Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_M23
(376 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 93 2e-20
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 69 2e-13
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 67 7e-13
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 64 7e-12
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 63 2e-11
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 54 7e-09
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 43 2e-05
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 33 0.015
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 28 0.55
SPCC16A11.05c |dim1||U4/U6 x U5 tri-snRNP complex subunit Dim1|S... 28 0.55
SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4 |Schizosac... 25 2.9
SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr... 25 3.9
SPAC11D3.09 |||agmatinase |Schizosaccharomyces pombe|chr 1|||Manual 25 3.9
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 25 3.9
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 25 5.1
SPAC9.07c |||GTPase Rbg1 |Schizosaccharomyces pombe|chr 1|||Manual 25 5.1
SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1 |Sc... 24 6.8
SPBC3D6.06c |||ribose-phosphate pyrophosphokinase |Schizosacchar... 24 6.8
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 24 9.0
SPBC19G7.10c |||topoisomerase associated protein |Schizosaccharo... 24 9.0
SPBC119.01 |rpn3|SPBPJ4664.07|19S proteasome regulatory subunit ... 24 9.0
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 92.7 bits (220), Expect = 2e-20
Identities = 41/75 (54%), Positives = 54/75 (72%)
Frame = +3
Query: 48 DKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFV 227
DKLVV+DF ATWCGPCK I PK ++ +N SD+ +KVDVD+ +IAAE ++AMP+F
Sbjct: 18 DKLVVVDFFATWCGPCKAIAPKFEQFSNTYSDA-TFIKVDVDQLSEIAAEAGVHAMPSFF 76
Query: 228 FVKATKKLEEFSGAN 272
K +K+EE GAN
Sbjct: 77 LYKNGEKIEEIVGAN 91
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 69.3 bits (162), Expect = 2e-13
Identities = 33/88 (37%), Positives = 53/88 (60%)
Frame = +3
Query: 12 FDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIA 191
F D TR+S DK+ V+DF A WCGPCK + P L+++ +E + + V+ D+ DIA
Sbjct: 25 FGDYNTRIS--ADKVTVVDFYADWCGPCKYLKPFLEKL-SEQNQKASFIAVNADKFSDIA 81
Query: 192 AEYNINAMPTFVFVKATKKLEEFSGANV 275
+ + A+PT V + ++L+ GA+V
Sbjct: 82 QKNGVYALPTMVLFRKGQELDRIVGADV 109
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 67.3 bits (157), Expect = 7e-13
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = +3
Query: 57 VVIDFMATWCGPCKMIGPKLDEMANEM-SDSIVVLKVDVDECEDIAAEYNINAMPTFVFV 233
+ +D A WCGPCK I P ++A++ S V KV+VDE IA+ + AMPTFVF
Sbjct: 22 LAVDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFF 81
Query: 234 KATKKLEEFSGAN 272
+ K+++ +GAN
Sbjct: 82 ENGKQIDMLTGAN 94
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 64.1 bits (149), Expect = 7e-12
Identities = 26/80 (32%), Positives = 47/80 (58%)
Frame = +3
Query: 33 LSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINA 212
L +++++++F A W PCK + D+ A + ++ V LK++ ++ DIA +++NA
Sbjct: 15 LQNGKEQIILLNFYAPWAAPCKQMNQVFDQFAKDTKNA-VFLKIEAEKFSDIAESFDVNA 73
Query: 213 MPTFVFVKATKKLEEFSGAN 272
+P FV + K L SGAN
Sbjct: 74 VPLFVLIHGAKVLARISGAN 93
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 62.9 bits (146), Expect = 2e-11
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +3
Query: 48 DKLVVIDFMATWCGPCKMIGPKLDEMANEM-SDSIVVLKVDVDECEDIAAEYNINAMPTF 224
DK++++ F A WCG CK + P+ + A+E+ D I +++VD E D+ +EY+I PT
Sbjct: 39 DKVLMVKFYAPWCGHCKALAPEYESAADELEKDGISLVEVDCTEEGDLCSEYSIRGYPTL 98
Query: 225 VFVKATKKLEEFSG 266
K K++ ++SG
Sbjct: 99 NVFKNGKQISQYSG 112
Score = 56.0 bits (129), Expect = 2e-09
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Frame = +3
Query: 9 DFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSD--SIVVLKVDVDECE 182
+FDD+ + E D V+++F A WCG CK + P +++A E SD ++VV K+D E
Sbjct: 364 NFDDIV--MDETKD--VLVEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVAKIDATE-N 418
Query: 183 DIAAEYNINAMPTFVFVKATKKL 251
DI+ +I+ PT +F KA K+
Sbjct: 419 DISV--SISGFPTIMFFKANDKV 439
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 54.0 bits (124), Expect = 7e-09
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +3
Query: 42 AGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSD--SIVVLKVDVDECEDIAAEYNINAM 215
A K +I+F ATWCG CK + P +E+ D +++ K+D D D+A +Y+I
Sbjct: 37 ASKKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGKIDADTHSDVADKYHITGF 96
Query: 216 PTFVF 230
PT ++
Sbjct: 97 PTLIW 101
Score = 41.5 bits (93), Expect = 4e-05
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +3
Query: 51 KLVVIDFMATWCGPCKMIGPKLDEMANEMSD--SIVVLKVDVDECEDIAAEYNINAMPTF 224
K V+++F A WCG CK + P + + + ++ ++K++ D DI + + + PT
Sbjct: 159 KDVLVEFYADWCGYCKRLAPTYETLGKVFKNEPNVEIVKINADVFADIGRLHEVASFPTI 218
Query: 225 VF 230
F
Sbjct: 219 KF 220
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 42.7 bits (96), Expect = 2e-05
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 45 GDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECED--IAAEYNINAMP 218
G LVV F A WCG CK + P ++A+ + + V VD D ++ + ++Y + P
Sbjct: 49 GPSLVV--FYAPWCGYCKKLVPTYQKLASNLHSLLPVTAVDCDADQNRAVCSQYQVQGFP 106
Query: 219 TFVFVKATKKLEEFSGAN 272
T V + K S +
Sbjct: 107 TIKLVYPSSKGSSLSSTD 124
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 33.1 bits (72), Expect = 0.015
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 36 SEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKV---DVDECEDIAAEYNI 206
SE I + CG CK +GP D M + + + +VD +++++ NI
Sbjct: 38 SEVSKGTWFIKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKELSSCANI 97
Query: 207 NAMPTFVFVKATKKLEE 257
A+PT + + +EE
Sbjct: 98 RAVPTLYLYQNGEIVEE 114
Score = 32.3 bits (70), Expect = 0.026
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +3
Query: 63 IDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFVFVK 236
I F ++ C C + MAN M + V ++ + +Y+I PTF+F K
Sbjct: 303 IQFYSSECDDCDDVSTAWYAMANRMRGKLNVAHINCAVSKRACKQYSIQYFPTFLFFK 360
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 27.9 bits (59), Expect = 0.55
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 307 FNFKMVFLSLSTFAPENSSSFLVALTNTK 221
F +K ++ SLS F ENS ++ L TK
Sbjct: 1157 FPYKPIYFSLSDFLKENSDEIILVLILTK 1185
>SPCC16A11.05c |dim1||U4/U6 x U5 tri-snRNP complex subunit
Dim1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 142
Score = 27.9 bits (59), Expect = 0.55
Identities = 21/73 (28%), Positives = 32/73 (43%)
Frame = +3
Query: 33 LSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINA 212
LSE ++LVVI F C L +A ++ + V+ VD+DE D Y +
Sbjct: 19 LSEQ-ERLVVIRFGRDHDEECIKQDEVLYRIAEKVVNMAVIYLVDIDEVPDFNKMYELYD 77
Query: 213 MPTFVFVKATKKL 251
T +F K +
Sbjct: 78 RTTIMFFYRNKHM 90
>SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 446
Score = 25.4 bits (53), Expect = 2.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 290 VLEFVDVRAGELFEFLGRLNKHESRHRVDVIF 195
VLEF++ +L + G+LN++ + V IF
Sbjct: 77 VLEFLESLIQDLTHYFGKLNENTVKDNVSFIF 108
>SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 905
Score = 25.0 bits (52), Expect = 3.9
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 3 TRDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIV 152
T + D + RL EAG + +A CGPC + + D++A+ ++I+
Sbjct: 429 TIERDGITERLEEAGATV-----LANACGPCIGMWKRTDDIASGEPNAIL 473
>SPAC11D3.09 |||agmatinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 25.0 bits (52), Expect = 3.9
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = -3
Query: 137 HFVSHLVEFGPDHLAGSAPSRHEVNHDELVARLRQPGL 24
HF SHL + P G S +NH Q GL
Sbjct: 207 HFDSHLDSWKPKVFGGGKSSVGSINHGTYFYHASQEGL 244
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 25.0 bits (52), Expect = 3.9
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +3
Query: 24 KTRLSEAGDKLVVI---DFMATWCGPCKMIGPKLDEMANEMSDSIVVL 158
K +EAG I D ++ W G + + +L EMA E SI+ +
Sbjct: 180 KAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFI 227
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 24.6 bits (51), Expect = 5.1
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3
Query: 171 DECEDIAAEYNINAMPTFVFVKATKKL 251
D+CE+ AE+ F+F+K ++L
Sbjct: 518 DQCEEFVAEFRQTEEKYFLFLKRLREL 544
>SPAC9.07c |||GTPase Rbg1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 366
Score = 24.6 bits (51), Expect = 5.1
Identities = 8/41 (19%), Positives = 23/41 (56%)
Frame = +3
Query: 90 PCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINA 212
P ++ K + +++++ + +D+DE + +EY +N+
Sbjct: 175 PPNIVFKKKERGGINITNTVPLTHIDLDEIRAVCSEYRVNS 215
>SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 899
Score = 24.2 bits (50), Expect = 6.8
Identities = 12/62 (19%), Positives = 29/62 (46%)
Frame = -3
Query: 296 DGVLEFVDVRAGELFEFLGRLNKHESRHRVDVIFGGDVFAFVNVDLKNNNGVGHFVSHLV 117
DGV + ++ ++ +GR ++ D+I D FA + ++ G+ + + + +
Sbjct: 627 DGVNDAPALKLADIGIAMGRQGTDVAKEAADMILTDDSFATILSAVEEGKGIFNNIKNFI 686
Query: 116 EF 111
F
Sbjct: 687 TF 688
>SPBC3D6.06c |||ribose-phosphate pyrophosphokinase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 341
Score = 24.2 bits (50), Expect = 6.8
Identities = 10/48 (20%), Positives = 25/48 (52%)
Frame = +3
Query: 126 ANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFVFVKATKKLEEFSGA 269
+ +++D ++ L + + C+ +A+ +P F + + + FSGA
Sbjct: 60 SGQVNDHLMELLIMISACKTASAKKVTAVLPVFPYSRQPDQKFSFSGA 107
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 23.8 bits (49), Expect = 9.0
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 103 SGPNSTRWLTKCPTPLLFLRSTLTNAKTSPP 195
S NST + TPL + ST T + +S P
Sbjct: 293 SSANSTTATSASSTPLTSVNSTTTTSASSTP 323
>SPBC19G7.10c |||topoisomerase associated protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 744
Score = 23.8 bits (49), Expect = 9.0
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 12 FDDLKTRLSEAGDKL 56
+DDL +L+EAGD+L
Sbjct: 33 YDDLGNQLNEAGDEL 47
>SPBC119.01 |rpn3|SPBPJ4664.07|19S proteasome regulatory subunit
Rpn3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 497
Score = 23.8 bits (49), Expect = 9.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 272 VRAGELFEFLGRLNKHESRHRVDVIF 195
VR G+L F L+K+E+ R D ++
Sbjct: 330 VRIGDLCAFTDALSKYEAEFRFDGLY 355
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,210,431
Number of Sequences: 5004
Number of extensions: 20460
Number of successful extensions: 101
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 94
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 120195862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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