Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_N05
(281 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical ... 33 0.024
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 0.90
Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical pr... 28 0.90
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 27 1.6
U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr... 27 2.1
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 27 2.1
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 26 3.6
U82936-1|AAB40869.1| 682|Caenorhabditis elegans protein kinase ... 26 3.6
U82935-1|AAB40868.1| 680|Caenorhabditis elegans protein kinase ... 26 3.6
U42436-3|AAL02471.1| 498|Caenorhabditis elegans Hypothetical pr... 26 3.6
U42436-2|AAL02470.2| 552|Caenorhabditis elegans Hypothetical pr... 26 3.6
U29376-5|AAA68709.2| 936|Caenorhabditis elegans Protein kinase ... 26 3.6
U29376-4|AAM51504.1| 682|Caenorhabditis elegans Protein kinase ... 26 3.6
U29376-3|AAM51503.1| 680|Caenorhabditis elegans Protein kinase ... 26 3.6
AC024763-6|AAO12403.1| 603|Caenorhabditis elegans Calpain famil... 25 6.3
AC024763-5|AAO12402.1| 716|Caenorhabditis elegans Calpain famil... 25 6.3
Z68114-3|CAA92153.1| 149|Caenorhabditis elegans Hypothetical pr... 25 8.4
AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ... 25 8.4
>AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical
protein Y47D3B.6 protein.
Length = 269
Score = 33.5 bits (73), Expect = 0.024
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 49 IGTQLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPVGMG 177
+G L PP ++ T AR +P P+ PVAP +PV +G
Sbjct: 181 VGVCLCPPELIQEGTVCVARTIYGVVPP-PVIPVAPVIPVALG 222
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 28.3 bits (60), Expect = 0.90
Identities = 16/56 (28%), Positives = 21/56 (37%)
Frame = +1
Query: 49 IGTQLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPVGMGNHPEASHAAKEAL 216
I T P P + A E A P +P + HP A+HAAK +
Sbjct: 1523 IVTPQAPQPTAAATSASTGPIAPEPTTAAPTTTETTPLPPSLAPHPPAAHAAKTVI 1578
>Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical
protein C36A4.5 protein.
Length = 954
Score = 28.3 bits (60), Expect = 0.90
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +1
Query: 1 ARGAARAPALKP*PERIGTQLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPVGMGN 180
A A++AP P P + PP A KA A ++ AG + AP+ P +
Sbjct: 382 AASASKAPIRAPIPAKSAPA---PPRGAPAKAAKAEAIAQKKVAGKVQRAAPSKPASAVS 438
Query: 181 HPEASHAA 204
P+A+ A
Sbjct: 439 APKATAPA 446
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 27.5 bits (58), Expect = 1.6
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +1
Query: 40 PERIGTQLIPPPCLRRATHVKARAAEERLPA-GPIAPVAPTVPVGMGNHPEA 192
P + ++PPP V E +PA GP+AP P+ P+ G P A
Sbjct: 135 PPVVTQPIVPPP----VPEVSEPVPEPPIPAPGPVAPPTPSGPLFGGVEPGA 182
>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical
protein F41H10.3b protein.
Length = 1005
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 103 ARAAEERLPAGPIAPVAPTVPV 168
A A+ + P P APVAP VP+
Sbjct: 717 AEASSDPAPPVPAAPVAPVVPI 738
Score = 27.1 bits (57), Expect = 2.1
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 124 LPAGPIAPVAPTVPV 168
+PA P+APV P VP+
Sbjct: 727 VPAAPVAPVVPIVPI 741
>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical
protein F41H10.3a protein.
Length = 1140
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 103 ARAAEERLPAGPIAPVAPTVPV 168
A A+ + P P APVAP VP+
Sbjct: 717 AEASSDPAPPVPAAPVAPVVPI 738
Score = 27.1 bits (57), Expect = 2.1
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 124 LPAGPIAPVAPTVPV 168
+PA P+APV P VP+
Sbjct: 727 VPAAPVAPVVPIVPI 741
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 26.2 bits (55), Expect = 3.6
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = +1
Query: 1 ARGAARAPALKP*PERIGTQLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPVGMGN 180
A A++AP P P R PP A KA ++ AG + AP+ P +
Sbjct: 360 AAPASKAPTRAPIPARSAPA---PPRGAPAKAPKAEPIAQKKVAGKVQRAAPSKPASAVS 416
Query: 181 HPEASHAA 204
P+A+ A
Sbjct: 417 APKATAPA 424
>U82936-1|AAB40869.1| 682|Caenorhabditis elegans protein kinase C2
B isoform protein.
Length = 682
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 127 PAGPIAPVAPTVPVGMGNH 183
P P AP A T+P+G NH
Sbjct: 322 PKDPAAPRASTLPLGSSNH 340
>U82935-1|AAB40868.1| 680|Caenorhabditis elegans protein kinase C2
A isoform protein.
Length = 680
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 127 PAGPIAPVAPTVPVGMGNH 183
P P AP A T+P+G NH
Sbjct: 322 PKDPAAPRASTLPLGSSNH 340
>U42436-3|AAL02471.1| 498|Caenorhabditis elegans Hypothetical
protein C49H3.6b protein.
Length = 498
Score = 26.2 bits (55), Expect = 3.6
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +1
Query: 58 QLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVP-VGMGNHPEASHAAKEALKSRI 228
Q PPP R + RLP P V VP + +G+ P +S + S +
Sbjct: 356 QPAPPPVARLPNSATFPTEKSRLPRAPPPAVTTPVPRMSIGSLPASSSNVPRTMSSPV 413
>U42436-2|AAL02470.2| 552|Caenorhabditis elegans Hypothetical
protein C49H3.6a protein.
Length = 552
Score = 26.2 bits (55), Expect = 3.6
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +1
Query: 58 QLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVP-VGMGNHPEASHAAKEALKSRI 228
Q PPP R + RLP P V VP + +G+ P +S + S +
Sbjct: 356 QPAPPPVARLPNSATFPTEKSRLPRAPPPAVTTPVPRMSIGSLPASSSNVPRTMSSPV 413
>U29376-5|AAA68709.2| 936|Caenorhabditis elegans Protein kinase c
protein 2, isoformc protein.
Length = 936
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 127 PAGPIAPVAPTVPVGMGNH 183
P P AP A T+P+G NH
Sbjct: 462 PKDPAAPRASTLPLGSSNH 480
>U29376-4|AAM51504.1| 682|Caenorhabditis elegans Protein kinase c
protein 2, isoformb protein.
Length = 682
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 127 PAGPIAPVAPTVPVGMGNH 183
P P AP A T+P+G NH
Sbjct: 322 PKDPAAPRASTLPLGSSNH 340
>U29376-3|AAM51503.1| 680|Caenorhabditis elegans Protein kinase c
protein 2, isoforma protein.
Length = 680
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 127 PAGPIAPVAPTVPVGMGNH 183
P P AP A T+P+G NH
Sbjct: 322 PKDPAAPRASTLPLGSSNH 340
>AC024763-6|AAO12403.1| 603|Caenorhabditis elegans Calpain family
protein 4, isoform b protein.
Length = 603
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 109 AAEERLPAGPIAPVAPTVPV 168
A + +PA P APVAP PV
Sbjct: 179 APKPAVPATPKAPVAPVAPV 198
Score = 25.0 bits (52), Expect = 8.4
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 127 PAGPIAPVAPTVP 165
P P+APVAP +P
Sbjct: 188 PKAPVAPVAPVIP 200
>AC024763-5|AAO12402.1| 716|Caenorhabditis elegans Calpain family
protein 4, isoform a protein.
Length = 716
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 109 AAEERLPAGPIAPVAPTVPV 168
A + +PA P APVAP PV
Sbjct: 179 APKPAVPATPKAPVAPVAPV 198
Score = 25.0 bits (52), Expect = 8.4
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 127 PAGPIAPVAPTVP 165
P P+APVAP +P
Sbjct: 188 PKAPVAPVAPVIP 200
>Z68114-3|CAA92153.1| 149|Caenorhabditis elegans Hypothetical
protein F17A2.4 protein.
Length = 149
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 20 HPPSSPSLNGSVPSLFLRHAC 82
HP + SLNG FL+H C
Sbjct: 84 HPQTGFSLNGYCVGPFLKHGC 104
>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
protein Y20F4.4 protein.
Length = 1319
Score = 25.0 bits (52), Expect = 8.4
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 70 PPCLRRATHVKARAAEERLPAGPIAPVAPTVPVGMGNHP 186
P R + ++ A P GP AP A T+P G G+ P
Sbjct: 431 PRWTRSQSRGRSEATRRSPPKGPSAPPAYTLPFG-GSTP 468
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,730,566
Number of Sequences: 27780
Number of extensions: 102845
Number of successful extensions: 386
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 386
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 259761072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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