Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_M21
(539 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC095446-1|AAH95446.1| 182|Homo sapiens vacuolar protein sortin... 209 5e-54
AF201946-1|AAF17238.1| 182|Homo sapiens DC7 protein protein. 209 5e-54
AF193795-1|AAF04596.1| 182|Homo sapiens vacuolar sorting protei... 209 5e-54
AF175264-1|AAF89952.1| 182|Homo sapiens vacuolar sorting protei... 209 5e-54
CR457182-1|CAG33463.1| 186|Homo sapiens VPS29 protein. 207 2e-53
BC000880-1|AAH00880.1| 186|Homo sapiens vacuolar protein sortin... 207 2e-53
AF168716-1|AAF87318.1| 186|Homo sapiens x 007 protein protein. 207 2e-53
CR533468-1|CAG38499.1| 182|Homo sapiens VPS29 protein. 206 3e-53
AF201936-1|AAF86872.1| 188|Homo sapiens DC15 protein. 206 5e-53
BC015095-1|AAH15095.1| 87|Homo sapiens VPS29 protein protein. 44 3e-04
DQ988947-1|ABL61261.1| 165|Homo sapiens phostensin protein. 30 6.0
BX119957-21|CAM25925.1| 76|Homo sapiens KIAA1949 protein. 30 6.0
BC066644-1|AAH66644.1| 613|Homo sapiens KIAA1949 protein. 30 6.0
BC006176-1|AAH06176.1| 174|Homo sapiens KIAA1949 protein protein. 30 6.0
AL832318-1|CAD38613.1| 332|Homo sapiens hypothetical protein pr... 30 6.0
AL732442-14|CAM25008.1| 613|Homo sapiens KIAA1949 protein. 30 6.0
AL662798-1|CAM25551.1| 613|Homo sapiens KIAA1949 protein. 30 6.0
AL662797-1|CAM25509.1| 613|Homo sapiens KIAA1949 protein. 30 6.0
AB075829-1|BAB85535.1| 662|Homo sapiens KIAA1949 protein protein. 30 6.0
AB073600-1|BAD38640.1| 613|Homo sapiens putative protein produc... 30 6.0
>BC095446-1|AAH95446.1| 182|Homo sapiens vacuolar protein sorting
29 homolog (S. cerevisiae) protein.
Length = 182
Score = 209 bits (510), Expect = 5e-54
Identities = 93/119 (78%), Positives = 102/119 (85%)
Frame = +3
Query: 183 MLVLVLGDLHIPHRCSSXXXXXXXXXXXGRIQHILCTGNLCTKESYEYLKTLASDVHVVR 362
MLVLVLGDLHIPHRC+S G+IQHILCTGNLCTKESY+YLKTLA DVH+VR
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60
Query: 363 GDFDENTTYPEQKVITVGQFRIGLIHGHQVVPWGDEESLALVQRQLDVDILISGHTHRF 539
GDFDEN YPEQKV+TVGQF+IGLIHGHQV+PWGD SLAL+QRQ DVDILISGHTH+F
Sbjct: 61 GDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKF 119
>AF201946-1|AAF17238.1| 182|Homo sapiens DC7 protein protein.
Length = 182
Score = 209 bits (510), Expect = 5e-54
Identities = 93/119 (78%), Positives = 102/119 (85%)
Frame = +3
Query: 183 MLVLVLGDLHIPHRCSSXXXXXXXXXXXGRIQHILCTGNLCTKESYEYLKTLASDVHVVR 362
MLVLVLGDLHIPHRC+S G+IQHILCTGNLCTKESY+YLKTLA DVH+VR
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60
Query: 363 GDFDENTTYPEQKVITVGQFRIGLIHGHQVVPWGDEESLALVQRQLDVDILISGHTHRF 539
GDFDEN YPEQKV+TVGQF+IGLIHGHQV+PWGD SLAL+QRQ DVDILISGHTH+F
Sbjct: 61 GDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKF 119
>AF193795-1|AAF04596.1| 182|Homo sapiens vacuolar sorting protein
VPS29/PEP11 protein.
Length = 182
Score = 209 bits (510), Expect = 5e-54
Identities = 93/119 (78%), Positives = 102/119 (85%)
Frame = +3
Query: 183 MLVLVLGDLHIPHRCSSXXXXXXXXXXXGRIQHILCTGNLCTKESYEYLKTLASDVHVVR 362
MLVLVLGDLHIPHRC+S G+IQHILCTGNLCTKESY+YLKTLA DVH+VR
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60
Query: 363 GDFDENTTYPEQKVITVGQFRIGLIHGHQVVPWGDEESLALVQRQLDVDILISGHTHRF 539
GDFDEN YPEQKV+TVGQF+IGLIHGHQV+PWGD SLAL+QRQ DVDILISGHTH+F
Sbjct: 61 GDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKF 119
>AF175264-1|AAF89952.1| 182|Homo sapiens vacuolar sorting protein
29 protein.
Length = 182
Score = 209 bits (510), Expect = 5e-54
Identities = 93/119 (78%), Positives = 102/119 (85%)
Frame = +3
Query: 183 MLVLVLGDLHIPHRCSSXXXXXXXXXXXGRIQHILCTGNLCTKESYEYLKTLASDVHVVR 362
MLVLVLGDLHIPHRC+S G+IQHILCTGNLCTKESY+YLKTLA DVH+VR
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60
Query: 363 GDFDENTTYPEQKVITVGQFRIGLIHGHQVVPWGDEESLALVQRQLDVDILISGHTHRF 539
GDFDEN YPEQKV+TVGQF+IGLIHGHQV+PWGD SLAL+QRQ DVDILISGHTH+F
Sbjct: 61 GDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKF 119
>CR457182-1|CAG33463.1| 186|Homo sapiens VPS29 protein.
Length = 186
Score = 207 bits (505), Expect = 2e-53
Identities = 92/118 (77%), Positives = 101/118 (85%)
Frame = +3
Query: 186 LVLVLGDLHIPHRCSSXXXXXXXXXXXGRIQHILCTGNLCTKESYEYLKTLASDVHVVRG 365
LVLVLGDLHIPHRC+S G+IQHILCTGNLCTKESY+YLKTLA DVH+VRG
Sbjct: 6 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRG 65
Query: 366 DFDENTTYPEQKVITVGQFRIGLIHGHQVVPWGDEESLALVQRQLDVDILISGHTHRF 539
DFDEN YPEQKV+TVGQF+IGLIHGHQV+PWGD SLAL+QRQ DVDILISGHTH+F
Sbjct: 66 DFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKF 123
>BC000880-1|AAH00880.1| 186|Homo sapiens vacuolar protein sorting
29 homolog (S. cerevisiae) protein.
Length = 186
Score = 207 bits (505), Expect = 2e-53
Identities = 92/118 (77%), Positives = 101/118 (85%)
Frame = +3
Query: 186 LVLVLGDLHIPHRCSSXXXXXXXXXXXGRIQHILCTGNLCTKESYEYLKTLASDVHVVRG 365
LVLVLGDLHIPHRC+S G+IQHILCTGNLCTKESY+YLKTLA DVH+VRG
Sbjct: 6 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRG 65
Query: 366 DFDENTTYPEQKVITVGQFRIGLIHGHQVVPWGDEESLALVQRQLDVDILISGHTHRF 539
DFDEN YPEQKV+TVGQF+IGLIHGHQV+PWGD SLAL+QRQ DVDILISGHTH+F
Sbjct: 66 DFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKF 123
>AF168716-1|AAF87318.1| 186|Homo sapiens x 007 protein protein.
Length = 186
Score = 207 bits (505), Expect = 2e-53
Identities = 92/118 (77%), Positives = 101/118 (85%)
Frame = +3
Query: 186 LVLVLGDLHIPHRCSSXXXXXXXXXXXGRIQHILCTGNLCTKESYEYLKTLASDVHVVRG 365
LVLVLGDLHIPHRC+S G+IQHILCTGNLCTKESY+YLKTLA DVH+VRG
Sbjct: 6 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRG 65
Query: 366 DFDENTTYPEQKVITVGQFRIGLIHGHQVVPWGDEESLALVQRQLDVDILISGHTHRF 539
DFDEN YPEQKV+TVGQF+IGLIHGHQV+PWGD SLAL+QRQ DVDILISGHTH+F
Sbjct: 66 DFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKF 123
>CR533468-1|CAG38499.1| 182|Homo sapiens VPS29 protein.
Length = 182
Score = 206 bits (504), Expect = 3e-53
Identities = 92/118 (77%), Positives = 101/118 (85%)
Frame = +3
Query: 183 MLVLVLGDLHIPHRCSSXXXXXXXXXXXGRIQHILCTGNLCTKESYEYLKTLASDVHVVR 362
MLVLVLGDLHIPHRC+S G+IQHILCTGNLCTKESY+YLKTLA DVH+VR
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60
Query: 363 GDFDENTTYPEQKVITVGQFRIGLIHGHQVVPWGDEESLALVQRQLDVDILISGHTHR 536
GDFDEN YPEQKV+TVGQF+IGLIHGHQV+PWGD SLAL+QRQ DVDILISGHTH+
Sbjct: 61 GDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHK 118
>AF201936-1|AAF86872.1| 188|Homo sapiens DC15 protein.
Length = 188
Score = 206 bits (502), Expect = 5e-53
Identities = 91/118 (77%), Positives = 101/118 (85%)
Frame = +3
Query: 186 LVLVLGDLHIPHRCSSXXXXXXXXXXXGRIQHILCTGNLCTKESYEYLKTLASDVHVVRG 365
+VLVLGDLHIPHRC+S G+IQHILCTGNLCTKESY+YLKTLA DVH+VRG
Sbjct: 8 VVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRG 67
Query: 366 DFDENTTYPEQKVITVGQFRIGLIHGHQVVPWGDEESLALVQRQLDVDILISGHTHRF 539
DFDEN YPEQKV+TVGQF+IGLIHGHQV+PWGD SLAL+QRQ DVDILISGHTH+F
Sbjct: 68 DFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKF 125
>BC015095-1|AAH15095.1| 87|Homo sapiens VPS29 protein protein.
Length = 87
Score = 44.0 bits (99), Expect = 3e-04
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +3
Query: 474 SLALVQRQLDVDILISGHTHRF 539
SLAL+QRQ DVDILISGHTH+F
Sbjct: 3 SLALLQRQFDVDILISGHTHKF 24
>DQ988947-1|ABL61261.1| 165|Homo sapiens phostensin protein.
Length = 165
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = -3
Query: 483 VPGTPRHPRAQPDDHE*GQYETAQLLSPFAQGML 382
VP P P AQPDD E E LL P QG L
Sbjct: 121 VPSAPNPPAAQPDDEE--DEEELLLLQPELQGGL 152
>BX119957-21|CAM25925.1| 76|Homo sapiens KIAA1949 protein.
Length = 76
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = -3
Query: 483 VPGTPRHPRAQPDDHE*GQYETAQLLSPFAQGML 382
VP P P AQPDD E E LL P QG L
Sbjct: 32 VPSAPNPPAAQPDDEE--DEEELLLLQPELQGGL 63
>BC066644-1|AAH66644.1| 613|Homo sapiens KIAA1949 protein.
Length = 613
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = -3
Query: 483 VPGTPRHPRAQPDDHE*GQYETAQLLSPFAQGML 382
VP P P AQPDD E E LL P QG L
Sbjct: 569 VPSAPNPPAAQPDDEE--DEEELLLLQPELQGGL 600
>BC006176-1|AAH06176.1| 174|Homo sapiens KIAA1949 protein protein.
Length = 174
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = -3
Query: 483 VPGTPRHPRAQPDDHE*GQYETAQLLSPFAQGML 382
VP P P AQPDD E E LL P QG L
Sbjct: 130 VPSAPNPPAAQPDDEE--DEEELLLLQPELQGGL 161
>AL832318-1|CAD38613.1| 332|Homo sapiens hypothetical protein
protein.
Length = 332
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = -3
Query: 483 VPGTPRHPRAQPDDHE*GQYETAQLLSPFAQGML 382
VP P P AQPDD E E LL P QG L
Sbjct: 288 VPSAPNPPAAQPDDEE--DEEELLLLQPELQGGL 319
>AL732442-14|CAM25008.1| 613|Homo sapiens KIAA1949 protein.
Length = 613
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = -3
Query: 483 VPGTPRHPRAQPDDHE*GQYETAQLLSPFAQGML 382
VP P P AQPDD E E LL P QG L
Sbjct: 569 VPSAPNPPAAQPDDEE--DEEELLLLQPELQGGL 600
>AL662798-1|CAM25551.1| 613|Homo sapiens KIAA1949 protein.
Length = 613
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = -3
Query: 483 VPGTPRHPRAQPDDHE*GQYETAQLLSPFAQGML 382
VP P P AQPDD E E LL P QG L
Sbjct: 569 VPSAPNPPAAQPDDEE--DEEELLLLQPELQGGL 600
>AL662797-1|CAM25509.1| 613|Homo sapiens KIAA1949 protein.
Length = 613
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = -3
Query: 483 VPGTPRHPRAQPDDHE*GQYETAQLLSPFAQGML 382
VP P P AQPDD E E LL P QG L
Sbjct: 569 VPSAPNPPAAQPDDEE--DEEELLLLQPELQGGL 600
>AB075829-1|BAB85535.1| 662|Homo sapiens KIAA1949 protein protein.
Length = 662
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = -3
Query: 483 VPGTPRHPRAQPDDHE*GQYETAQLLSPFAQGML 382
VP P P AQPDD E E LL P QG L
Sbjct: 618 VPSAPNPPAAQPDDEE--DEEELLLLQPELQGGL 649
>AB073600-1|BAD38640.1| 613|Homo sapiens putative protein product
of HKMT1098 protein.
Length = 613
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = -3
Query: 483 VPGTPRHPRAQPDDHE*GQYETAQLLSPFAQGML 382
VP P P AQPDD E E LL P QG L
Sbjct: 569 VPSAPNPPAAQPDDEE--DEEELLLLQPELQGGL 600
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,198,758
Number of Sequences: 237096
Number of extensions: 1835882
Number of successful extensions: 3557
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3557
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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