Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_N02
         (405 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   2.4  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   5.6  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   5.6  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   5.6  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    22   7.4  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    22   9.8  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 61  YV*WCSVH*IVVCPPSCRLV 2
           +V WCS + + +CP  C ++
Sbjct: 728 FVHWCSSNLLRLCPDKCSVI 747


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 17 GWTNYDSMDRAPL 55
          GW  YDS+DR  L
Sbjct: 11 GWYGYDSVDRLEL 23


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = -2

Query: 224 IHNLIQYYLGTHNMNLCTKLHYF-NFIEY*LCVRGFTRVYYI 102
           IH L   Y+GT ++ LC + ++F  F+    C   F    YI
Sbjct: 45  IHGL--KYIGTVSLTLCERAYFFLTFLVVTACSIYFISNVYI 84


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = -2

Query: 224 IHNLIQYYLGTHNMNLCTKLHYF-NFIEY*LCVRGFTRVYYI 102
           IH L   Y+GT ++ LC + ++F  F+    C   F    YI
Sbjct: 45  IHGL--KYIGTVSLTLCERAYFFLTFLVVTACSIYFISNVYI 84


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 113 VYYILNCVITAFLKIFGICLMVLC 42
           +Y + NC    F+  FGI  ++ C
Sbjct: 407 IYLVQNCCQLFFMTNFGINFILYC 430


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 9/29 (31%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = -1

Query: 135 VCPRLY--PCLLYS*LRNNCVFKNLWNMF 55
           +C  LY  P ++ + + N CV + +W +F
Sbjct: 114 MCLHLYLSPDVVQANIHNLCVLRVIWRVF 142


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 383,837
Number of Sequences: 2352
Number of extensions: 7324
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)