Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_N05
(281 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 24 0.36
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 3.3
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 3.3
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 3.3
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 3.3
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 3.3
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 21 3.3
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 20 5.8
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 19 7.7
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 19 7.7
AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve co... 19 7.7
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 23.8 bits (49), Expect = 0.36
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 17 AHPPSSPSLNGSVP 58
A PPS+PS +GS P
Sbjct: 413 ARPPSTPSADGSKP 426
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 20.6 bits (41), Expect = 3.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 280 FFFFFLRLISVLLNQIIIFYFLAPP 206
++FF L + VL++ + + F PP
Sbjct: 213 YYFFNLIVPCVLISSMALLGFTLPP 237
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 20.6 bits (41), Expect = 3.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 280 FFFFFLRLISVLLNQIIIFYFLAPP 206
++FF L + VL++ + + F PP
Sbjct: 213 YYFFNLIVPCVLISSMALLGFTLPP 237
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 20.6 bits (41), Expect = 3.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 280 FFFFFLRLISVLLNQIIIFYFLAPP 206
++FF L + VL++ + + F PP
Sbjct: 213 YYFFNLIVPCVLISSMALLGFTLPP 237
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 20.6 bits (41), Expect = 3.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 280 FFFFFLRLISVLLNQIIIFYFLAPP 206
++FF L + VL++ + + F PP
Sbjct: 213 YYFFNLIVPCVLISSMALLGFTLPP 237
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 20.6 bits (41), Expect = 3.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 280 FFFFFLRLISVLLNQIIIFYFLAPP 206
++FF L + VL++ + + F PP
Sbjct: 213 YYFFNLIVPCVLISSMALLGFTLPP 237
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 20.6 bits (41), Expect = 3.3
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -2
Query: 280 FFFFFLRLISVLLNQIIIFYFLAP 209
F++ F+ LL + I+YF+ P
Sbjct: 116 FYYAFIIFTVHLLFLLCIYYFVVP 139
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 19.8 bits (39), Expect = 5.8
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 5 EGLRAHPPSSPSLNGSVP 58
+G + HP + NG+VP
Sbjct: 148 DGCQKHPLCNDDPNGNVP 165
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 19.4 bits (38), Expect = 7.7
Identities = 10/29 (34%), Positives = 12/29 (41%)
Frame = -3
Query: 87 TAQAWRRNKLGTDPFRLGLEGGCARSPSC 1
TA N+ + FRL EG C C
Sbjct: 29 TADELCENRPADEYFRLTTEGDCRDVVRC 57
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 19.4 bits (38), Expect = 7.7
Identities = 10/29 (34%), Positives = 12/29 (41%)
Frame = -3
Query: 87 TAQAWRRNKLGTDPFRLGLEGGCARSPSC 1
TA N+ + FRL EG C C
Sbjct: 29 TADELCENRPADEYFRLTTEGDCRDVVRC 57
>AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve cord
defective protein protein.
Length = 168
Score = 19.4 bits (38), Expect = 7.7
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +3
Query: 189 GKPCCQGG 212
GKPC GG
Sbjct: 128 GKPCLSGG 135
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,216
Number of Sequences: 336
Number of extensions: 1106
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used: 4790565
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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