Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_M22
(423 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X99665-1|CAA67979.1| 106|Drosophila melanogaster mitochondrial ... 66 2e-11
BT001763-1|AAN71518.1| 106|Drosophila melanogaster RH08870p pro... 66 2e-11
AE014297-3317|AAF56127.1| 106|Drosophila melanogaster CG4412-PA... 66 2e-11
BT023609-1|AAY85009.1| 159|Drosophila melanogaster IP06415p pro... 50 1e-06
AE014296-920|AAF47954.1| 147|Drosophila melanogaster CG12027-PA... 50 1e-06
AE014296-910|AAF47948.2| 4390|Drosophila melanogaster CG17150-PA... 28 5.9
>X99665-1|CAA67979.1| 106|Drosophila melanogaster mitochondrial
ATPase couplingfactor 6 subunit protein.
Length = 106
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/68 (51%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Frame = +2
Query: 26 MLTPSLVS-LRAMRASVIVTRNLAAT--QKAVDPIQQLFLDKIREYKQKSSGGKLVDPSP 196
ML+ SL+S +R +R + A KA DPIQQLFLDK+REYKQKS+GGKLVD +P
Sbjct: 1 MLSQSLLSGMRVLRTEARRNFGIVAPALNKASDPIQQLFLDKVREYKQKSAGGKLVDSNP 60
Query: 197 AIQKRVES 220
I++ +++
Sbjct: 61 DIERELKT 68
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3
Query: 246 FGGAPGVDMTAFPAFKFEEPKLDPIDEQAPQ 338
FG DM FP F+F + K+DPI QAPQ
Sbjct: 77 FGSDGKTDMLKFPEFQFPDVKVDPI-TQAPQ 106
>BT001763-1|AAN71518.1| 106|Drosophila melanogaster RH08870p
protein.
Length = 106
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/68 (51%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Frame = +2
Query: 26 MLTPSLVS-LRAMRASVIVTRNLAAT--QKAVDPIQQLFLDKIREYKQKSSGGKLVDPSP 196
ML+ SL+S +R +R + A KA DPIQQLFLDK+REYKQKS+GGKLVD +P
Sbjct: 1 MLSQSLLSGMRVLRTEARRNFGIVAPALNKASDPIQQLFLDKVREYKQKSAGGKLVDSNP 60
Query: 197 AIQKRVES 220
I++ +++
Sbjct: 61 DIERELKT 68
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3
Query: 246 FGGAPGVDMTAFPAFKFEEPKLDPIDEQAPQ 338
FG DM FP F+F + K+DPI QAPQ
Sbjct: 77 FGSDGKTDMLKFPEFQFPDVKVDPI-TQAPQ 106
>AE014297-3317|AAF56127.1| 106|Drosophila melanogaster CG4412-PA
protein.
Length = 106
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/68 (51%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Frame = +2
Query: 26 MLTPSLVS-LRAMRASVIVTRNLAAT--QKAVDPIQQLFLDKIREYKQKSSGGKLVDPSP 196
ML+ SL+S +R +R + A KA DPIQQLFLDK+REYKQKS+GGKLVD +P
Sbjct: 1 MLSQSLLSGMRVLRTEARRNFGIVAPALNKASDPIQQLFLDKVREYKQKSAGGKLVDSNP 60
Query: 197 AIQKRVES 220
I++ +++
Sbjct: 61 DIERELKT 68
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3
Query: 246 FGGAPGVDMTAFPAFKFEEPKLDPIDEQAPQ 338
FG DM FP F+F + K+DPI QAPQ
Sbjct: 77 FGSDGKTDMLKFPEFQFPDVKVDPI-TQAPQ 106
>BT023609-1|AAY85009.1| 159|Drosophila melanogaster IP06415p
protein.
Length = 159
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Frame = +2
Query: 53 RAMRASVIVTRNLA--ATQKAVDPIQQLFLDKIREYKQKSSGGKLVDPSPAIQKRVE 217
R ++ S+++ R+++ A+ + DPI Q+FLDK+REY+ KS GK VDP P + ++
Sbjct: 16 RFLKPSLVLCRSVSNTASLRYKDPIYQIFLDKVREYRLKSPKGKPVDPGPEFEAELK 72
Score = 35.5 bits (78), Expect = 0.029
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Frame = +3
Query: 246 FGGAPGVDMTAFPAFKFEEPKLDPID-----EQAPQPKK 347
+GG GVDM FP FK + +DPI E P+P+K
Sbjct: 82 YGGGEGVDMLEFPKFKLPDIDIDPISVDDLPENQPKPEK 120
>AE014296-920|AAF47954.1| 147|Drosophila melanogaster CG12027-PA
protein.
Length = 147
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Frame = +2
Query: 53 RAMRASVIVTRNLA--ATQKAVDPIQQLFLDKIREYKQKSSGGKLVDPSPAIQKRVE 217
R ++ S+++ R+++ A+ + DPI Q+FLDK+REY+ KS GK VDP P + ++
Sbjct: 4 RFLKPSLVLCRSVSNTASLRYKDPIYQIFLDKVREYRLKSPKGKPVDPGPEFEAELK 60
Score = 35.5 bits (78), Expect = 0.029
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Frame = +3
Query: 246 FGGAPGVDMTAFPAFKFEEPKLDPID-----EQAPQPKK 347
+GG GVDM FP FK + +DPI E P+P+K
Sbjct: 70 YGGGEGVDMLEFPKFKLPDIDIDPISVDDLPENQPKPEK 108
>AE014296-910|AAF47948.2| 4390|Drosophila melanogaster CG17150-PA,
isoform A protein.
Length = 4390
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 77 VTRNLAATQKAVDPIQQLFLDKIREYKQKSSGGKLVDPSPAIQKRV 214
+ RN+ T + + D + K SSGG DP+ AI K+V
Sbjct: 4067 INRNVKETNALISGVLLTQTDLMASVKASSSGGAKEDPAIAICKQV 4112
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,950,265
Number of Sequences: 53049
Number of extensions: 232880
Number of successful extensions: 784
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1292733852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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