Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_N01
(496 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002196-9|AAV34797.1| 475|Caenorhabditis elegans Hypothetical ... 110 6e-25
AF002196-8|AAB53976.2| 586|Caenorhabditis elegans Hypothetical ... 110 6e-25
CU457741-8|CAM36349.1| 544|Caenorhabditis elegans Hypothetical ... 37 0.007
Z92825-7|CAB07317.1| 487|Caenorhabditis elegans Hypothetical pr... 36 0.021
Z81041-15|CAB02792.1| 487|Caenorhabditis elegans Hypothetical p... 36 0.021
U23516-2|AAG38882.1| 507|Caenorhabditis elegans Hypothetical pr... 36 0.021
U23516-1|AAL11101.1| 464|Caenorhabditis elegans Hypothetical pr... 36 0.021
Z70203-1|CAA94104.1| 456|Caenorhabditis elegans Hypothetical pr... 35 0.028
Z92825-4|CAB07312.1| 467|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical p... 29 1.9
Z70683-6|CAA94591.2| 512|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 28 4.3
Z73969-21|CAI46568.2| 272|Caenorhabditis elegans Hypothetical p... 27 9.9
Z70783-12|CAI46596.2| 272|Caenorhabditis elegans Hypothetical p... 27 9.9
>AF002196-9|AAV34797.1| 475|Caenorhabditis elegans Hypothetical
protein C09D4.1b protein.
Length = 475
Score = 110 bits (264), Expect = 6e-25
Identities = 49/96 (51%), Positives = 71/96 (73%)
Frame = +1
Query: 7 VVYLSSILLGFFMTGYLPVGFEFASEVTYPEPEGTTSGILNAVVQLFGVLTTLLYERMLG 186
+V++++ LLGFFMTGYLP+GFEFA+E+TYP EGTTSG+LNA Q+FG+ T L ++
Sbjct: 357 LVFINAALLGFFMTGYLPIGFEFAAEITYPAAEGTTSGLLNASAQIFGIALTWLMGIVMH 416
Query: 187 TVGDRWSNVTLCAILVLGTVITAAIKSDLRRQAAQN 294
G SN+ + + LV+GT++T I+ DL+RQ A +
Sbjct: 417 GFGTFTSNIIMSSCLVVGTILTCFIREDLKRQKAHS 452
>AF002196-8|AAB53976.2| 586|Caenorhabditis elegans Hypothetical
protein C09D4.1a protein.
Length = 586
Score = 110 bits (264), Expect = 6e-25
Identities = 49/96 (51%), Positives = 71/96 (73%)
Frame = +1
Query: 7 VVYLSSILLGFFMTGYLPVGFEFASEVTYPEPEGTTSGILNAVVQLFGVLTTLLYERMLG 186
+V++++ LLGFFMTGYLP+GFEFA+E+TYP EGTTSG+LNA Q+FG+ T L ++
Sbjct: 468 LVFINAALLGFFMTGYLPIGFEFAAEITYPAAEGTTSGLLNASAQIFGIALTWLMGIVMH 527
Query: 187 TVGDRWSNVTLCAILVLGTVITAAIKSDLRRQAAQN 294
G SN+ + + LV+GT++T I+ DL+RQ A +
Sbjct: 528 GFGTFTSNIIMSSCLVVGTILTCFIREDLKRQKAHS 563
>CU457741-8|CAM36349.1| 544|Caenorhabditis elegans Hypothetical
protein C42C1.8 protein.
Length = 544
Score = 37.1 bits (82), Expect = 0.007
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = +1
Query: 7 VVYLSSILLGFFMTGYLPVGFEFASEVTYPEPEGTTSGILNAVVQLFGVL 156
+++ S GF PVG E A E TYP +SG + V QLF VL
Sbjct: 390 ILFFISGAFGFCGLAAYPVGLELAIECTYPAAPEVSSGFIVLVGQLFSVL 439
>Z92825-7|CAB07317.1| 487|Caenorhabditis elegans Hypothetical
protein C27A7.6 protein.
Length = 487
Score = 35.5 bits (78), Expect = 0.021
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +1
Query: 7 VVYLSSILLGFFMTGYLPVGFEFASEVTYPEPEGTTSGILNAVVQLF 147
+VY LG F P+G E E T+P E T+SG+L LF
Sbjct: 363 IVYTLCGCLGAFSIPQFPIGVELGVETTFPVMEATSSGVLVIFGSLF 409
>Z81041-15|CAB02792.1| 487|Caenorhabditis elegans Hypothetical
protein C27A7.6 protein.
Length = 487
Score = 35.5 bits (78), Expect = 0.021
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +1
Query: 7 VVYLSSILLGFFMTGYLPVGFEFASEVTYPEPEGTTSGILNAVVQLF 147
+VY LG F P+G E E T+P E T+SG+L LF
Sbjct: 363 IVYTLCGCLGAFSIPQFPIGVELGVETTFPVMEATSSGVLVIFGSLF 409
>U23516-2|AAG38882.1| 507|Caenorhabditis elegans Hypothetical
protein B0416.5a protein.
Length = 507
Score = 35.5 bits (78), Expect = 0.021
Identities = 18/82 (21%), Positives = 39/82 (47%)
Frame = +1
Query: 7 VVYLSSILLGFFMTGYLPVGFEFASEVTYPEPEGTTSGILNAVVQLFGVLTTLLYERMLG 186
++ ++ +L G P+G E ASE T+P E T++G++ Q+ V+ + +
Sbjct: 355 ILGVTCLLFGVLGLATYPIGLELASECTFPVSEATSTGLIVLSGQIQSVIYVFIMKNFAR 414
Query: 187 TVGDRWSNVTLCAILVLGTVIT 252
+ ++ +C + T+ T
Sbjct: 415 PLQPDRMHIQVCQLTPDDTINT 436
>U23516-1|AAL11101.1| 464|Caenorhabditis elegans Hypothetical
protein B0416.5b protein.
Length = 464
Score = 35.5 bits (78), Expect = 0.021
Identities = 18/82 (21%), Positives = 39/82 (47%)
Frame = +1
Query: 7 VVYLSSILLGFFMTGYLPVGFEFASEVTYPEPEGTTSGILNAVVQLFGVLTTLLYERMLG 186
++ ++ +L G P+G E ASE T+P E T++G++ Q+ V+ + +
Sbjct: 312 ILGVTCLLFGVLGLATYPIGLELASECTFPVSEATSTGLIVLSGQIQSVIYVFIMKNFAR 371
Query: 187 TVGDRWSNVTLCAILVLGTVIT 252
+ ++ +C + T+ T
Sbjct: 372 PLQPDRMHIQVCQLTPDDTINT 393
>Z70203-1|CAA94104.1| 456|Caenorhabditis elegans Hypothetical
protein C05G5.1 protein.
Length = 456
Score = 35.1 bits (77), Expect = 0.028
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +1
Query: 10 VYLSSILLGFFMTGYLPVGFEFASEVTYPEPEGTTSGILNAVVQLFGVLTTLLYERMLG 186
V LS + G P+G E E T+P E T++G++ + Q+ GV ++ +G
Sbjct: 331 VILSIFIFGAAGFSIYPIGLEMGVEATFPVAEATSTGLIIMIGQVQGVFYVIMTNLAVG 389
>Z92825-4|CAB07312.1| 467|Caenorhabditis elegans Hypothetical
protein C13C4.6 protein.
Length = 467
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 52 YLPVGFEFASEVTYPEPEGTTSGILNAVVQ 141
+ P+G E E TYP E ++G+LN Q
Sbjct: 358 HTPIGNEMGVETTYPVQESISTGVLNTFGQ 387
>Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical
protein Y57G11C.23 protein.
Length = 532
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 13 YLSSILLGFFMTGYLPVGFEFASEVTYP 96
Y+ L+GF + G L VG+ +ASE+ P
Sbjct: 161 YIFRFLVGFAIAGTLTVGWTYASEMVIP 188
>Z70683-6|CAA94591.2| 512|Caenorhabditis elegans Hypothetical
protein F13B12.2 protein.
Length = 512
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +1
Query: 49 GYLPVGFEFASEVTYPEPEGTTSGILNAVVQLFGVLTTLLYERMLGTVGDRWS 207
G PV + +E+ PE + G AV + + TTL Y + TVG WS
Sbjct: 403 GVGPVAYFLPAELVPPEAASASLGAAVAVNWICTITTTLFYYPLSKTVGG-WS 454
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 27.9 bits (59), Expect = 4.3
Identities = 22/84 (26%), Positives = 42/84 (50%)
Frame = -3
Query: 257 AAVMTVPKTSIAQRVTFDQRSPTVPSIRSYRRVVKTPNN*TTAFSIPEVVPSGSGYVTSD 78
+ V+TVP T + + T SPTV + + VV TP +T ++P V + V ++
Sbjct: 340 STVVTVPSTVVTKPNTVVTSSPTVATTPT--TVVTTP---STVVTVPSTVVTVPTTVVTN 394
Query: 77 ANSNPTGK*PVIKNPSSMLLK*TT 6
++ T V+ P++++ +T
Sbjct: 395 PSTVVTAPSTVVTVPTTVMTSRST 418
>Z73969-21|CAI46568.2| 272|Caenorhabditis elegans Hypothetical
protein ZK856.14 protein.
Length = 272
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +1
Query: 145 FGVLTTLLYERMLGTVGDRWSNVTLCAILVLGTVIT 252
FG++ L+ ++GT+G +S++ C I+ + T+++
Sbjct: 55 FGLICPLVDFIIVGTIGTFFSSIKSCFIVYIPTIVS 90
>Z70783-12|CAI46596.2| 272|Caenorhabditis elegans Hypothetical
protein ZK856.14 protein.
Length = 272
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +1
Query: 145 FGVLTTLLYERMLGTVGDRWSNVTLCAILVLGTVIT 252
FG++ L+ ++GT+G +S++ C I+ + T+++
Sbjct: 55 FGLICPLVDFIIVGTIGTFFSSIKSCFIVYIPTIVS 90
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,804,834
Number of Sequences: 27780
Number of extensions: 251909
Number of successful extensions: 522
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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