Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_N02
         (405 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089353-1|AAL90091.1|  270|Drosophila melanogaster AT17695p pro...    28   5.4  
AE014296-3170|AAN11652.1|  397|Drosophila melanogaster CG14098-P...    28   5.4  
AE014296-3169|AAF49147.2|  397|Drosophila melanogaster CG14098-P...    28   5.4  

>AY089353-1|AAL90091.1|  270|Drosophila melanogaster AT17695p
           protein.
          Length = 270

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 153 LYRVLAVCPRLYPC 112
           LYR + VCPR +PC
Sbjct: 92  LYRFICVCPRYHPC 105


>AE014296-3170|AAN11652.1|  397|Drosophila melanogaster CG14098-PB,
           isoform B protein.
          Length = 397

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 153 LYRVLAVCPRLYPC 112
           LYR + VCPR +PC
Sbjct: 92  LYRFICVCPRYHPC 105


>AE014296-3169|AAF49147.2|  397|Drosophila melanogaster CG14098-PA,
           isoform A protein.
          Length = 397

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 153 LYRVLAVCPRLYPC 112
           LYR + VCPR +PC
Sbjct: 92  LYRFICVCPRYHPC 105


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,603,530
Number of Sequences: 53049
Number of extensions: 254004
Number of successful extensions: 335
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 335
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1191504915
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)