Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_M24
(549 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 55 4e-08
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 55 4e-08
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 43 1e-04
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 43 1e-04
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 42 2e-04
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 42 2e-04
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 33 0.14
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 33 0.14
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 33 0.14
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 33 0.14
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 33 0.14
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 33 0.14
AF016684-12|AAB66204.1| 291|Caenorhabditis elegans Hypothetical... 28 3.9
Z98866-10|CAE54923.1| 1089|Caenorhabditis elegans Hypothetical p... 27 6.7
Z98866-9|CAB11550.4| 1139|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z19153-4|CAA79548.1| 525|Caenorhabditis elegans Hypothetical pr... 27 6.7
L12018-2|AAK68341.1| 525|Caenorhabditis elegans G protein regul... 27 6.7
U70851-2|AAM97996.1| 671|Caenorhabditis elegans Osmotic avoidan... 27 8.9
U70851-1|AAM97997.1| 699|Caenorhabditis elegans Osmotic avoidan... 27 8.9
U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical pr... 27 8.9
D38632-1|BAA07612.1| 672|Caenorhabditis elegans OSM-3 (kinesin ... 27 8.9
AL032631-12|CAA21576.1| 138|Caenorhabditis elegans Hypothetical... 27 8.9
AF149285-1|AAF99084.1| 672|Caenorhabditis elegans Osm-3 protein. 27 8.9
AF101318-7|AAC69345.1| 826|Caenorhabditis elegans Hypothetical ... 27 8.9
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 54.8 bits (126), Expect = 4e-08
Identities = 39/132 (29%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Frame = +1
Query: 145 MKLLKEAYTSGKDKNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDVDYSEATNPYIS 324
+KLL + TS + V SP+ +++ + L GA +R +I + + E + S
Sbjct: 17 IKLLSDL-TSDQLTPCVFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHFS 75
Query: 325 -LSKTFSEMNPDFFTM-ANKIYVGNQYTLDEKFTSSSRQ-YQSEVETIDFSDTKKAADII 495
++K + D T+ AN+++V + + + FT R+ Y +E TIDF +++AA I+
Sbjct: 76 FINKLLNSSVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIM 135
Query: 496 NQWANEKTRGHI 531
NQ+ +E T+G I
Sbjct: 136 NQFISESTKGKI 147
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 54.8 bits (126), Expect = 4e-08
Identities = 39/132 (29%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Frame = +1
Query: 145 MKLLKEAYTSGKDKNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDVDYSEATNPYIS 324
+KLL + TS + V SP+ +++ + L GA +R +I + + E + S
Sbjct: 17 IKLLSDL-TSDQLTPCVFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHFS 75
Query: 325 -LSKTFSEMNPDFFTM-ANKIYVGNQYTLDEKFTSSSRQ-YQSEVETIDFSDTKKAADII 495
++K + D T+ AN+++V + + + FT R+ Y +E TIDF +++AA I+
Sbjct: 76 FINKLLNSSVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIM 135
Query: 496 NQWANEKTRGHI 531
NQ+ +E T+G I
Sbjct: 136 NQFISESTKGKI 147
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 43.2 bits (97), Expect = 1e-04
Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Frame = +1
Query: 184 KNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFL--GDVDYS-EATNPYISLSKTFSEMNP 354
++ V SPL + + + L A +R EI K L G D E IS +E
Sbjct: 32 ESFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGT 91
Query: 355 DFFTMANKIYVGNQYTLDEKFTSSSRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGHI 531
+ +AN I+ +T+ + + + ++ Y + ++F D + +A+ IN + +E T+GHI
Sbjct: 92 EV-NVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHI 150
Query: 532 RSPIS 546
+ I+
Sbjct: 151 KKIIN 155
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 43.2 bits (97), Expect = 1e-04
Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Frame = +1
Query: 184 KNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFL--GDVDYS-EATNPYISLSKTFSEMNP 354
++ V SPL + + + L A +R EI K L G D E IS +E
Sbjct: 32 ESFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGT 91
Query: 355 DFFTMANKIYVGNQYTLDEKFTSSSRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGHI 531
+ +AN I+ +T+ + + + ++ Y + ++F D + +A+ IN + +E T+GHI
Sbjct: 92 EV-NVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHI 150
Query: 532 RSPIS 546
+ I+
Sbjct: 151 KKIIN 155
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 42.3 bits (95), Expect = 2e-04
Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Frame = +1
Query: 181 DKNVVSSPLGVMMLMLLYKSGAGEGSRVEI-DKFLGDVDYSEATNPYISLSKTFSEMNPD 357
++++V SPL + +++ L +G SR +I + L + + +SK
Sbjct: 21 NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80
Query: 358 FFT-MANKIYVGNQYTLDEKFTSSS-RQYQSEVETIDFSDTKKAADIINQWANEKTRGHI 531
+ANK+Y+ +T++ F S++ + Y ++ +++D + T A IN + N T G I
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT-TPAAVQEINSFVNTATNGKI 139
Query: 532 RS 537
++
Sbjct: 140 KN 141
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 42.3 bits (95), Expect = 2e-04
Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Frame = +1
Query: 181 DKNVVSSPLGVMMLMLLYKSGAGEGSRVEI-DKFLGDVDYSEATNPYISLSKTFSEMNPD 357
++++V SPL + +++ L +G SR +I + L + + +SK
Sbjct: 21 NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80
Query: 358 FFT-MANKIYVGNQYTLDEKFTSSS-RQYQSEVETIDFSDTKKAADIINQWANEKTRGHI 531
+ANK+Y+ +T++ F S++ + Y ++ +++D + T A IN + N T G I
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT-TPAAVQEINSFVNTATNGKI 139
Query: 532 RS 537
++
Sbjct: 140 KN 141
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 33.1 bits (72), Expect = 0.14
Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Frame = +1
Query: 184 KNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFL--GDVDYS-EATNPYISLSKTFSEMNP 354
+++ SPL + + + L A +R +I + L G D E IS + +E
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGT 82
Query: 355 DFFTMANKIYVGNQYTLDEKFTSSSRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGHI 531
+ +AN ++ + + + + ++ Y + ++DF + + A+ IN + E T HI
Sbjct: 83 EV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHI 141
Query: 532 RSPI 543
+ I
Sbjct: 142 KKII 145
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 33.1 bits (72), Expect = 0.14
Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Frame = +1
Query: 184 KNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFL--GDVDYS-EATNPYISLSKTFSEMNP 354
+++ SPL + + + L A +R +I + L G D E IS + +E
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGT 82
Query: 355 DFFTMANKIYVGNQYTLDEKFTSSSRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGHI 531
+ +AN ++ + + + + ++ Y + ++DF + + A+ IN + E T HI
Sbjct: 83 EV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHI 141
Query: 532 RSPI 543
+ I
Sbjct: 142 KKII 145
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 33.1 bits (72), Expect = 0.14
Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Frame = +1
Query: 184 KNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFL--GDVDYS-EATNPYISLSKTFSEMNP 354
+++ SPL + + + L A +R +I + L G D E IS + +E
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGT 82
Query: 355 DFFTMANKIYVGNQYTLDEKFTSSSRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGHI 531
+ +AN ++ + + + + ++ Y + ++DF + + A+ IN + E T HI
Sbjct: 83 EV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHI 141
Query: 532 RSPI 543
+ I
Sbjct: 142 KKII 145
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 33.1 bits (72), Expect = 0.14
Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Frame = +1
Query: 184 KNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFL--GDVDYS-EATNPYISLSKTFSEMNP 354
+++ SPL + + + L A +R +I + L G D E IS + +E
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGT 82
Query: 355 DFFTMANKIYVGNQYTLDEKFTSSSRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGHI 531
+ +AN ++ + + + + ++ Y + ++DF + + A+ IN + E T HI
Sbjct: 83 EV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHI 141
Query: 532 RSPI 543
+ I
Sbjct: 142 KKII 145
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 33.1 bits (72), Expect = 0.14
Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Frame = +1
Query: 184 KNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFL--GDVDYS-EATNPYISLSKTFSEMNP 354
+++ SPL + + + L A +R +I + L G D E IS + +E
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGT 82
Query: 355 DFFTMANKIYVGNQYTLDEKFTSSSRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGHI 531
+ +AN ++ + + + + ++ Y + ++DF + + A+ IN + E T HI
Sbjct: 83 EV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHI 141
Query: 532 RSPI 543
+ I
Sbjct: 142 KKII 145
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 33.1 bits (72), Expect = 0.14
Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Frame = +1
Query: 184 KNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFL--GDVDYS-EATNPYISLSKTFSEMNP 354
+++ SPL + + + L A +R +I + L G D E IS + +E
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGT 82
Query: 355 DFFTMANKIYVGNQYTLDEKFTSSSRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGHI 531
+ +AN ++ + + + + ++ Y + ++DF + + A+ IN + E T HI
Sbjct: 83 EV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHI 141
Query: 532 RSPI 543
+ I
Sbjct: 142 KKII 145
>AF016684-12|AAB66204.1| 291|Caenorhabditis elegans Hypothetical
protein F45C12.4 protein.
Length = 291
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 412 KFTSSSRQYQSEVETIDFSDTKKAADIINQWANEKTR 522
KFTS +Q + E + ID T+K AD+ QW + T+
Sbjct: 7 KFTSPRKQVKEEFKLID---TQKIADVRIQWFGKFTK 40
>Z98866-10|CAE54923.1| 1089|Caenorhabditis elegans Hypothetical
protein Y49E10.11b protein.
Length = 1089
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -1
Query: 543 DWRSDMSSGLLISPLINDVSCFFGIAEVNSFNLALVLTGRAREFLIQSILI 391
D S M+S +S ++++C VN FN + + G AR F I +L+
Sbjct: 180 DITSTMTSPEKLSQFESEITCEPPSRHVNEFNGNIEINGVARHFGIDQLLL 230
>Z98866-9|CAB11550.4| 1139|Caenorhabditis elegans Hypothetical
protein Y49E10.11a protein.
Length = 1139
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -1
Query: 543 DWRSDMSSGLLISPLINDVSCFFGIAEVNSFNLALVLTGRAREFLIQSILI 391
D S M+S +S ++++C VN FN + + G AR F I +L+
Sbjct: 180 DITSTMTSPEKLSQFESEITCEPPSRHVNEFNGNIEINGVARHFGIDQLLL 230
>Z19153-4|CAA79548.1| 525|Caenorhabditis elegans Hypothetical
protein C38C10.4 protein.
Length = 525
Score = 27.5 bits (58), Expect = 6.7
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 319 ISLSKTFSEMNPDFFTMANKIYV--GNQYTLDEKFTSSSRQYQSEVETIDFS 468
I+ K F+E N + KI + +LDEK+ S R+YQ E IDF+
Sbjct: 169 IAAVKLFNENNTEGAVSETKIMLIEAKCLSLDEKYEESRRKYQ---ECIDFA 217
>L12018-2|AAK68341.1| 525|Caenorhabditis elegans G protein
regulator protein 1 protein.
Length = 525
Score = 27.5 bits (58), Expect = 6.7
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 319 ISLSKTFSEMNPDFFTMANKIYV--GNQYTLDEKFTSSSRQYQSEVETIDFS 468
I+ K F+E N + KI + +LDEK+ S R+YQ E IDF+
Sbjct: 169 IAAVKLFNENNTEGAVSETKIMLLEAKCLSLDEKYEESRRKYQ---ECIDFA 217
>U70851-2|AAM97996.1| 671|Caenorhabditis elegans Osmotic avoidance
abnormal protein3, isoform a protein.
Length = 671
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 325 LSKTFSE-MNPDFFTMANKIYVGNQYTLDEKFTSSSRQYQSEVETID 462
L+K+ SE + +F +I V N+Y D+K ++S + S+ T D
Sbjct: 594 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 640
>U70851-1|AAM97997.1| 699|Caenorhabditis elegans Osmotic avoidance
abnormal protein3, isoform b protein.
Length = 699
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 325 LSKTFSE-MNPDFFTMANKIYVGNQYTLDEKFTSSSRQYQSEVETID 462
L+K+ SE + +F +I V N+Y D+K ++S + S+ T D
Sbjct: 622 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 668
>U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical
protein C25H3.8 protein.
Length = 2148
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 356 ISLLWPIKSTSEINILWMRNSRALPVSTKARLKLLTSAIPKKQLTS 493
+S L P+ STS +LW +S L + K L T K + S
Sbjct: 118 VSFLMPLNSTSPEILLWQADSMKLKNTFKTLSSLKTEIFDKYSIES 163
>D38632-1|BAA07612.1| 672|Caenorhabditis elegans OSM-3 (kinesin
protein) protein.
Length = 672
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 325 LSKTFSE-MNPDFFTMANKIYVGNQYTLDEKFTSSSRQYQSEVETID 462
L+K+ SE + +F +I V N+Y D+K ++S + S+ T D
Sbjct: 595 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 641
>AL032631-12|CAA21576.1| 138|Caenorhabditis elegans Hypothetical
protein Y106G6H.13 protein.
Length = 138
Score = 27.1 bits (57), Expect = 8.9
Identities = 20/82 (24%), Positives = 32/82 (39%)
Frame = +1
Query: 268 IDKFLGDVDYSEATNPYISLSKTFSEMNPDFFTMANKIYVGNQYTLDEKFTSSSRQYQSE 447
+D L + + Y ++ E NP+ TM + + QY K S S QY
Sbjct: 47 VDSQLAFEQRNHVVSDYCTMKAAELEKNPNQLTMNSSVMDNQQYFAPPK--SESSQYAWN 104
Query: 448 VETIDFSDTKKAADIINQWANE 513
+ S + AA N + N+
Sbjct: 105 TNDVVSSHHQYAAQSPNIYTND 126
>AF149285-1|AAF99084.1| 672|Caenorhabditis elegans Osm-3 protein.
Length = 672
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 325 LSKTFSE-MNPDFFTMANKIYVGNQYTLDEKFTSSSRQYQSEVETID 462
L+K+ SE + +F +I V N+Y D+K ++S + S+ T D
Sbjct: 594 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 640
>AF101318-7|AAC69345.1| 826|Caenorhabditis elegans Hypothetical
protein Y73C8C.3 protein.
Length = 826
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 394 QYTLDEKFTSSSRQYQSEVETIDFSDTKKAADIINQWAN 510
++ L E+F S QY I F D K +I +W N
Sbjct: 337 EFNLFEEFFKSINQYFDSNNGIHFIDLKDVMEIDGRWEN 375
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.131 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,084,207
Number of Sequences: 27780
Number of extensions: 251407
Number of successful extensions: 736
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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