Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_N10
         (541 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   1.7  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   1.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.0  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   5.2  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 307 HIENSKYFKCMNNIA 351
           H    KY+KC NN+A
Sbjct: 35  HTSCDKYWKCDNNVA 49


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 307 HIENSKYFKCMNNIA 351
           H    KY+KC NN+A
Sbjct: 35  HTSCDKYWKCDNNVA 49


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 387 IWLSPYPSLTNSCDIIHTFKIFT 319
           +W SP      +CD+++ F+IFT
Sbjct: 563 LWASP------TCDLMYEFQIFT 579


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 362 LQIHAILFIHLKYLLFSICG 303
           +Q H IL + L  L+F+ CG
Sbjct: 53  VQKHLILLMVLVNLIFNTCG 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,659
Number of Sequences: 336
Number of extensions: 1998
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)