Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_N07
         (508 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   2.7  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   8.4  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   8.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.4  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   8.4  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   8.4  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 80  VLFIFVECITSSFDKRHTLVA 18
           ++ I  +CITSS    +T +A
Sbjct: 228 LILILAKCITSSLSSLYTCIA 248


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu
          protein.
          Length = 322

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +3

Query: 15 ERYERMPFVKTGCDTFDKYEKN 80
          + Y+  PF+ + CD     E+N
Sbjct: 17 QNYKTNPFLASDCDKNQNTEQN 38


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
          transcription factor Fushitarazu protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +3

Query: 15 ERYERMPFVKTGCDTFDKYEKN 80
          + Y+  PF+ + CD     E+N
Sbjct: 17 QNYKTNPFLASDCDKNQNTEQN 38


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 61  STNMKRTLSTLWIHSK*NLVCP 126
           S N+   L  +W  SK  L+CP
Sbjct: 3   SENITDVLKHVWFLSKLFLLCP 24


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 212 RLRHCQENVFNSTGAE 165
           RLR   +N+F  TG E
Sbjct: 331 RLRSLPDNLFRETGLE 346


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 63  DKYEKNVIDFMDTLK 107
           D + K V DF +TLK
Sbjct: 271 DAFLKEVADFQETLK 285


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 63  DKYEKNVIDFMDTLK 107
           D + K V DF +TLK
Sbjct: 271 DAFLKEVADFQETLK 285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,762
Number of Sequences: 336
Number of extensions: 1987
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)