Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_N06
(464 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15) 72 3e-13
SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33) 60 7e-10
SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23) 60 1e-09
SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08) 59 2e-09
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-08
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 56 1e-08
SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32) 54 6e-08
SB_8042| Best HMM Match : DUF803 (HMM E-Value=0) 52 2e-07
SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34) 52 3e-07
SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05) 51 4e-07
SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10) 47 7e-06
SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11) 46 2e-05
SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 6e-05
SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022) 42 3e-04
SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.003
SB_5928| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11) 37 0.007
SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083) 36 0.012
SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 36 0.012
SB_32677| Best HMM Match : SapB_1 (HMM E-Value=4.1) 36 0.017
SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08) 35 0.029
SB_5208| Best HMM Match : adh_short (HMM E-Value=1.1e-05) 35 0.029
SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07) 32 0.27
SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0) 31 0.36
SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.47
SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.47
SB_58812| Best HMM Match : Paramecium_SA (HMM E-Value=3.4) 30 0.82
SB_30263| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.82
SB_29917| Best HMM Match : Chlorovi_GP_rpt (HMM E-Value=2.6) 30 0.82
SB_30233| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_20705| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_36982| Best HMM Match : adh_short (HMM E-Value=1.4e-05) 27 5.8
SB_9398| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
>SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15)
Length = 355
Score = 71.7 bits (168), Expect = 3e-13
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Frame = +3
Query: 9 GKVALVXXXXXXXXXXXXXQFTKEGAQVAIVGRNVTKLEKVAGECTANGKKP-------- 164
G+V + + K G ++ + R ++LE+V +C A K+
Sbjct: 42 GRVCWITGASSGIGENLAYELAKFGCKLVLSARRRSELERVKEQCIAIAKEANTSYNADQ 101
Query: 165 --LIIKADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKQGSLLEGNLLEAYDTVMATN 338
L++ D++ D+ + +V +D F KIDIL+NN+G ++G +E +E ++ N
Sbjct: 102 DILVLPMDVTEYDKHTELVRSVLDHFNKIDILINNSGRSQRGLAVETPGIEVEKAMLDLN 161
Query: 339 LRAVIQLTNLATPHIVE-ANGNIINISSTVATQNSTALTAY 458
AV+ LT PH++E NG+I+ SS + T+Y
Sbjct: 162 FLAVVSLTKAVLPHMIERKNGHIVVTSSVAGKIGAPMSTSY 202
>SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33)
Length = 717
Score = 60.5 bits (140), Expect = 7e-10
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Frame = +3
Query: 9 GKVALVXXXXXXXXXXXXXQFTKEGAQVAI---------VGRNVTKLEKVAGECTANGKK 161
G+V LV F + GA V + G++ +KV E A G K
Sbjct: 10 GRVVLVTGAGNGLGRQYALAFAERGASVVVNDLGGDTKGEGKSGRAADKVVQEIRAKGGK 69
Query: 162 PLIIKADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKQGSLLEGNLLEAYDTVMATNL 341
+ AD ++ ++ +V I AFG+ID++VNNAG+++ S+L + L+ +D V +L
Sbjct: 70 AV---ADYNSVEQGDQVVETAIKAFGRIDVVVNNAGILRDKSILRMSELD-WDLVQRVHL 125
Query: 342 RAVIQLTNLATPHIVEAN-GNIINISST 422
+ +T A PH+ + G II +ST
Sbjct: 126 KGSFLVTRAAWPHMKKQKFGRIIMTTST 153
>SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23)
Length = 228
Score = 59.7 bits (138), Expect = 1e-09
Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 1/152 (0%)
Frame = +3
Query: 9 GKVALVXXXXXXXXXXXXXQFTKEGAQVAIVGRNVTKLEKVAGECTANGKKPLIIKADLS 188
GK+ + F+ +G V GR+ K+ ++ + GK D++
Sbjct: 2 GKIVAITGVSTGLGLALTKWFSSQGHTVVGCGRSAAKIAEMNEKYCGKGKPNQFYVVDIT 61
Query: 189 NQDEVSTIVSKTIDAFGKIDILVNNAGMIKQGSLLEGNLLEAYDTVMATNLRAVIQLTNL 368
+ V + +FG D ++NNAG + Q + L E +D V+ NL+ +
Sbjct: 62 DDSVVKEWATNVCKSFGPPDFVLNNAGFVNQNAPLWEITAEEFDKVVDVNLKGSANVIRS 121
Query: 369 ATPHIVEA-NGNIINISSTVATQNSTALTAYC 461
P +++A G I+N SS + YC
Sbjct: 122 FLPKMIKAGKGVIVNFSSGYGKAGKAKMAPYC 153
>SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08)
Length = 272
Score = 58.8 bits (136), Expect = 2e-09
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Frame = +3
Query: 123 EKVAGECTA-NGKKPLIIKADLSN--QDEVSTIVSKTIDAFGKIDILVNNAGMI---KQG 284
EK+ E + +++KADLS Q+ ++ T+ AFG++D+LVNNA + G
Sbjct: 51 EKIVQEMNSVRSDSAIMLKADLSTNIQETARKLIEDTVTAFGQLDLLVNNASQFCPTESG 110
Query: 285 SLLEGNLLEAYDTVMATNLRAVIQLTNLATPHIVEANGNIINISSTVATQNSTALTAYCI 464
S+ E E ++ +M NL L+ A PH+ ++G+IIN+ A + + YC+
Sbjct: 111 SVQE----ETWNKLMGVNLSFPFFLSQAAFPHLKRSHGSIINMIDIHAERPLANHSVYCV 166
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 56.4 bits (130), Expect = 1e-08
Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Frame = +3
Query: 105 RNVTKLEKVAGECTANGKKPLIIKA-DLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKQ 281
RN+ K + + +C+ + L IK D+ + + V +V++ ++ G+ID+LVNNAG I
Sbjct: 69 RNLGKKDALLEKCSGVVEDLLNIKELDVCSDESVKAVVAEIVEKEGRIDVLVNNAG-IGL 127
Query: 282 GSLLEGNLLEAYDTVMATNLRAVIQLTNLATPHIVEAN-GNIINISSTVATQNSTALTAY 458
+ E +A + V N+ ++++TN PH+ + G+++NI S + + Y
Sbjct: 128 FCVPECATTDAINKVFEPNVYGLMRMTNAVIPHMKKQRAGHVVNIGSVLGIVGTPFSEIY 187
Query: 459 C 461
C
Sbjct: 188 C 188
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 56.0 bits (129), Expect = 1e-08
Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 5/155 (3%)
Frame = +3
Query: 12 KVALVXXXXXXXXXXXXXQFTKEGAQ---VAIVGRNVTKLEKVAGEC-TANGKKPLIIKA 179
KVA++ K+G + V RN+ K + C A G I +
Sbjct: 4 KVAVITGCSSGIGLATASILAKDGEKRFRVYATMRNLDKKGSLESACQNALGDTLFIREL 63
Query: 180 DLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKQGSLLEGNLLEAYDTVMATNLRAVIQL 359
D+S+ D V ++ + G+IDILVNNAG+ G +LE TN V+++
Sbjct: 64 DVSSDDSVEEALNAIYEEEGRIDILVNNAGISHIG-MLETQTQSLVKETFNTNFFGVLRM 122
Query: 360 TNLATPHI-VEANGNIINISSTVATQNSTALTAYC 461
+ P + + +G+IINISST YC
Sbjct: 123 SKAVIPRMKSDHSGHIINISSTAGHTGMPFTGLYC 157
>SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32)
Length = 728
Score = 54.0 bits (124), Expect = 6e-08
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 1/153 (0%)
Frame = +3
Query: 6 RGKVALVXXXXXXXXXXXXXQFTKEGAQVAIVGRNVTKLEKVAGECTANGKKPLIIKADL 185
RG+ L+ K+G ++ + N+ L+ VA E G + + D+
Sbjct: 34 RGETVLITGAASGIGRLTALILAKKGCKLVLWDINLEALKAVAQEIQDLGAETHYFECDV 93
Query: 186 SNQDEVSTIVSKTIDAFGKIDILVNNAGMIKQGSLLEGNLLEAYDTVMATNLRAVIQLTN 365
+DEV + + D G + IL+NNAG++ L + + T +L A I
Sbjct: 94 RKKDEVEKVANAVEDQAGNVTILINNAGVVTGKKFLNCSESDVMRTFQVNSL-AHIWTIQ 152
Query: 366 LATPHIVEAN-GNIINISSTVATQNSTALTAYC 461
P ++E N G+I++I+S YC
Sbjct: 153 RFIPSMMEKNRGHIVSIASVAGYFGLVGCVDYC 185
>SB_8042| Best HMM Match : DUF803 (HMM E-Value=0)
Length = 603
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/113 (23%), Positives = 59/113 (52%)
Frame = +3
Query: 9 GKVALVXXXXXXXXXXXXXQFTKEGAQVAIVGRNVTKLEKVAGECTANGKKPLIIKADLS 188
G+VA+V + G +VA+ R +L ++ E ANG + +K D++
Sbjct: 104 GQVAIVTGASSGIGAAVAKALAEAGVKVALAARREERLTQLRDEIIANGDVAISVKTDVT 163
Query: 189 NQDEVSTIVSKTIDAFGKIDILVNNAGMIKQGSLLEGNLLEAYDTVMATNLRA 347
++++ ++V +T G +DILV+ AG++ +++ ++ ++ ++ N +A
Sbjct: 164 IKEQMESLVKRTDSTLGPVDILVSCAGVMYY-QMMKNCAMKDWEQMVDINCKA 215
>SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34)
Length = 253
Score = 51.6 bits (118), Expect = 3e-07
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Frame = +3
Query: 105 RNVTKLEKVAGECTANGKKPLIIKADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKQG 284
R E + E T G + + ++AD++++ +V + ++ FG++D+LVNNAG+++
Sbjct: 40 RQQAAAEALVSEITQAGGRAIAVQADVADERQVMQLFARLDQHFGRLDVLVNNAGILETQ 99
Query: 285 SLLEGNLLEAYDTVMATNLRAVIQLTNLATPHIVEANGN----IINISSTVA 428
LE L + V ATN+ A + G I+N+SS A
Sbjct: 100 MRLEQMELARWQRVFATNVFGSFLCCREAIKRMSTRQGGNGGAIVNLSSAAA 151
>SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05)
Length = 201
Score = 51.2 bits (117), Expect = 4e-07
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Frame = +3
Query: 165 LIIKADLSNQDEVSTIVSKTIDAFGKIDILVNNAGM-IKQGSLLEGNLLEAYDTVMATNL 341
L IK D+++Q ++ +T D FG++DIL NNAG+ +++ LL A+ T++ N+
Sbjct: 59 LFIKCDVTSQPQMEAAFQRTKDVFGRLDILCNNAGIAVRENDLLRSG---AWKTIIDINV 115
Query: 342 RAVIQLTNLATPHIVEA-----NGNIINISS 419
+ VI T L H+ + G I+N++S
Sbjct: 116 KGVILGTLLGLDHMGVSGAKGHGGTIVNVAS 146
>SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10)
Length = 289
Score = 47.2 bits (107), Expect = 7e-06
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Frame = +3
Query: 132 AGECTANGKKPLIIKADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKQGSLLEGNLLE 311
A E ++G + I++ DL N E + + K I G+ID+LVNNAG + + L+ +
Sbjct: 80 AREVVSHGVRAEIVQLDLGNLPEGALALEKLIQRLGRIDVLVNNAGAMTKAPFLD-MAFD 138
Query: 312 AYDTVMATNLRAVIQLTNLATPHIVE--ANGNIINISS 419
+ + ++ + +A +V+ G IINI+S
Sbjct: 139 EWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITS 176
>SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11)
Length = 236
Score = 45.6 bits (103), Expect = 2e-05
Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 2/133 (1%)
Frame = +3
Query: 69 FTKEGAQVAIVGRNVTKLEKVAGECTANGKKPLIIKADLSNQDEVSTIVSKTIDAFGKID 248
F G V R+ K+EK+ E + +K D+SN + V + + FG
Sbjct: 27 FNANGHTVIGCARSHDKIEKINEEFASGKEKRQFYVVDISNDEAVKQWSQQVMLDFGAPS 86
Query: 249 ILVNNAGMIKQGSLLEGNLLEAYDTVMATNLRAVIQLTNLATPHIVEA--NGNIINISST 422
+L+NN+G+ + + E ++ V+ N++ + P ++EA G I+N +S
Sbjct: 87 LLINNSGVTNKNANFWEVPTEEFNKVVDINIKGTANVLRHFLPSMIEAKRKGVIVNFTSG 146
Query: 423 VATQNSTALTAYC 461
+ + YC
Sbjct: 147 WGRCVAPEVAPYC 159
>SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 44.0 bits (99), Expect = 6e-05
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Frame = +3
Query: 165 LIIKA-DLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKQGSLLEGNLLEAYDTVMATNL 341
LI+K D+++ + V+ ++ A +ID+LVNNAG+ G +LE + + + N
Sbjct: 251 LIVKQLDVTSDESVTEVLQSIYSAERRIDVLVNNAGVGLIG-VLETHTMSLVREMFNVNF 309
Query: 342 RAVIQLTNLATPHIV-EANGNIINISSTVATQNSTALTAYC 461
V++LT P + +G+IINI S + YC
Sbjct: 310 FGVVRLTKAVIPKMKGNPSGHIINIPSIGGIRGVPFNAIYC 350
>SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022)
Length = 233
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +3
Query: 252 LVNNAGMIKQGSLLEGNLLEAYDTVMATNLRAVIQLTNLATPHIVEANGNIINISSTVAT 431
LVNNAG+ G + E +E Y + NL +++T P + G ++NISS
Sbjct: 41 LVNNAGVFIPGPV-EWMTVEEYKQIAEVNLWGTVRMTKAFLPLLKREKGRVVNISSVAGM 99
Query: 432 QNSTALTAYCI 464
+AYCI
Sbjct: 100 VPLQRSSAYCI 110
>SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 39.5 bits (88), Expect = 0.001
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +3
Query: 9 GKVALVXXXXXXXXXXXXXQFTKEGAQVAIVGRNVTKLEKVAGECTANGKKPLIIKADLS 188
G+VA+V + +EGA VAI+ N ++V + ++G K D++
Sbjct: 24 GRVAIVTGGASGIGKATVERLAREGASVAILDINDELGQQVETDLRSSGNKVKFYHVDVA 83
Query: 189 NQDEVSTIVS-KTIDAFGKIDILVNNA 266
N+D + +V D + ILVNNA
Sbjct: 84 NKDMCAHVVGCVAADHGSAVHILVNNA 110
>SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 39.5 bits (88), Expect = 0.001
Identities = 30/143 (20%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Frame = +3
Query: 6 RGKVALVXXXXXXXXXXXXXQFTKEGAQVAIVGRNVTKLEKVAGECTANGKKPLIIKADL 185
+ KV ++ +EGA+V N KL+++ + G + ++ D+
Sbjct: 15 KNKVVVLSAAAQGIGKATALACAREGAKVIATDINAEKLKELH---SVPGIETRVV--DV 69
Query: 186 SNQDEVSTIVSKTIDAFGKIDILVNNAGMIKQGSLLEGNLLEAYDTVMATNLRAVIQLTN 365
++ + + S+ +D ++D+L N AG++ G++ E + + +D M N++++ ++T
Sbjct: 70 TDYEAIKKFASE-VD---RVDVLFNCAGLVLGGNIEECS-EKQWDLTMDLNVKSMFRMTK 124
Query: 366 LATPHI-VEANGNIINISSTVAT 431
P + + +G+IIN++S ++
Sbjct: 125 ECIPKMRQQGSGSIINMASVASS 147
>SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 39.1 bits (87), Expect = 0.002
Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 3/153 (1%)
Frame = +3
Query: 9 GKVALVXXXXXXXXXXXXXQFTKEGAQVAIVGRNVTKLEKVAGECTANGKKPLIIKA--D 182
GK +V + + GA+V + R++ EK A E K ++ D
Sbjct: 68 GKTVIVTGANSGIGKATALELARRGARVIMACRDLESAEKAASEIRYKVPKAEVVCRFLD 127
Query: 183 LSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKQGSLLEGNLLEAYDTVMATNLRAVIQLT 362
L++ V + ++DILVNNAG+ + + ++ ++T N LT
Sbjct: 128 LNSLISVRKFAEDVMREEKRLDILVNNAGVYQPAN---KKTVDGFETQFGVNHLGHFLLT 184
Query: 363 NLATPHI-VEANGNIINISSTVATQNSTALTAY 458
N+ + A I+ +SS + + + A+
Sbjct: 185 NMLLDLLKASAPSRIVVVSSRLGFRANLDFDAF 217
>SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 614
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/72 (30%), Positives = 38/72 (52%)
Frame = +3
Query: 174 KADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKQGSLLEGNLLEAYDTVMATNLRAVI 353
K D+++ D + + + +G +DILVNNAG++K+ S +A D V TN ++
Sbjct: 78 KLDVTSNDSIHELTLHVQEKYGGLDILVNNAGILKKESSGTSYARKAEDCV-KTNFFGML 136
Query: 354 QLTNLATPHIVE 389
+ N P + E
Sbjct: 137 DVYNSMYPLLKE 148
>SB_5928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 37.5 bits (83), Expect = 0.005
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Frame = +3
Query: 171 IKADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKQ---GSLLEGNLLEAYD 320
I D+SNQD++ +T+ G +DI+ NNAG++ + L+ NLL + +
Sbjct: 53 ISCDVSNQDQLKDAFWETVSTHGHLDIVFNNAGILDEERWSKTLDVNLLNSIE 105
>SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11)
Length = 305
Score = 37.1 bits (82), Expect = 0.007
Identities = 33/164 (20%), Positives = 69/164 (42%), Gaps = 14/164 (8%)
Frame = +3
Query: 12 KVALVXXXXXXXXXXXXXQFTKEGAQVAIVGRNVTKLEKVAGECTANGKKPLIIKADLSN 191
++ L+ +F K GA++ V N ++ + +K K D S+
Sbjct: 54 EIVLITGAGSGIGKGMAIEFAKIGAKIVCVDINKQANDQTVEVIKSLNQKAFGYKCDCSS 113
Query: 192 QDEVSTIVSKTIDAFGKIDILVNNAGMIKQGSLL--EGNLLE--------AYDTVMATN- 338
++++ + G++ ILVNNAG++ L E +++ A+ ++A N
Sbjct: 114 REDIYRVADIVKREVGEVTILVNNAGIVSGKKFLDTEDWMIQKTMEVNTMAHFWILALNP 173
Query: 339 --LRAVIQLTNLATPHIVEAN-GNIINISSTVATQNSTALTAYC 461
+ +Q P ++ N G+++NI+S+ + YC
Sbjct: 174 DYIVFTLQTVKSFLPSMLAKNHGHVVNIASSAGFFGVPGMCDYC 217
>SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083)
Length = 133
Score = 36.3 bits (80), Expect = 0.012
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Frame = +3
Query: 195 DEVSTI--VSKTIDAFGKIDILVNNAGMIKQGSLLEGNLLEAYDTVMATNLRAVIQLTNL 368
D+V+ I + K I++ D+LVNNAG S LE E++D + TN+RA + +
Sbjct: 9 DDVADIEKMQKLIESQETFDLLVNNAGFAIFESFLEIK-PESFDRMHETNVRAPLFIAQA 67
Query: 369 ATPHIVE--ANGNIINISS 419
+V G I+N+SS
Sbjct: 68 VAKKMVAKGEGGAIVNVSS 86
>SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 1750
Score = 36.3 bits (80), Expect = 0.012
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Frame = +3
Query: 123 EKVAGECTANGKKPLIIKADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKQGSLLEGN 302
E V CT P + + ++E+ S+ G +DILVNNAG++ LL+
Sbjct: 1263 ETVVPTCTTESP-PAVASTPV--REEIYATASRVKGEVGDVDILVNNAGILHGKRLLDQT 1319
Query: 303 LLEAYDTVMATNLRAVIQLTNLATPHIVEAN-GNIINISSTVATQNSTALTAYC 461
+ + NL A + ++E N G+I+ ISS + + YC
Sbjct: 1320 DAQIQKAI-ELNLLAHFWTSRSFLGRMLEQNQGHIVTISSVSGSFPTAFQVEYC 1372
>SB_32677| Best HMM Match : SapB_1 (HMM E-Value=4.1)
Length = 256
Score = 35.9 bits (79), Expect = 0.017
Identities = 14/37 (37%), Positives = 26/37 (70%)
Frame = +3
Query: 171 IKADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKQ 281
I+ D+ N++++S + +T+ K+DIL NNAG+I +
Sbjct: 95 IECDVCNREKLSEAIRQTVKDHSKLDILCNNAGIIDE 131
>SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08)
Length = 316
Score = 35.1 bits (77), Expect = 0.029
Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 6/143 (4%)
Frame = +3
Query: 9 GKVALVXXXXXXXXXXXXXQFTKEGAQVAIVGRNVTKLEKVAGECTAN-GKKPLIIK--- 176
GK ++ K GA+V I RN+ + + A+ G + + ++
Sbjct: 37 GKTVIITGATTGIGKETAVDLAKRGARVIIGARNLDRGNAAVRDIQASSGSQQVFVEHLD 96
Query: 177 -ADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKQGSLLEGNLLEAYDTVMATNLRAVI 353
A LS+ + + +++K + ++DIL+NNAG+ + + ++ + N +
Sbjct: 97 LASLSSVRKFAEVINKKEE---RVDILMNNAGV---AWIPFKRTEDGFEMMFGVNHLSHF 150
Query: 354 QLTNLATPHIV-EANGNIINISS 419
LTNL + A IIN+SS
Sbjct: 151 LLTNLLLDKLKRSAPSRIINVSS 173
>SB_5208| Best HMM Match : adh_short (HMM E-Value=1.1e-05)
Length = 233
Score = 35.1 bits (77), Expect = 0.029
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +3
Query: 252 LVNNAGMIKQGSLLEGNLLEAYDTVMATNLRAVIQLTNLATPHIVEANGNIINISSTVAT 431
LVNNAG+++ G L+ L++ NL +I +T P + +A G ++N+ S+
Sbjct: 123 LVNNAGILQVGP-LDWQSLDSIKQTADVNLWGLIDVTKTFLPLLKKAKGRVVNMGSSCGA 181
Query: 432 Q 434
+
Sbjct: 182 E 182
>SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07)
Length = 384
Score = 31.9 bits (69), Expect = 0.27
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 198 EVSTIVSKTIDAFGKIDILVNNAGMIKQGSLLEGNL-LEAYDTVMATNLRAV-IQLTNLA 371
+V+ ++ T+ ++G+ID LVNN G Q N+ + ++ V+ TNL + T
Sbjct: 101 KVTNLMKSTLSSYGRIDYLVNNGG--GQFLCPVSNMSYKGWNAVIDTNLNGTFLCCTEAY 158
Query: 372 TPHIVEANGNIINI 413
+ E G+I+NI
Sbjct: 159 RLWMSEHGGSIVNI 172
>SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0)
Length = 1264
Score = 31.5 bits (68), Expect = 0.36
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = +3
Query: 252 LVNNAGMIKQGSLLEGNLLEAYDTVMATNLRAVIQLTNLATPHIVEANGNIINISSTVAT 431
+VNNAG I G + ++ V N+ ++ +T P + ++ G I+N++S
Sbjct: 628 IVNNAG-IGSGGPFDWITVQQMQRVFDVNVWGLLNVTKAFLPLLKKSCGRIVNVASCAGK 686
Query: 432 QNSTALTAY 458
L+AY
Sbjct: 687 LPGPGLSAY 695
>SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 31.1 bits (67), Expect = 0.47
Identities = 20/92 (21%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Frame = +3
Query: 6 RGKVALVXXXXXXXXXXXXXQFTKEGAQVAIVGRNVTKLEKVAGEC--TANGKKPLIIKA 179
+GK ++ A+V + R+V K K A E +A + K
Sbjct: 71 KGKTVIITGANSGIGMEVARDLAWRKARVIMACRDVHKGMKAAAEIVQSAGNMDVEVKKL 130
Query: 180 DLSNQDEVSTIVSKTIDAFGKIDILVNNAGMI 275
DL++ + + + ++D+L+NNAG +
Sbjct: 131 DLASFASIREFAKEVNEEESRVDVLINNAGYL 162
>SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 31.1 bits (67), Expect = 0.47
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +3
Query: 258 NNAGMIKQGSLLEGNLLEAYDTVMATNLRAVIQLTNLATPHIVEANGNIINISSTVATQN 437
NNAG + L E L+ Y + NL ++ ++ P + A G ++N++STV
Sbjct: 469 NNAGYMTLAPL-EWFPLDDYKRMADVNLWGLVDVSKTFLPLVKMARGRVVNVASTVGLIA 527
Query: 438 STALTAYCI 464
+ Y I
Sbjct: 528 NELTAPYSI 536
>SB_58812| Best HMM Match : Paramecium_SA (HMM E-Value=3.4)
Length = 327
Score = 30.3 bits (65), Expect = 0.82
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -2
Query: 433 CVATVLDILIIFPFASTI*GVAKLVNCITARKLVAMTVSYASRRFPSSRLPCFIIPAL 260
C A V+ L PF + V +NC+ ++ AM +SY + PS +I L
Sbjct: 190 CTAMVISYLNCVPFKTCTAMVISYLNCVPSKTCTAMAISYLN-CVPSKTCTAMVISYL 246
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -2
Query: 433 CVATVLDILIIFPFASTI*GVAKLVNCITARKLVAMTVSY 314
C A V L PF + V +NC+ ++ AM +SY
Sbjct: 14 CTAMVKSYLNCVPFKTCTAMVISYLNCVPSKTCTAMVISY 53
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -2
Query: 433 CVATVLDILIIFPFASTI*GVAKLVNCITARKLVAMTVSYASRRFPSSRLPCFIIPAL 260
C A V+ L P + V +NC+ ++ AM +SY + PS +I L
Sbjct: 46 CTAMVISYLNCVPSKTCTAMVKSYLNCVPSKTCTAMVISYLN-CVPSKTCTAMVISYL 102
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -2
Query: 433 CVATVLDILIIFPFASTI*GVAKLVNCITARKLVAMTVSYASRRFPSSRLPCFIIPAL 260
C A V+ L P + V +NC+ ++ AM +SY + PS +I L
Sbjct: 78 CTAMVISYLNCVPSKTCTAMVISYLNCVPSKTCTAMVISYLN-CVPSKTCTAMVISYL 134
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -2
Query: 433 CVATVLDILIIFPFASTI*GVAKLVNCITARKLVAMTVSYASRRFPSSRLPCFIIPAL 260
C A V+ L P + V +NC+ ++ AM +SY + PS +I L
Sbjct: 110 CTAMVISYLNCVPSKTCTAMVISYLNCVPSKTCTAMVISYLN-CVPSKTCTAMVISYL 166
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -2
Query: 433 CVATVLDILIIFPFASTI*GVAKLVNCITARKLVAMTVSYASRRFPSSRLPCFIIPAL 260
C A V+ L P + V +NC+ ++ AM +SY + PS +I L
Sbjct: 142 CTAMVISYLNCVPSKTCTAMVISYLNCVPSKTCTAMVISYLN-CVPSKTCTAMVISYL 198
>SB_30263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 976
Score = 30.3 bits (65), Expect = 0.82
Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = +3
Query: 129 VAGECTANGKKPLIIKADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKQGSLLEGNLL 308
V GE +G P + A L + V + S + +G ++ + N M+K + +G+++
Sbjct: 92 VGGEINVSGHAPPDLNASLDLLETVGNLFSSQL--YGMVNRMAN---MLKCHGVKKGDIV 146
Query: 309 EAYDTVMATNLRAVIQLTNLATPH-IVEANGNIINISSTV-ATQNSTALTA 455
Y V + A++ + PH +V A + ++S + Q T +TA
Sbjct: 147 CLYMPVSPLAVAAMLACARIGAPHSVVFAGFSADALASRINDAQAETVITA 197
>SB_29917| Best HMM Match : Chlorovi_GP_rpt (HMM E-Value=2.6)
Length = 360
Score = 30.3 bits (65), Expect = 0.82
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +3
Query: 333 TNLRAVIQLTNLATPHIVEANGNIIN--ISSTVATQNSTALTA 455
+N++ LTN TP + +G++I +S+TV +NST LTA
Sbjct: 133 SNIKLSGNLTNDMTPDLKTLSGDLIGQLLSATVNEKNSTLLTA 175
>SB_30233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 295 KGTFWKHTTLSWRLICG 345
K FWKH +L+WRL+ G
Sbjct: 449 KPQFWKHPSLAWRLLVG 465
>SB_20705| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 976
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +3
Query: 9 GKVALVXXXXXXXXXXXXXQFTKEGAQVAIVGRNVTKLEKVAGECTA 149
GKV + +FTK G+++ + R +LE+V C A
Sbjct: 870 GKVVWITGASSGIGEHLAYEFTKHGSKLVLSARREKRLEQVKNNCLA 916
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 28.3 bits (60), Expect = 3.3
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +3
Query: 252 LVNNAGMIKQGSLLEGNLLEAYDTVMATNLRAVIQLTNLATPHIVEANGNIINISS 419
L NNAG + +E L Y + NL V+ ++ P + A G ++NISS
Sbjct: 259 LANNAGY-GACAPIEWYPLSHYKRMADVNLWGVVDVSKTFLPLVKMARGRVVNISS 313
>SB_36982| Best HMM Match : adh_short (HMM E-Value=1.4e-05)
Length = 258
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 105 RNVTKLEKVAGECTANGKKPLIIKADLSNQDEVSTIVSKTIDAFG-KIDILVNNAGMIKQ 281
RN T +++ + K I + D N++++ + G K+D+L+N AGM+
Sbjct: 35 RNPTNAKELQDLRSNYPKNMAIFELDAHNEEKIKATADMIKENHGSKLDLLLNCAGMLHP 94
Query: 282 GSLLEGNLLE 311
E +L E
Sbjct: 95 SGKGETSLKE 104
>SB_9398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 RNVTKLEKVAGECTANGKKPLIIKA-DLSNQDEVSTIVSKTIDAFGKIDIL 254
RN+ K + + +C+ L IK D+ + + V +V++ ++ G+ID+L
Sbjct: 71 RNLVKKDALLEKCSGVVGDLLNIKELDVCSDESVKAVVAEIVEKEGRIDVL 121
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,185,460
Number of Sequences: 59808
Number of extensions: 213684
Number of successful extensions: 568
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 957531822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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