Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_N09
(480 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 277 8e-75
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 277 8e-75
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 277 8e-75
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 277 8e-75
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 277 8e-75
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 272 1e-73
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 211 4e-55
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 211 4e-55
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 189 2e-48
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 189 2e-48
AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-P... 54 1e-07
AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-P... 54 1e-07
BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p pro... 52 4e-07
BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p pro... 52 4e-07
AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA... 30 1.4
BT024291-1|ABC86353.1| 638|Drosophila melanogaster IP12935p pro... 30 1.9
AE014298-1809|AAF48200.3| 681|Drosophila melanogaster CG12717-P... 30 1.9
AE014296-571|AAF47722.1| 556|Drosophila melanogaster CG14956-PA... 28 5.8
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 277 bits (678), Expect = 8e-75
Identities = 125/149 (83%), Positives = 139/149 (93%)
Frame = +1
Query: 34 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 213
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 214 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 393
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 394 IPGLTDGEVPRRLGPKRASKIRKLFNLKK 480
IPGLTD +PRRLGPKRASKIRKL+NL K
Sbjct: 121 IPGLTDTTIPRRLGPKRASKIRKLYNLSK 149
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 277 bits (678), Expect = 8e-75
Identities = 125/149 (83%), Positives = 139/149 (93%)
Frame = +1
Query: 34 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 213
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 214 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 393
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 394 IPGLTDGEVPRRLGPKRASKIRKLFNLKK 480
IPGLTD +PRRLGPKRASKIRKL+NL K
Sbjct: 121 IPGLTDTTIPRRLGPKRASKIRKLYNLSK 149
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 277 bits (678), Expect = 8e-75
Identities = 125/149 (83%), Positives = 139/149 (93%)
Frame = +1
Query: 34 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 213
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 214 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 393
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 394 IPGLTDGEVPRRLGPKRASKIRKLFNLKK 480
IPGLTD +PRRLGPKRASKIRKL+NL K
Sbjct: 121 IPGLTDTTIPRRLGPKRASKIRKLYNLSK 149
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 277 bits (678), Expect = 8e-75
Identities = 125/149 (83%), Positives = 139/149 (93%)
Frame = +1
Query: 34 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 213
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 214 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 393
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 394 IPGLTDGEVPRRLGPKRASKIRKLFNLKK 480
IPGLTD +PRRLGPKRASKIRKL+NL K
Sbjct: 121 IPGLTDTTIPRRLGPKRASKIRKLYNLSK 149
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 277 bits (678), Expect = 8e-75
Identities = 125/149 (83%), Positives = 139/149 (93%)
Frame = +1
Query: 34 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 213
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 214 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 393
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 394 IPGLTDGEVPRRLGPKRASKIRKLFNLKK 480
IPGLTD +PRRLGPKRASKIRKL+NL K
Sbjct: 121 IPGLTDTTIPRRLGPKRASKIRKLYNLSK 149
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 272 bits (668), Expect = 1e-73
Identities = 123/147 (83%), Positives = 137/147 (93%)
Frame = +1
Query: 40 LNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFP 219
LNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQGFP
Sbjct: 6 LNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFP 65
Query: 220 MKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIP 399
MKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++IP
Sbjct: 66 MKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIP 125
Query: 400 GLTDGEVPRRLGPKRASKIRKLFNLKK 480
GLTD +PRRLGPKRASKIRKL+NL K
Sbjct: 126 GLTDTTIPRRLGPKRASKIRKLYNLSK 152
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 211 bits (515), Expect = 4e-55
Identities = 95/118 (80%), Positives = 108/118 (91%)
Frame = +1
Query: 127 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 306
MG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 307 RKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLKK 480
RKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPKRASKIRKL+NL K
Sbjct: 61 RKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSK 118
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 211 bits (515), Expect = 4e-55
Identities = 95/118 (80%), Positives = 108/118 (91%)
Frame = +1
Query: 127 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 306
MG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 307 RKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLKK 480
RKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPKRASKIRKL+NL K
Sbjct: 61 RKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSK 118
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 189 bits (460), Expect = 2e-48
Identities = 95/147 (64%), Positives = 112/147 (76%)
Frame = +1
Query: 34 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 213
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 214 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 393
FPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS- 118
Query: 394 IPGLTDGEVPRRLGPKRASKIRKLFNL 474
P RLGP R+S I K++ L
Sbjct: 119 ---------PCRLGPVRSSNISKIYYL 136
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 189 bits (460), Expect = 2e-48
Identities = 95/147 (64%), Positives = 112/147 (76%)
Frame = +1
Query: 34 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 213
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 214 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 393
FPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS- 118
Query: 394 IPGLTDGEVPRRLGPKRASKIRKLFNL 474
P RLGP R+S I K++ L
Sbjct: 119 ---------PCRLGPVRSSNISKIYYL 136
>AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-PA
protein.
Length = 135
Score = 54.0 bits (124), Expect = 1e-07
Identities = 34/78 (43%), Positives = 46/78 (58%)
Frame = +1
Query: 241 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEV 420
N R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 5 NRRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS---------- 53
Query: 421 PRRLGPKRASKIRKLFNL 474
P RLGP R+S I K++ L
Sbjct: 54 PCRLGPVRSSNISKIYYL 71
>AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-PA
protein.
Length = 135
Score = 54.0 bits (124), Expect = 1e-07
Identities = 34/78 (43%), Positives = 46/78 (58%)
Frame = +1
Query: 241 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEV 420
N R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 5 NRRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS---------- 53
Query: 421 PRRLGPKRASKIRKLFNL 474
P RLGP R+S I K++ L
Sbjct: 54 PCRLGPVRSSNISKIYYL 71
>BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p
protein.
Length = 149
Score = 52.0 bits (119), Expect = 4e-07
Identities = 33/76 (43%), Positives = 45/76 (59%)
Frame = +1
Query: 247 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 426
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K P
Sbjct: 21 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 69
Query: 427 RLGPKRASKIRKLFNL 474
RLGP R+S I K++ L
Sbjct: 70 RLGPVRSSNISKIYYL 85
>BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p
protein.
Length = 147
Score = 52.0 bits (119), Expect = 4e-07
Identities = 33/76 (43%), Positives = 45/76 (59%)
Frame = +1
Query: 247 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 426
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K P
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 67
Query: 427 RLGPKRASKIRKLFNL 474
RLGP R+S I K++ L
Sbjct: 68 RLGPVRSSNISKIYYL 83
>AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA
protein.
Length = 1399
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 211 PACRYRRQHGEHNLSIRRLEDLHQLQRPYAFHRRYGACAHPPLQ 80
PA +QH +H L+ R ++ + P HR GA A P+Q
Sbjct: 1035 PASNLNKQHADHYLANERKDNALDYKPPVPPHRNVGARACLPVQ 1078
>BT024291-1|ABC86353.1| 638|Drosophila melanogaster IP12935p
protein.
Length = 638
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 289 PRRDGERKR-KSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGP 438
P ER R + R I+ ++ A+V+V G +E DG+ RRL P
Sbjct: 271 PAERAERSRLRRNRNWILSRDVDEDAVVLVSSGDEETTAADDGQTERRLSP 321
>AE014298-1809|AAF48200.3| 681|Drosophila melanogaster CG12717-PA
protein.
Length = 681
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 289 PRRDGERKR-KSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGP 438
P ER R + R I+ ++ A+V+V G +E DG+ RRL P
Sbjct: 314 PAERAERSRLRRNRNWILSRDVDEDAVVLVSSGDEETTAADDGQTERRLSP 364
>AE014296-571|AAF47722.1| 556|Drosophila melanogaster CG14956-PA
protein.
Length = 556
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -3
Query: 145 HQLQRPYAFHRRYGACAHPP-LQITSDIPLPGMKRSTS*LRSVPSNVP 5
H L A H + PP ++ + P P + ST L SVPS+ P
Sbjct: 147 HHLHHQSAVHHHHHLLTVPPRIERHASEPAPSLAPSTPHLLSVPSSTP 194
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,108,461
Number of Sequences: 53049
Number of extensions: 442803
Number of successful extensions: 1108
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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