Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M21
         (539 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    24   0.74 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.3  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   6.9  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   6.9  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   6.9  

>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 0.74
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +3

Query: 315 SYEYLKTLASDVHVVRGDFDE 377
           S E  +TL SD+++++ +FDE
Sbjct: 22  SEETCETLMSDINLIKEEFDE 42


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -1

Query: 515 KDINIELPLHQCQGLL-VTPGHNLMTMNEANTKLPNCYHLLLRVCCIL 375
           KDI    PL +   +  +TP ++  T  +    L  CY  LL V  IL
Sbjct: 10  KDIVFINPLVKYLNIFFITPWYDFPTNQKYYPSLAKCYACLLMVVKIL 57


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +2

Query: 71  TITIKSINAINSGRSN 118
           T ++ S+N +N+GR+N
Sbjct: 244 TSSMLSLNCLNTGRTN 259


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +2

Query: 71  TITIKSINAINSGRSN 118
           T ++ S+N +N+GR+N
Sbjct: 33  TSSMLSLNCLNTGRTN 48


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +2

Query: 71  TITIKSINAINSGRSN 118
           T ++ S+N +N+GR+N
Sbjct: 33  TSSMLSLNCLNTGRTN 48


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,662
Number of Sequences: 336
Number of extensions: 3244
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)