Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_N01
         (496 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   1.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   3.1  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   5.4  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   9.5  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   9.5  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 344 GSFFL*RYKLLL*VYPLFCAA*RL 273
           GSF++  + ++   Y +FCAA R+
Sbjct: 209 GSFYIPLFVMIQVYYKIFCAARRI 232


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 111 DFGDTECRC 137
           D+G TECRC
Sbjct: 290 DYGFTECRC 298


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = +3

Query: 240 DGHHCRYQVRSKTSSGTEQWVNLQ*QLIPLKKKRAS*VLLP 362
           DG    Y +++ +  G ++W  L  +L+    +RA  ++ P
Sbjct: 485 DGQFGNYIIKNNSVGGKKEWTGLIGELV---NERADMIVAP 522


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 121 ILNAVVQLFGVLTTLLYERMLGTVGDRWSNV 213
           I + ++Q F       YER +  + +RW  V
Sbjct: 302 IKSYLIQFFANKNQKFYERGIMMLPERWQKV 332


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +1

Query: 121 ILNAVVQLFGVLTTLLYERMLGTVGDRWSNVT 216
           +LNA+  LF  LT       + T+GD +  V+
Sbjct: 448 MLNAMYSLFDTLTERNRVYKVETIGDAYMVVS 479


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,789
Number of Sequences: 438
Number of extensions: 3101
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)