Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_N15
         (464 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   1.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   2.4  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   2.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   5.6  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   7.4  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    20   9.8  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    20   9.8  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    20   9.8  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +1

Query: 319 RANLASWPNEPPRPSGDATANTTAAPKPIAGNENLIQNPIRTPTPN 456
           +A+ A+ P     P+G  T +T+A+P  +   +   Q     PT N
Sbjct: 208 KASPAAAPRSVATPTGIPTPSTSASPPTVNIKKESPQMQSYRPTGN 253


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 104 SCSKLFKYHLSSRRRVASG 48
           +C KLF+   SS  R ASG
Sbjct: 893 TCEKLFRMKKSSALRPASG 911


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 356 LGGSFGQLARFARRPPRTLLQVTNRTIA 273
           +GG+ G+L R +    R+ L    RTIA
Sbjct: 168 IGGTTGKLRRRSTAASRSRLAAFKRTIA 195


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = -2

Query: 220 KTAVHLSKLKTDRNPNLIIETAILSFTIFYW 128
           +T     +LKTD+N  ++I   ++ F +  +
Sbjct: 28  QTVGKCQRLKTDKNCTIVIIFHLILFAVLLY 58


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 279 GAVCYLKERP 308
           GAVC+L+ RP
Sbjct: 135 GAVCHLETRP 144


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 261 CGLTLLDLEHW*HRKRL 211
           CG+T+  + +W   KR+
Sbjct: 270 CGITVSQVSNWFGNKRI 286


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 330 EIRASPAADAPSGNKPHH 277
           E  A+ ++ +PSG+ P H
Sbjct: 30  EAPAAYSSSSPSGSSPQH 47


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 330 EIRASPAADAPSGNKPHH 277
           E  A+ ++ +PSG+ P H
Sbjct: 30  EAPAAYSSSSPSGSSPQH 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,887
Number of Sequences: 336
Number of extensions: 2051
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)