Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_N12
         (402 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               26   0.18 
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    26   0.18 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    26   0.18 
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   3.0  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    21   4.0  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    21   4.0  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    21   4.0  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   6.9  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   6.9  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    20   9.2  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 25.8 bits (54), Expect = 0.18
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 317 LVNLISHNRRRRNLTPNPALLGVWA 243
           L N  + NR RR L+    +LG+WA
Sbjct: 16  LENEFNINRPRRKLSKKQQMLGIWA 40


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 25.8 bits (54), Expect = 0.18
 Identities = 9/37 (24%), Positives = 16/37 (43%)
 Frame = -1

Query: 252 CVGCIFALLISKASWYAFCESSTTECLVSPVATSARY 142
           C  CI   + S   W  +C S+   C+ +  +   R+
Sbjct: 35  CRNCIHPTVFSVLFWLGYCNSAINPCIYALFSKDFRF 71


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 25.8 bits (54), Expect = 0.18
 Identities = 9/37 (24%), Positives = 16/37 (43%)
 Frame = -1

Query: 252 CVGCIFALLISKASWYAFCESSTTECLVSPVATSARY 142
           C  CI   + S   W  +C S+   C+ +  +   R+
Sbjct: 483 CRNCIHPTVFSVLFWLGYCNSAINPCIYALFSKDFRF 519


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -2

Query: 200 SVNPLQQNVWFLLWPLLRDTCS 135
           +V+PLQ    FL  P L D CS
Sbjct: 10  NVSPLQCTSPFLGGPQLTDVCS 31


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +3

Query: 69  KHLIPKASNPESKVFTSK*REITTGISQKWPQEKPDI 179
           K ++P A   + K  T K RE+   + +   + KP++
Sbjct: 65  KRVLPDALATDCKKCTDKQREVIKKVIKFLVENKPEL 101


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +3

Query: 69  KHLIPKASNPESKVFTSK*REITTGISQKWPQEKPDI 179
           K ++P A   + K  T K RE+   + +   + KP++
Sbjct: 65  KRVLPDALATDCKKCTDKQREVIKKVIKFLVENKPEL 101


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +3

Query: 69  KHLIPKASNPESKVFTSK*REITTGISQKWPQEKPDI 179
           K ++P A   + K  T K RE+   + +   + KP++
Sbjct: 65  KRVLPDALATDCKKCTDKQREVIKKVIKFLVENKPEL 101


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 5/8 (62%), Positives = 8/8 (100%)
 Frame = +1

Query: 172 QTFCCRGF 195
           +TFCC+G+
Sbjct: 455 KTFCCKGY 462


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 401 SPCTSPRSVCRVPRSHHR 348
           S  ++P SVC  PRS  +
Sbjct: 596 SASSAPTSVCSSPRSEDK 613


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
          beta-synthase protein.
          Length = 504

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 30 RAEFLQPGGS 1
          + EFL PGGS
Sbjct: 67 KCEFLNPGGS 76


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,208
Number of Sequences: 438
Number of extensions: 2413
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10008927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)