Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_N08
(342 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC049205-1|AAH49205.1| 432|Homo sapiens CDT1 protein protein. 28 6.6
BC021126-1|AAH21126.1| 408|Homo sapiens CDT1 protein protein. 28 6.6
BC016829-1|AAH16829.1| 391|Homo sapiens IL23R protein protein. 28 6.6
BC014202-1|AAH14202.2| 317|Homo sapiens CDT1 protein protein. 28 6.6
BC009410-1|AAH09410.1| 546|Homo sapiens chromatin licensing and... 28 6.6
BC008860-1|AAH08860.2| 528|Homo sapiens CDT1 protein protein. 28 6.6
BC008676-1|AAH08676.1| 510|Homo sapiens CDT1 protein protein. 28 6.6
BC000137-1|AAH00137.2| 546|Homo sapiens chromatin licensing and... 28 6.6
AY937255-1|AAY18350.1| 320|Homo sapiens interleukin 23 receptor... 28 6.6
AY937253-1|AAY18348.1| 320|Homo sapiens interleukin 23 receptor... 28 6.6
AY937252-1|AAY18347.1| 375|Homo sapiens interleukin 23 receptor... 28 6.6
AY937250-1|AAY18345.1| 593|Homo sapiens interleukin 23 receptor... 28 6.6
AL389925-4|CAH70408.1| 390|Homo sapiens interleukin 23 receptor... 28 6.6
AL389925-2|CAH70406.1| 629|Homo sapiens interleukin 23 receptor... 28 6.6
AL109843-2|CAI22679.1| 390|Homo sapiens interleukin 23 receptor... 28 6.6
AL109843-1|CAI22678.1| 629|Homo sapiens interleukin 23 receptor... 28 6.6
AF461422-1|AAM44229.1| 629|Homo sapiens interleukin-23 receptor... 28 6.6
AF321125-1|AAG45181.1| 546|Homo sapiens DNA replication factor ... 28 6.6
AB053172-1|BAB61878.1| 546|Homo sapiens Cdt1 protein. 28 6.6
AL138764-6|CAM15086.1| 321|Homo sapiens phytanoyl-CoA 2-hydroxy... 28 8.7
AL138764-4|CAI12910.1| 296|Homo sapiens phytanoyl-CoA 2-hydroxy... 28 8.7
>BC049205-1|AAH49205.1| 432|Homo sapiens CDT1 protein protein.
Length = 432
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 212 RLAESAARCTL*CVVRNLGSTARSPLPTSPPATPRQINPNAL 337
R+ ++ ++ L + + R LP +PPATP +P+AL
Sbjct: 260 RMEKALSQLALRSAAPSSPGSPRPALPATPPATPPAASPSAL 301
>BC021126-1|AAH21126.1| 408|Homo sapiens CDT1 protein protein.
Length = 408
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 212 RLAESAARCTL*CVVRNLGSTARSPLPTSPPATPRQINPNAL 337
R+ ++ ++ L + + R LP +PPATP +P+AL
Sbjct: 236 RMEKALSQLALRSAAPSSPGSPRPALPATPPATPPAASPSAL 277
>BC016829-1|AAH16829.1| 391|Homo sapiens IL23R protein protein.
Length = 391
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 269 NLNYVRHITKYNEPQIRRVSRFRCEET 189
N YV+ Y EP I+ V + RC+ET
Sbjct: 35 NFTYVQQSEFYLEPNIKYVFQVRCQET 61
>BC014202-1|AAH14202.2| 317|Homo sapiens CDT1 protein protein.
Length = 317
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 212 RLAESAARCTL*CVVRNLGSTARSPLPTSPPATPRQINPNAL 337
R+ ++ ++ L + + R LP +PPATP +P+AL
Sbjct: 145 RMEKALSQLALRSAAPSSPGSPRPALPATPPATPPAASPSAL 186
>BC009410-1|AAH09410.1| 546|Homo sapiens chromatin licensing and
DNA replication factor 1 protein.
Length = 546
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 212 RLAESAARCTL*CVVRNLGSTARSPLPTSPPATPRQINPNAL 337
R+ ++ ++ L + + R LP +PPATP +P+AL
Sbjct: 374 RMEKALSQLALRSAAPSSPGSPRPALPATPPATPPAASPSAL 415
>BC008860-1|AAH08860.2| 528|Homo sapiens CDT1 protein protein.
Length = 528
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 212 RLAESAARCTL*CVVRNLGSTARSPLPTSPPATPRQINPNAL 337
R+ ++ ++ L + + R LP +PPATP +P+AL
Sbjct: 356 RMEKALSQLALRSAAPSSPGSPRPALPATPPATPPAASPSAL 397
>BC008676-1|AAH08676.1| 510|Homo sapiens CDT1 protein protein.
Length = 510
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 212 RLAESAARCTL*CVVRNLGSTARSPLPTSPPATPRQINPNAL 337
R+ ++ ++ L + + R LP +PPATP +P+AL
Sbjct: 338 RMEKALSQLALRSAAPSSPGSPRPALPATPPATPPAASPSAL 379
>BC000137-1|AAH00137.2| 546|Homo sapiens chromatin licensing and
DNA replication factor 1 protein.
Length = 546
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 212 RLAESAARCTL*CVVRNLGSTARSPLPTSPPATPRQINPNAL 337
R+ ++ ++ L + + R LP +PPATP +P+AL
Sbjct: 374 RMEKALSQLALRSAAPSSPGSPRPALPATPPATPPAASPSAL 415
>AY937255-1|AAY18350.1| 320|Homo sapiens interleukin 23 receptor
isoform 4 protein.
Length = 320
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 269 NLNYVRHITKYNEPQIRRVSRFRCEET 189
N YV+ Y EP I+ V + RC+ET
Sbjct: 237 NFTYVQQSEFYLEPNIKYVFQVRCQET 263
>AY937253-1|AAY18348.1| 320|Homo sapiens interleukin 23 receptor
isoform 3 F1 protein.
Length = 320
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 269 NLNYVRHITKYNEPQIRRVSRFRCEET 189
N YV+ Y EP I+ V + RC+ET
Sbjct: 237 NFTYVQQSEFYLEPNIKYVFQVRCQET 263
>AY937252-1|AAY18347.1| 375|Homo sapiens interleukin 23 receptor
isoform 2 F2 protein.
Length = 375
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 269 NLNYVRHITKYNEPQIRRVSRFRCEET 189
N YV+ Y EP I+ V + RC+ET
Sbjct: 19 NFTYVQQSEFYLEPNIKYVFQVRCQET 45
>AY937250-1|AAY18345.1| 593|Homo sapiens interleukin 23 receptor
isoform 1 protein.
Length = 593
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 269 NLNYVRHITKYNEPQIRRVSRFRCEET 189
N YV+ Y EP I+ V + RC+ET
Sbjct: 237 NFTYVQQSEFYLEPNIKYVFQVRCQET 263
>AL389925-4|CAH70408.1| 390|Homo sapiens interleukin 23 receptor
protein.
Length = 390
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 269 NLNYVRHITKYNEPQIRRVSRFRCEET 189
N YV+ Y EP I+ V + RC+ET
Sbjct: 34 NFTYVQQSEFYLEPNIKYVFQVRCQET 60
>AL389925-2|CAH70406.1| 629|Homo sapiens interleukin 23 receptor
protein.
Length = 629
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 269 NLNYVRHITKYNEPQIRRVSRFRCEET 189
N YV+ Y EP I+ V + RC+ET
Sbjct: 273 NFTYVQQSEFYLEPNIKYVFQVRCQET 299
>AL109843-2|CAI22679.1| 390|Homo sapiens interleukin 23 receptor
protein.
Length = 390
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 269 NLNYVRHITKYNEPQIRRVSRFRCEET 189
N YV+ Y EP I+ V + RC+ET
Sbjct: 34 NFTYVQQSEFYLEPNIKYVFQVRCQET 60
>AL109843-1|CAI22678.1| 629|Homo sapiens interleukin 23 receptor
protein.
Length = 629
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 269 NLNYVRHITKYNEPQIRRVSRFRCEET 189
N YV+ Y EP I+ V + RC+ET
Sbjct: 273 NFTYVQQSEFYLEPNIKYVFQVRCQET 299
>AF461422-1|AAM44229.1| 629|Homo sapiens interleukin-23 receptor
protein.
Length = 629
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 269 NLNYVRHITKYNEPQIRRVSRFRCEET 189
N YV+ Y EP I+ V + RC+ET
Sbjct: 273 NFTYVQQSEFYLEPNIKYVFQVRCQET 299
>AF321125-1|AAG45181.1| 546|Homo sapiens DNA replication factor
protein.
Length = 546
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 212 RLAESAARCTL*CVVRNLGSTARSPLPTSPPATPRQINPNAL 337
R+ ++ ++ L + + R LP +PPATP +P+AL
Sbjct: 374 RMEKALSQLALRSAAPSSPGSPRPALPATPPATPPAASPSAL 415
>AB053172-1|BAB61878.1| 546|Homo sapiens Cdt1 protein.
Length = 546
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 212 RLAESAARCTL*CVVRNLGSTARSPLPTSPPATPRQINPNAL 337
R+ ++ ++ L + + R LP +PPATP +P+AL
Sbjct: 374 RMEKALSQLALRSAAPSSPGSPRPALPATPPATPPAASPSAL 415
>AL138764-6|CAM15086.1| 321|Homo sapiens phytanoyl-CoA
2-hydroxylase protein.
Length = 321
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -2
Query: 125 FANVSLLAMHIYGCNKKIREGNCNLLSLHKWQKVEFHFLP 6
F +++AMH NK GNC S H + + H+ P
Sbjct: 127 FTGPNIMAMHTMLINKPPDSGNCKKTSRHPLHQ-DLHYFP 165
>AL138764-4|CAI12910.1| 296|Homo sapiens phytanoyl-CoA
2-hydroxylase protein.
Length = 296
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -2
Query: 125 FANVSLLAMHIYGCNKKIREGNCNLLSLHKWQKVEFHFLP 6
F +++AMH NK GNC S H + + H+ P
Sbjct: 164 FTGPNIMAMHTMLINKPPDSGNCKKTSRHPLHQ-DLHYFP 202
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,314,813
Number of Sequences: 237096
Number of extensions: 968844
Number of successful extensions: 2711
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2711
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1910415606
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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