Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_N13
(354 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona... 25 0.63
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 23 4.4
EF519370-1|ABP68479.1| 452|Anopheles gambiae LRIM1 protein. 22 5.9
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 22 5.9
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 22 5.9
AY341205-1|AAR13769.1| 285|Anopheles gambiae period protein. 22 5.9
AY341204-1|AAR13768.1| 285|Anopheles gambiae period protein. 22 5.9
AY341203-1|AAR13767.1| 285|Anopheles gambiae period protein. 22 5.9
AY341202-1|AAR13766.1| 285|Anopheles gambiae period protein. 22 5.9
AY028786-1|AAK32960.1| 501|Anopheles gambiae cytochrome P450 pr... 22 5.9
AJ302654-1|CAC35519.1| 168|Anopheles gambiae gSG2-like protein ... 22 7.8
>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
anion exchanger protein.
Length = 1102
Score = 25.4 bits (53), Expect = 0.63
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 335 RACRRGRSTRCSAYCPPPEYSGDMF 261
R C+ + T A C PEY D+F
Sbjct: 701 RTCKTLKGTLTGADCDKPEYVSDVF 725
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 22.6 bits (46), Expect = 4.4
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 204 TWPFYQLQRIPSNYGIGQIKHVSGVFRW 287
TW Y+L+ P YG ++ HV W
Sbjct: 79 TWYDYKLKWEPKEYGGVEMLHVPSDHIW 106
>EF519370-1|ABP68479.1| 452|Anopheles gambiae LRIM1 protein.
Length = 452
Score = 22.2 bits (45), Expect = 5.9
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +2
Query: 53 GELRIGVTLANNTIGLHSLRINDESEVKCLKQITQPGHQKDPRCVAISSDNLAILSASAD 232
G+ + + LANN I + LR DE C ++ D + I + NLA L+AS+D
Sbjct: 126 GQGKKNIYLANNKITM--LRDLDEG---CRSRV----QYLDLKLNEIDTVNLAELAASSD 176
Query: 233 SIKLWN 250
S++ N
Sbjct: 177 SLEHLN 182
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 22.2 bits (45), Expect = 5.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 204 TWPFYQLQRIPSNYGIGQIKHVSGVFRW 287
+W Y+L+ P YG Q+ HV W
Sbjct: 83 SWYDYKLRWEPKEYGGVQMLHVPSDHIW 110
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 22.2 bits (45), Expect = 5.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 204 TWPFYQLQRIPSNYGIGQIKHVSGVFRW 287
+W Y+L+ P YG Q+ HV W
Sbjct: 83 SWYDYKLRWEPKEYGGVQMLHVPSDHIW 110
>AY341205-1|AAR13769.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 22.2 bits (45), Expect = 5.9
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = -3
Query: 181 PWILLMSGLCYLLQTFHFTFIVDP*TMQADSVI 83
P+ L++ CY++ + +T V+P + + + VI
Sbjct: 5 PYRFLVNNGCYIVLSTEWTSFVNPWSRELEFVI 37
>AY341204-1|AAR13768.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 22.2 bits (45), Expect = 5.9
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = -3
Query: 181 PWILLMSGLCYLLQTFHFTFIVDP*TMQADSVI 83
P+ L++ CY++ + +T V+P + + + VI
Sbjct: 5 PYRFLVNNGCYIVLSTEWTSFVNPWSRELEFVI 37
>AY341203-1|AAR13767.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 22.2 bits (45), Expect = 5.9
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = -3
Query: 181 PWILLMSGLCYLLQTFHFTFIVDP*TMQADSVI 83
P+ L++ CY++ + +T V+P + + + VI
Sbjct: 5 PYRFLVNNGCYIVLSTEWTSFVNPWSRELEFVI 37
>AY341202-1|AAR13766.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 22.2 bits (45), Expect = 5.9
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = -3
Query: 181 PWILLMSGLCYLLQTFHFTFIVDP*TMQADSVI 83
P+ L++ CY++ + +T V+P + + + VI
Sbjct: 5 PYRFLVNNGCYIVLSTEWTSFVNPWSRELEFVI 37
>AY028786-1|AAK32960.1| 501|Anopheles gambiae cytochrome P450
protein.
Length = 501
Score = 22.2 bits (45), Expect = 5.9
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -3
Query: 160 GLCYLLQTFHFTFIVDP*TMQADSVIS*SDTNT*LSGG 47
GL YLL+ F FT D M I+ S T + GG
Sbjct: 458 GLVYLLKHFRFTLAKD--RMSVPLKITPSSTILTIDGG 493
>AJ302654-1|CAC35519.1| 168|Anopheles gambiae gSG2-like protein
protein.
Length = 168
Score = 21.8 bits (44), Expect = 7.8
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +2
Query: 83 NNTIGLHSLRINDESEVKCLKQITQPGHQK 172
NN+ G+ N +S V QPG Q+
Sbjct: 41 NNSAGVPDFGFNSQSNVPGFGNGQQPGQQQ 70
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,348
Number of Sequences: 2352
Number of extensions: 7464
Number of successful extensions: 63
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25794900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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