Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_N11
(445 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15940-1|CAA34066.1| 125|Homo sapiens protein ( Human mRNA for ... 181 9e-46
BC070373-1|AAH70373.1| 125|Homo sapiens ribosomal protein L31 p... 181 9e-46
BC017343-1|AAH17343.1| 125|Homo sapiens ribosomal protein L31 p... 181 9e-46
AC016738-2|AAY14823.1| 125|Homo sapiens unknown protein. 181 9e-46
AB061830-1|BAB79468.1| 125|Homo sapiens ribosomal protein L31 p... 181 9e-46
X69181-1|CAA48925.1| 121|Homo sapiens ribosomal protein L31 pro... 180 3e-45
BC070210-1|AAH70210.1| 121|Homo sapiens RPL31 protein protein. 170 2e-42
AB007180-1|BAA25839.1| 47|Homo sapiens ribosomal protein L31 p... 55 1e-07
BC035575-1|AAH35575.1| 1283|Homo sapiens peroxisome biogenesis f... 31 2.4
AF030356-1|AAB99758.1| 1283|Homo sapiens peroxisome biogenesis g... 31 2.4
AF026086-1|AAB87880.1| 1283|Homo sapiens peroxisome biogenesis d... 31 2.4
AC000064-1|AAB46346.1| 541|Homo sapiens WUGSC:H_RG083M05.1 prot... 31 2.4
AB052092-1|BAB59063.1| 1283|Homo sapiens Pex1pG843D protein. 31 2.4
AB052091-1|BAB59062.1| 1283|Homo sapiens Pex1pL664P protein. 31 2.4
AB052090-1|BAB59061.1| 1226|Homo sapiens Pex1p-634del690 protein. 31 2.4
AB008112-1|BAA85162.1| 1283|Homo sapiens PEX1 protein. 31 2.4
>X15940-1|CAA34066.1| 125|Homo sapiens protein ( Human mRNA for
ribosomal protein L31. ).
Length = 125
Score = 181 bits (441), Expect = 9e-46
Identities = 83/120 (69%), Positives = 100/120 (83%), Gaps = 1/120 (0%)
Frame = +1
Query: 40 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVR 216
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIR+FA K+MGTPDVR
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 217 VDTRLNKYLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 396
+DTRLNK +W+KG+RNVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 64 IDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>BC070373-1|AAH70373.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 181 bits (441), Expect = 9e-46
Identities = 83/120 (69%), Positives = 100/120 (83%), Gaps = 1/120 (0%)
Frame = +1
Query: 40 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVR 216
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIR+FA K+MGTPDVR
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 217 VDTRLNKYLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 396
+DTRLNK +W+KG+RNVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 64 IDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>BC017343-1|AAH17343.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 181 bits (441), Expect = 9e-46
Identities = 83/120 (69%), Positives = 100/120 (83%), Gaps = 1/120 (0%)
Frame = +1
Query: 40 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVR 216
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIR+FA K+MGTPDVR
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 217 VDTRLNKYLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 396
+DTRLNK +W+KG+RNVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 64 IDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>AC016738-2|AAY14823.1| 125|Homo sapiens unknown protein.
Length = 125
Score = 181 bits (441), Expect = 9e-46
Identities = 83/120 (69%), Positives = 100/120 (83%), Gaps = 1/120 (0%)
Frame = +1
Query: 40 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVR 216
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIR+FA K+MGTPDVR
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 217 VDTRLNKYLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 396
+DTRLNK +W+KG+RNVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 64 IDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>AB061830-1|BAB79468.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 181 bits (441), Expect = 9e-46
Identities = 83/120 (69%), Positives = 100/120 (83%), Gaps = 1/120 (0%)
Frame = +1
Query: 40 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVR 216
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIR+FA K+MGTPDVR
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 217 VDTRLNKYLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 396
+DTRLNK +W+KG+RNVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 64 IDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>X69181-1|CAA48925.1| 121|Homo sapiens ribosomal protein L31
protein.
Length = 121
Score = 180 bits (437), Expect = 3e-45
Identities = 82/119 (68%), Positives = 99/119 (83%), Gaps = 1/119 (0%)
Frame = +1
Query: 43 KPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVRV 219
K GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIR+FA K+MGTPDVR+
Sbjct: 1 KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRI 60
Query: 220 DTRLNKYLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 396
DTRLNK +W+KG+RNVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 61 DTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 119
>BC070210-1|AAH70210.1| 121|Homo sapiens RPL31 protein protein.
Length = 121
Score = 170 bits (413), Expect = 2e-42
Identities = 77/112 (68%), Positives = 94/112 (83%), Gaps = 1/112 (0%)
Frame = +1
Query: 40 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVR 216
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIR+FA K+MGTPDVR
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 217 VDTRLNKYLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIK 372
+DTRLNK +W+KG+RNVP+ N+DEDS +KL+TLVTYVPV + K
Sbjct: 64 IDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFK 115
>AB007180-1|BAA25839.1| 47|Homo sapiens ribosomal protein L31
protein.
Length = 47
Score = 54.8 bits (126), Expect = 1e-07
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +1
Query: 262 NVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 396
NVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 1 NVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 45
>BC035575-1|AAH35575.1| 1283|Homo sapiens peroxisome biogenesis
factor 1 protein.
Length = 1283
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +2
Query: 122 DFTVLVSRSVHPVLSRRSGDSLKNKWVLQT 211
DFTVLV R++H LSR+S S + K VL T
Sbjct: 783 DFTVLVDRAIHSRLSRQS-ISTREKLVLTT 811
>AF030356-1|AAB99758.1| 1283|Homo sapiens peroxisome biogenesis gene
1 protein.
Length = 1283
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +2
Query: 122 DFTVLVSRSVHPVLSRRSGDSLKNKWVLQT 211
DFTVLV R++H LSR+S S + K VL T
Sbjct: 783 DFTVLVDRAIHSRLSRQS-ISTREKLVLTT 811
>AF026086-1|AAB87880.1| 1283|Homo sapiens peroxisome biogenesis
disorder protein 1 protein.
Length = 1283
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +2
Query: 122 DFTVLVSRSVHPVLSRRSGDSLKNKWVLQT 211
DFTVLV R++H LSR+S S + K VL T
Sbjct: 783 DFTVLVDRAIHSRLSRQS-ISTREKLVLTT 811
>AC000064-1|AAB46346.1| 541|Homo sapiens WUGSC:H_RG083M05.1
protein.
Length = 541
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +2
Query: 122 DFTVLVSRSVHPVLSRRSGDSLKNKWVLQT 211
DFTVLV R++H LSR+S S + K VL T
Sbjct: 89 DFTVLVDRAIHSRLSRQS-ISTREKLVLTT 117
>AB052092-1|BAB59063.1| 1283|Homo sapiens Pex1pG843D protein.
Length = 1283
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +2
Query: 122 DFTVLVSRSVHPVLSRRSGDSLKNKWVLQT 211
DFTVLV R++H LSR+S S + K VL T
Sbjct: 783 DFTVLVDRAIHSRLSRQS-ISTREKLVLTT 811
>AB052091-1|BAB59062.1| 1283|Homo sapiens Pex1pL664P protein.
Length = 1283
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +2
Query: 122 DFTVLVSRSVHPVLSRRSGDSLKNKWVLQT 211
DFTVLV R++H LSR+S S + K VL T
Sbjct: 783 DFTVLVDRAIHSRLSRQS-ISTREKLVLTT 811
>AB052090-1|BAB59061.1| 1226|Homo sapiens Pex1p-634del690 protein.
Length = 1226
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +2
Query: 122 DFTVLVSRSVHPVLSRRSGDSLKNKWVLQT 211
DFTVLV R++H LSR+S S + K VL T
Sbjct: 726 DFTVLVDRAIHSRLSRQS-ISTREKLVLTT 754
>AB008112-1|BAA85162.1| 1283|Homo sapiens PEX1 protein.
Length = 1283
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +2
Query: 122 DFTVLVSRSVHPVLSRRSGDSLKNKWVLQT 211
DFTVLV R++H LSR+S S + K VL T
Sbjct: 783 DFTVLVDRAIHSRLSRQS-ISTREKLVLTT 811
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,079,656
Number of Sequences: 237096
Number of extensions: 1364031
Number of successful extensions: 2815
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2815
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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