Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_M22
(423 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M37104-1|AAA51807.1| 108|Homo sapiens ATPase coupling factor 6 ... 46 5e-05
CR456950-1|CAG33231.1| 108|Homo sapiens ATP5J protein. 46 5e-05
BT007244-1|AAP35908.1| 108|Homo sapiens ATP synthase, H+ transp... 46 5e-05
BC066310-1|AAH66310.1| 108|Homo sapiens ATP synthase, H+ transp... 46 5e-05
BC001178-1|AAH01178.1| 108|Homo sapiens ATP synthase, H+ transp... 46 5e-05
AY544129-1|AAT11160.1| 108|Homo sapiens proliferation-inducing ... 46 5e-05
M73031-1|AAA58630.1| 108|Homo sapiens coupling factor 6 protein. 44 2e-04
AB014555-1|BAA31630.1| 1083|Homo sapiens KIAA0655 protein protein. 29 8.5
AB013384-1|BAA33713.1| 890|Homo sapiens HIP1R protein. 29 8.5
>M37104-1|AAA51807.1| 108|Homo sapiens ATPase coupling factor 6
subunit protein.
Length = 108
Score = 46.0 bits (104), Expect = 5e-05
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Frame = +2
Query: 68 SVIVTRNLAAT----QKAVDPIQQLFLDKIREYKQK--SSGGKLVDPSPAIQKRVESRAG 229
SV + RN+ T K +DPIQ+LF+DKIREYK K +SGG VD S Q+ +E
Sbjct: 18 SVHLRRNIGVTAVAFNKELDPIQKLFVDKIREYKSKRQTSGGP-VDASSEYQQELERELF 76
Query: 230 KARE 241
K ++
Sbjct: 77 KLKQ 80
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 246 FGGAPGVDMTAFPAFKFEEPKLDPIDE 326
FG A DM FP FKFE+PK + I++
Sbjct: 82 FGNA---DMNTFPTFKFEDPKFEVIEK 105
>CR456950-1|CAG33231.1| 108|Homo sapiens ATP5J protein.
Length = 108
Score = 46.0 bits (104), Expect = 5e-05
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Frame = +2
Query: 68 SVIVTRNLAAT----QKAVDPIQQLFLDKIREYKQK--SSGGKLVDPSPAIQKRVESRAG 229
SV + RN+ T K +DPIQ+LF+DKIREYK K +SGG VD S Q+ +E
Sbjct: 18 SVHLRRNIGVTAVAFNKELDPIQKLFVDKIREYKSKRQTSGGP-VDASSEYQQELERELF 76
Query: 230 KARE 241
K ++
Sbjct: 77 KLKQ 80
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 246 FGGAPGVDMTAFPAFKFEEPKLDPIDE 326
FG A DM FP FKFE+PK + I++
Sbjct: 82 FGNA---DMNTFPTFKFEDPKFEVIEK 105
>BT007244-1|AAP35908.1| 108|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit F6
protein.
Length = 108
Score = 46.0 bits (104), Expect = 5e-05
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Frame = +2
Query: 68 SVIVTRNLAAT----QKAVDPIQQLFLDKIREYKQK--SSGGKLVDPSPAIQKRVESRAG 229
SV + RN+ T K +DPIQ+LF+DKIREYK K +SGG VD S Q+ +E
Sbjct: 18 SVHLRRNIGVTAVAFNKELDPIQKLFVDKIREYKSKRQTSGGP-VDASSEYQQELERELF 76
Query: 230 KARE 241
K ++
Sbjct: 77 KLKQ 80
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 246 FGGAPGVDMTAFPAFKFEEPKLDPIDE 326
FG A DM FP FKFE+PK + I++
Sbjct: 82 FGNA---DMNTFPTFKFEDPKFEVIEK 105
>BC066310-1|AAH66310.1| 108|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit F6
protein.
Length = 108
Score = 46.0 bits (104), Expect = 5e-05
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Frame = +2
Query: 68 SVIVTRNLAAT----QKAVDPIQQLFLDKIREYKQK--SSGGKLVDPSPAIQKRVESRAG 229
SV + RN+ T K +DPIQ+LF+DKIREYK K +SGG VD S Q+ +E
Sbjct: 18 SVHLRRNIGVTAVAFNKELDPIQKLFVDKIREYKSKRQTSGGP-VDASSEYQQELERELF 76
Query: 230 KARE 241
K ++
Sbjct: 77 KLKQ 80
>BC001178-1|AAH01178.1| 108|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit F6
protein.
Length = 108
Score = 46.0 bits (104), Expect = 5e-05
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Frame = +2
Query: 68 SVIVTRNLAAT----QKAVDPIQQLFLDKIREYKQK--SSGGKLVDPSPAIQKRVESRAG 229
SV + RN+ T K +DPIQ+LF+DKIREYK K +SGG VD S Q+ +E
Sbjct: 18 SVHLRRNIGVTAVAFNKELDPIQKLFVDKIREYKSKRQTSGGP-VDASSEYQQELERELF 76
Query: 230 KARE 241
K ++
Sbjct: 77 KLKQ 80
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 246 FGGAPGVDMTAFPAFKFEEPKLDPIDE 326
FG A DM FP FKFE+PK + I++
Sbjct: 82 FGNA---DMNTFPTFKFEDPKFEVIEK 105
>AY544129-1|AAT11160.1| 108|Homo sapiens proliferation-inducing
protein 36 protein.
Length = 108
Score = 46.0 bits (104), Expect = 5e-05
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Frame = +2
Query: 68 SVIVTRNLAAT----QKAVDPIQQLFLDKIREYKQK--SSGGKLVDPSPAIQKRVESRAG 229
SV + RN+ T K +DPIQ+LF+DKIREYK K +SGG VD S Q+ +E
Sbjct: 18 SVHLRRNIGVTAVAFNKELDPIQKLFVDKIREYKSKRQTSGGP-VDASSEYQQELERELF 76
Query: 230 KARE 241
K ++
Sbjct: 77 KLKQ 80
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 246 FGGAPGVDMTAFPAFKFEEPKLDPIDE 326
FG A DM FP FKFE+PK + I++
Sbjct: 82 FGNA---DMNTFPTFKFEDPKFEVIEK 105
>M73031-1|AAA58630.1| 108|Homo sapiens coupling factor 6 protein.
Length = 108
Score = 44.0 bits (99), Expect = 2e-04
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Frame = +2
Query: 68 SVIVTRNLAAT----QKAVDPIQQLFLDKIREYKQK--SSGGKLVDPSPAIQKRVESRAG 229
SV + RN+ T K +DPIQ+LF+DKIREYK K +SGG VD S + +E
Sbjct: 18 SVHLRRNIGVTAVAFNKELDPIQKLFVDKIREYKSKRQTSGGP-VDASSEYHQELERELF 76
Query: 230 KARE 241
K ++
Sbjct: 77 KLKQ 80
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 246 FGGAPGVDMTAFPAFKFEEPKLDPIDE 326
FG A DM FP FKFE+PK + I++
Sbjct: 82 FGNA---DMNTFPTFKFEDPKFEVIEK 105
>AB014555-1|BAA31630.1| 1083|Homo sapiens KIAA0655 protein protein.
Length = 1083
Score = 28.7 bits (61), Expect = 8.5
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 29 LTPSLVSLRAMRASVIVTRNLAATQKAVDPIQQLFLDKIREYKQKSSGGKL 181
L P + +R +V + +AAT A++ + D + + + SSG KL
Sbjct: 782 LKPKSLDVRQEELGAVVDKEMAATSAAIEDAVRRIEDMMNQARHASSGVKL 832
>AB013384-1|BAA33713.1| 890|Homo sapiens HIP1R protein.
Length = 890
Score = 28.7 bits (61), Expect = 8.5
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 29 LTPSLVSLRAMRASVIVTRNLAATQKAVDPIQQLFLDKIREYKQKSSGGKL 181
L P + +R +V + +AAT A++ + D + + + SSG KL
Sbjct: 589 LKPKSLDVRQEELGAVVDKEMAATSAAIEDAVRRIEDMMNQARHASSGVKL 639
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,386,488
Number of Sequences: 237096
Number of extensions: 795689
Number of successful extensions: 5384
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5384
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3259265358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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