Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M22
         (423 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   2.8  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   2.8  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   2.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.5  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 137 DKIREYKQKSSGGKLVDPSPAIQKRVES 220
           DK+ E   +S+    + PSP I K+  S
Sbjct: 158 DKLIEEDSRSNEDTSLHPSPRITKKANS 185


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 137 DKIREYKQKSSGGKLVDPSPAIQKRVES 220
           DK+ E   +S+    + PSP I K+  S
Sbjct: 106 DKLIEEDSRSNEDTSLHPSPRITKKANS 133


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 137 DKIREYKQKSSGGKLVDPSPAIQKRVES 220
           DK+ E   +S+    + PSP I K+  S
Sbjct: 289 DKLIEEDSRSNEDTSLHPSPRITKKANS 316


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 179 VYHQSFSVCTL*FCPRIIAE 120
           +YH SF  C+   C + +AE
Sbjct: 342 LYHISFMACSSAGCSQKVAE 361


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,147
Number of Sequences: 336
Number of extensions: 1218
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9384961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)