BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_N05
(281 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0524 - 25181432-25181483,25181565-25181691,25181776-251818... 31 0.14
06_03_0608 + 22705321-22705652,22705809-22706178,22706264-227066... 29 0.42
07_03_0433 - 18169930-18170029,18171183-18171307,18172192-181723... 29 0.55
01_05_0687 + 24288648-24292746,24293737-24293844,24294333-242944... 29 0.55
06_01_0746 + 5580755-5582119 29 0.73
05_03_0002 - 7278527-7279675,7279768-7280325,7280433-7280594 29 0.73
02_05_1210 - 34954006-34955412 29 0.73
03_06_0772 - 36162537-36162745,36163131-36163171,36163316-361636... 28 1.3
05_01_0413 - 3253345-3253461,3253595-3253666,3253763-3253876,325... 27 1.7
03_06_0106 - 31682200-31682775 27 1.7
10_08_0035 - 14321699-14321751,14321800-14321914,14322136-143221... 27 2.2
04_04_0500 - 25677767-25680850 27 3.0
03_06_0758 - 36052261-36052301,36052463-36052697,36052895-360529... 27 3.0
06_01_0160 - 1205454-1205482,1205647-1205732,1205903-1205956,120... 26 3.9
04_04_0318 + 24347364-24348826,24348920-24349048,24349158-243492... 26 3.9
03_05_0375 + 23594977-23595045,23595471-23595926 26 3.9
02_01_0468 + 3357043-3357226,3357695-3358155 26 3.9
01_06_1471 - 37588330-37588599 26 3.9
01_06_0061 - 26071984-26072343,26072792-26073139,26073228-260733... 26 3.9
08_02_1004 - 23461798-23462024,23462340-23462415,23463479-234636... 26 5.2
06_03_0678 + 23459752-23460379,23460993-23461068,23461146-234612... 26 5.2
03_05_0125 - 21039767-21039791,21039876-21039922,21040220-210405... 26 5.2
01_05_0772 + 25056973-25057285,25057678-25058006,25058113-250583... 26 5.2
01_01_0595 - 4430738-4430785,4430904-4432679 26 5.2
09_06_0020 - 20267190-20267612,20269086-20269495,20269573-202697... 25 6.8
07_01_0377 + 2823602-2823880,2824372-2824569,2824611-2824709 25 6.8
03_06_0728 + 35768830-35769324,35769404-35769462,35770440-357705... 25 6.8
01_07_0160 - 41563109-41563468,41563566-41563985,41564082-415642... 25 6.8
01_03_0153 + 13255667-13255954,13258383-13258529,13258798-132589... 25 6.8
06_01_0849 - 6469308-6469838,6469859-6470320 25 9.0
04_04_1023 + 30201374-30201487,30201601-30202285,30202402-302025... 25 9.0
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 25 9.0
03_02_0187 - 6248226-6249226,6249296-6250148 25 9.0
03_01_0016 + 131141-131236,131743-132043,132125-132341,132440-13... 25 9.0
>03_05_0524 -
25181432-25181483,25181565-25181691,25181776-25181826,
25182159-25182314,25182405-25182905,25182999-25183713,
25183797-25183867,25183974-25184103,25185706-25186167
Length = 754
Score = 31.1 bits (67), Expect = 0.14
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +1
Query: 1 ARGAARAPALKP*PERIGTQLIPPPCLRRAT---HVKARAAEERLPAGPIAPVAPTVPV 168
A G PAL P P + ++PPP L AT + A E P I P+ P+ PV
Sbjct: 337 AGGCEEVPALSPSPPPLHGSVMPPP-LPPATVEPVISAPMVEPPPPPAMITPLPPSTPV 394
>06_03_0608 +
22705321-22705652,22705809-22706178,22706264-22706656,
22707183-22707204,22707257-22707928,22708019-22708494
Length = 754
Score = 29.5 bits (63), Expect = 0.42
Identities = 26/71 (36%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Frame = +1
Query: 1 ARGAARAPALK-P*PERIGTQLIPPPCLRRATHVKARAAEERLPAGP----IAPVAPTVP 165
A GAAR A + P PE PPC R + A RLP A + P P
Sbjct: 24 ASGAARGAAARLPLPE--------PPCTRLLLPEQPWGAAARLPLSEPSWGTAALPPEPP 75
Query: 166 VGMGNHPEASH 198
G HP ASH
Sbjct: 76 WGAAAHPPASH 86
>07_03_0433 -
18169930-18170029,18171183-18171307,18172192-18172358,
18173027-18173081,18173409-18173491,18173493-18173622,
18174482-18174691
Length = 289
Score = 29.1 bits (62), Expect = 0.55
Identities = 18/48 (37%), Positives = 20/48 (41%)
Frame = +1
Query: 46 RIGTQLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPVGMGNHPE 189
R+GT PPC + A AA R GP A A T G PE
Sbjct: 26 RVGTPAPQPPCRGFSKASAAAAASSR---GPAAAAATTTATAAGARPE 70
>01_05_0687 +
24288648-24292746,24293737-24293844,24294333-24294442,
24295208-24295282
Length = 1463
Score = 29.1 bits (62), Expect = 0.55
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Frame = +1
Query: 19 APALKP*PERIGTQLIPPPCLRRATHVKARAAEERLP-------AGPIAPVA--PTVPVG 171
AP +P P+ IPPP +AT RA E + P AGP AP + P++ +G
Sbjct: 40 APPPEPSPQPHHATPIPPPSPGQATEGWPRAEEPQPPIGGTPGAAGPPAPPSFFPSLELG 99
Query: 172 MGNHPEASHAA 204
P A AA
Sbjct: 100 TSAAPPALEAA 110
>06_01_0746 + 5580755-5582119
Length = 454
Score = 28.7 bits (61), Expect = 0.73
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +1
Query: 52 GTQLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPVGMG 177
G L P +RR H +ARA L A APV V G+G
Sbjct: 40 GRGLAMPEIVRRMAH-RARARRRLLSAAEAAPVRARVRAGLG 80
>05_03_0002 - 7278527-7279675,7279768-7280325,7280433-7280594
Length = 622
Score = 28.7 bits (61), Expect = 0.73
Identities = 21/54 (38%), Positives = 25/54 (46%)
Frame = +1
Query: 16 RAPALKP*PERIGTQLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPVGMG 177
RAP+L P R G ++PP L + LPA P APT PVG G
Sbjct: 54 RAPSLVRVPRRGGEAVVPP--LESPGFRSVQPVSVSLPASPSGFGAPT-PVGGG 104
>02_05_1210 - 34954006-34955412
Length = 468
Score = 28.7 bits (61), Expect = 0.73
Identities = 20/44 (45%), Positives = 22/44 (50%)
Frame = +1
Query: 1 ARGAARAPALKP*PERIGTQLIPPPCLRRATHVKARAAEERLPA 132
A GAA+ P KP P+R IPP L T A AA LPA
Sbjct: 15 ATGAAQGPKRKPPPKRFVHTPIPPSILSDPT--LAAAATGLLPA 56
>03_06_0772 -
36162537-36162745,36163131-36163171,36163316-36163600,
36163710-36163813,36163924-36164021,36165039-36165213,
36166429-36166578,36167113-36167193,36167246-36167299,
36167422-36167679
Length = 484
Score = 27.9 bits (59), Expect = 1.3
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = -3
Query: 183 MVSHPHRHSWGHRCNWPRRQPFLRRTCLYMSRT--AQAWRRNKLGTDPFRLGLEGGCARS 10
M S PH+ + + +W R+ R + S + A+ R KL P + LEGGC+
Sbjct: 131 MYSGPHKDAVAY-ADWLRKDHRFRDLLVQTSPSLCGHAFPRLKLRYKPSLVQLEGGCSHL 189
Query: 9 P 7
P
Sbjct: 190 P 190
>05_01_0413 -
3253345-3253461,3253595-3253666,3253763-3253876,
3254050-3254163,3254420-3254520,3254616-3254694,
3254789-3254863,3254955-3255017,3255281-3255361,
3255449-3255574,3255898-3256022,3256722-3256839,
3257420-3257554,3258029-3258175,3259016-3259321
Length = 590
Score = 27.5 bits (58), Expect = 1.7
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 79 LRRATHVKARAAEERLPAGPIAPVAPTVPVG--MGNHPEASHAAKEALKSRI 228
+RRA V ARAA E AG V +G +G H A HA +E LK+ I
Sbjct: 58 VRRAA-VAARAAAENGVAGSGGFDYDLVIIGAGVGGHGAALHAVEEGLKTAI 108
>03_06_0106 - 31682200-31682775
Length = 191
Score = 27.5 bits (58), Expect = 1.7
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -3
Query: 153 GHRCNWPRRQPFLRRTCLYMSRTAQAWRRNKLGTDP--FRLGLEGGCA 16
GHR + R +P R + ++ RR++LG P + G GGCA
Sbjct: 50 GHRLHCLRPRPLPSRIVPTEAMEGRSKRRHRLGKPPPDLQAGAVGGCA 97
>10_08_0035 -
14321699-14321751,14321800-14321914,14322136-14322199,
14322221-14322238,14323433-14323524,14323580-14323601,
14324345-14324424,14324882-14325082
Length = 214
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 101 RHVRRRNGCLRGQLHLWPQLCLWGWETIRRQAMLPRRR*K 220
R RRR+ + GQL L P L+ + R ++P RR K
Sbjct: 11 RRRRRRSAAIGGQLLLPPLFWLFPLSPLSRPMVMPARRGK 50
>04_04_0500 - 25677767-25680850
Length = 1027
Score = 26.6 bits (56), Expect = 3.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 100 KARAAEERLPAGPIAPVAPTVPVGMGNHPEASHAA 204
K RA + P P +AP +G+HP+AS A
Sbjct: 12 KPRANQPPPPPPPPFRLAPAAVAALGSHPDASSYA 46
>03_06_0758 -
36052261-36052301,36052463-36052697,36052895-36052966,
36056477-36056567,36056650-36056872,36056964-36057300,
36057406-36057588
Length = 393
Score = 26.6 bits (56), Expect = 3.0
Identities = 21/63 (33%), Positives = 25/63 (39%)
Frame = +1
Query: 4 RGAARAPALKP*PERIGTQLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPVGMGNH 183
RGA P P P + PP LR A A P++PV+P VG
Sbjct: 137 RGATAPPPPPPPPMAVAPPPFLPPPLRPFA---APLLFHHDMASPVSPVSPIYYVGPPPP 193
Query: 184 PEA 192
PEA
Sbjct: 194 PEA 196
>06_01_0160 -
1205454-1205482,1205647-1205732,1205903-1205956,
1206035-1206130,1207332-1207448,1207834-1207952
Length = 166
Score = 26.2 bits (55), Expect = 3.9
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Frame = -3
Query: 171 PHRHSWGHRCNWPRRQPFLRRT-CL 100
PH H W R WP LRR CL
Sbjct: 74 PHLHRWYSRLRWPLLAGRLRRVGCL 98
>04_04_0318 +
24347364-24348826,24348920-24349048,24349158-24349293,
24349447-24349535,24349631-24349742,24349836-24349942,
24350033-24350129
Length = 710
Score = 26.2 bits (55), Expect = 3.9
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +1
Query: 61 LIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPVGMGNHPEA 192
L PPP L H+ R A E+ P VA P + H E+
Sbjct: 172 LPPPPPLPPQDHIPERLAVEKSPMDVEPAVASESPEQLQEHAES 215
>03_05_0375 + 23594977-23595045,23595471-23595926
Length = 174
Score = 26.2 bits (55), Expect = 3.9
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -3
Query: 171 PHRHSWGHRC-NWPRRQPFLRRTCLYMSRTAQAWRRN 64
P HSW NWPR +PF R + + A W N
Sbjct: 11 PSSHSWHVGFWNWPRCRPFHRSSVVDGCGVAGPWDDN 47
>02_01_0468 + 3357043-3357226,3357695-3358155
Length = 214
Score = 26.2 bits (55), Expect = 3.9
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 127 PAGPIAPVAPTVPVGMGNHPEASHAAKEALKS 222
PAG P AP P G + P AA KS
Sbjct: 157 PAGQAPPGAPATPAGTNSSPANGGAAGGGAKS 188
>01_06_1471 - 37588330-37588599
Length = 89
Score = 26.2 bits (55), Expect = 3.9
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +1
Query: 61 LIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPVGMGNHPEASHAA 204
L P PC+R H + GP AP P+ P G G+ A A+
Sbjct: 14 LPPSPCIR---HQRRGGMGAAATTGPAAPPLPSFPGGDGSARAADLAS 58
>01_06_0061 -
26071984-26072343,26072792-26073139,26073228-26073371,
26073454-26073723,26075019-26075825
Length = 642
Score = 26.2 bits (55), Expect = 3.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 64 IPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPV 168
+PP R +AR+A LP+ P APV+ P+
Sbjct: 14 LPPRAGLRLPLPRARSARVSLPSSPAAPVSLQSPL 48
>08_02_1004 -
23461798-23462024,23462340-23462415,23463479-23463610,
23463927-23464004,23464919-23465320
Length = 304
Score = 25.8 bits (54), Expect = 5.2
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +1
Query: 55 TQLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPVGMGNHPEAS 195
T L+PPP A+ PAGP A VA + G+HP A+
Sbjct: 18 TSLLPPP---------PGASASLAPAGPAAAVARQIRRNDGHHPGAA 55
>06_03_0678 +
23459752-23460379,23460993-23461068,23461146-23461261,
23462425-23462939
Length = 444
Score = 25.8 bits (54), Expect = 5.2
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = +2
Query: 143 HLWPQLCLWGWETIRRQAML 202
H + + C+WGW+ + R ++
Sbjct: 282 HQFIEYCIWGWDNLPRTVLM 301
>03_05_0125 -
21039767-21039791,21039876-21039922,21040220-21040533,
21040613-21040735,21041599-21041710
Length = 206
Score = 25.8 bits (54), Expect = 5.2
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 100 KARAAEERLPAGPIAPVAPTVPVGMGNHPE 189
K +ERL GP P AP VP P+
Sbjct: 173 KIARRDERLAQGPREPAAPAVPAQTAAAPK 202
>01_05_0772 +
25056973-25057285,25057678-25058006,25058113-25058360,
25058481-25059396
Length = 601
Score = 25.8 bits (54), Expect = 5.2
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 280 FFFFFLRLISVLLNQIIIFYFLAPPWQH 197
F+F + SVLL ++ + P WQH
Sbjct: 370 FYFAGMETTSVLLTWTLVVLSMHPEWQH 397
>01_01_0595 - 4430738-4430785,4430904-4432679
Length = 607
Score = 25.8 bits (54), Expect = 5.2
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = +1
Query: 13 ARAPALKP*PERIGTQ-LIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVP 165
A P P PE+ IP P +R + A AA + P P + T+P
Sbjct: 155 APQPPPAPAPEKAAVSPSIPVPAKKRVSATAAAAATDASPRVPFKDLVNTLP 206
>09_06_0020 -
20267190-20267612,20269086-20269495,20269573-20269747,
20270833-20271066,20271164-20271265,20271354-20272091,
20272204-20272321,20272417-20272667,20272768-20272932
Length = 871
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 124 LPAGPIAPVAPTVPVGMGNHPEASHAA 204
L GP+ A +P G+G A HAA
Sbjct: 308 LTGGPVGSAAMRLPAGIGGLDGAMHAA 334
>07_01_0377 + 2823602-2823880,2824372-2824569,2824611-2824709
Length = 191
Score = 25.4 bits (53), Expect = 6.8
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +1
Query: 43 ERIGTQLIPPPCLRRAT 93
+R+GT+L+PP L+RA+
Sbjct: 66 KRVGTRLLPPDPLKRAS 82
>03_06_0728 +
35768830-35769324,35769404-35769462,35770440-35770509,
35770626-35770748,35770836-35770964,35771268-35771717
Length = 441
Score = 25.4 bits (53), Expect = 6.8
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 142 APVAPTVPVGMGNHPEASHAAKEALKSR 225
AP APT G HPE A+ + KSR
Sbjct: 36 APPAPTAAAPRGKHPE-PEVAEPSAKSR 62
>01_07_0160 -
41563109-41563468,41563566-41563985,41564082-41564263,
41564362-41564542,41565066-41565084,41565185-41565445,
41566140-41566253,41566264-41566331,41566890-41567018,
41567141-41567245,41567317-41567456,41567519-41567687,
41567824-41567900,41568133-41568187,41568660-41568705,
41568806-41568894,41568996-41569061,41569360-41569425,
41569817-41569906,41570009-41570026
Length = 884
Score = 25.4 bits (53), Expect = 6.8
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 50 SVPSLFLRHACAVRLM*RHVRRRNGCLRGQLHLWPQLCLWGW 175
S+ +L L ACA+ + R R +RG HL + GW
Sbjct: 778 SIATLGLLIACALPVFFRVTTARRSFVRGPFHLGKYGVIVGW 819
>01_03_0153 +
13255667-13255954,13258383-13258529,13258798-13258932,
13259344-13259461,13260925-13261049,13261407-13261532,
13261617-13261697,13262188-13262250,13262328-13262402,
13263439-13263517,13263627-13263727,13263952-13264065,
13264225-13264338,13264406-13264477,13264561-13264608
Length = 561
Score = 25.4 bits (53), Expect = 6.8
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +1
Query: 43 ERIGTQLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPVG--MGNHPEASHAAKEAL 216
E +G + + P AT KA AA AG V +G +G H A HA ++ L
Sbjct: 39 EALGLRSLRAPPRAAATPRKAAAATGNGAAGSGGFDYDLVIIGAGVGGHGAALHAVEKGL 98
Query: 217 KSRI 228
K+ I
Sbjct: 99 KTAI 102
>06_01_0849 - 6469308-6469838,6469859-6470320
Length = 330
Score = 25.0 bits (52), Expect = 9.0
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +1
Query: 55 TQLIPPPCLRRATHVKARAA--EERLPAGPIAPVA 153
++L+ PPCL ATH + + RL +G P A
Sbjct: 10 SRLLQPPCLTAATHANSLLSLHLRRLLSGAAEPFA 44
>04_04_1023 +
30201374-30201487,30201601-30202285,30202402-30202506,
30202561-30203939
Length = 760
Score = 25.0 bits (52), Expect = 9.0
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 10 AARAPALKP*PERIGTQLIPPPCLRR-ATHVKARAAEERLPAG 135
A AP + P+ T+ P P RR A A +AEE++P G
Sbjct: 186 APPAPTTRRRPQT-STEAAPAPTTRRRAQSTVAASAEEKVPRG 227
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 25.0 bits (52), Expect = 9.0
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +1
Query: 34 P*PERIGTQLIPPPCLRR-ATHVKARAAEERLPAGPIAPVAPTVPVGMG 177
P P +PPP + A V A PA PIA AP P+ G
Sbjct: 625 PPPMMANAAPVPPPSMANGAGPVPPPIAVAPPPAPPIAGAAPPPPMANG 673
>03_02_0187 - 6248226-6249226,6249296-6250148
Length = 617
Score = 25.0 bits (52), Expect = 9.0
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 64 IPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPV-GMGNHPEASHA 201
+PPP L + V + P+ AP++P+ V + +HP A
Sbjct: 37 LPPPLLAQKVQVWPKPTSISWPSAVYAPLSPSFSVRAVLSHPSLRQA 83
>03_01_0016 +
131141-131236,131743-132043,132125-132341,132440-132773,
132883-132996,133065-133193,133293-133469,133555-133746,
134844-134981,135327-135559,135900-136003,136633-136727,
136817-137053,137801-137922,138252-138354,138750-138826,
138909-139017,139107-139253,139953-140000,140292-140492,
140589-140738,140917-141002,141088-141193,141278-141373,
141759-141911,142647-142819,142923-142986,144056-144193,
144548-144595,144690-144836,144907-144968,146540-146645,
147357-147461,147548-147679,147765-147974,148070-148171,
148261-148398
Length = 1729
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 225 STF*RLLGSMACLRMVSHPHRHSWGHR 145
S+F L + ++HPH HS HR
Sbjct: 804 SSFFALAADFHDMTSITHPHHHSPSHR 830
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,873,167
Number of Sequences: 37544
Number of extensions: 159140
Number of successful extensions: 738
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 279801164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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