Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M23
         (376 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      23   0.89 
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              21   6.3  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              21   6.3  

>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 23.4 bits (48), Expect = 0.89
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = -3

Query: 167 VDLKNNNGVGHFVSHLVEFGPDHLAGSAPSRH 72
           +D  +++G+ H         PDH    +PS H
Sbjct: 23  LDNNDSSGIPHSAESSASNSPDHYERFSPSTH 54


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 359 YN*CFISSVHIIAETGLFQ 303
           YN C +   +I+ E+G F+
Sbjct: 62  YNECILKQFNIVDESGNFK 80


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 359 YN*CFISSVHIIAETGLFQ 303
           YN C +   +I+ E+G F+
Sbjct: 62  YNECILKQFNIVDESGNFK 80


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,175
Number of Sequences: 438
Number of extensions: 1356
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9052365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)