRNREI-AQLKKD 148
>AY368076-1|AAR04774.1| 1674|Homo sapiens kinesin family member 21A
protein.
Length = 1674
Score = 29.5 bits (63), Expect = 8.6
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +3
Query: 162 YNINYKQIIKEQIEMRSAKMAVYPMLLAERDREYLKQLRRNRDAEAELMRD 314
Y K++ ++ +EM+ K+ + + E+++ L + RRNR+ A+L +D
Sbjct: 752 YEKQLKKLQQDVMEMKKTKVRLMKQMKEEQEKARLTESRRNREI-AQLKKD 801
>AL592301-6|CAI13935.1| 1469|Homo sapiens small nuclear RNA
activating complex, polypeptidene phosphatase receptor
type V protein.
Length = 1469
Score = 29.5 bits (63), Expect = 8.6
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +3
Query: 225 VYPMLLAERDREYLKQLRRNRDAEAELMRDVPGWEVGTYYGERVYKLVPPDTLVEPIFHE 404
VY ++ E+ E L +NR+ + ELMRD+ G GT + K +PP T +
Sbjct: 92 VYQEVIQEKLAEANLLLAQNREQQEELMRDLAG-SKGTKVKDG--KSLPPSTYMGHFMKP 148
Query: 405 YY 410
Y+
Sbjct: 149 YF 150
>AF032387-1|AAC02972.1| 1469|Homo sapiens SNAP190 protein.
Length = 1469
Score = 29.5 bits (63), Expect = 8.6
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +3
Query: 225 VYPMLLAERDREYLKQLRRNRDAEAELMRDVPGWEVGTYYGERVYKLVPPDTLVEPIFHE 404
VY ++ E+ E L +NR+ + ELMRD+ G GT + K +PP T +
Sbjct: 92 VYQEVIQEKLAEANLLLAQNREQQEELMRDLAG-SKGTKVKDG--KSLPPSTYMGHFMKP 148
Query: 405 YY 410
Y+
Sbjct: 149 YF 150
>AB051495-1|BAB21799.2| 1657|Homo sapiens KIAA1708 protein.
Length = 1657
Score = 29.5 bits (63), Expect = 8.6
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +3
Query: 162 YNINYKQIIKEQIEMRSAKMAVYPMLLAERDREYLKQLRRNRDAEAELMRD 314
Y K++ ++ +EM+ K+ + + E+++ L + RRNR+ A+L +D
Sbjct: 735 YEKQLKKLQQDVMEMKKTKVRLMKQMKEEQEKARLTESRRNREI-AQLKKD 784
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,872,959
Number of Sequences: 237096
Number of extensions: 1740550
Number of successful extensions: 3514
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3514
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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