Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_M21
(539 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g47810.3 68416.m05210 calcineurin-like phosphoesterase family... 174 4e-44
At3g47810.1 68416.m05209 calcineurin-like phosphoesterase family... 174 4e-44
At3g47810.2 68416.m05208 calcineurin-like phosphoesterase family... 126 1e-29
At1g20850.1 68414.m02612 cysteine endopeptidase, papain-type (XC... 30 0.86
At3g43960.1 68416.m04706 cysteine proteinase, putative contains ... 30 1.1
At4g28080.1 68417.m04027 expressed protein 28 4.6
At1g15290.1 68414.m01830 tetratricopeptide repeat (TPR)-containi... 28 4.6
At1g01320.1 68414.m00048 tetratricopeptide repeat (TPR)-containi... 28 4.6
At5g47510.1 68418.m05866 SEC14 cytosolic factor family protein /... 27 6.1
At4g01910.1 68417.m00251 DC1 domain-containing protein contains ... 27 8.0
At1g24490.1 68414.m03084 60 kDa inner membrane family protein si... 27 8.0
>At3g47810.3 68416.m05210 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 190
Score = 174 bits (423), Expect = 4e-44
Identities = 71/119 (59%), Positives = 94/119 (78%)
Frame = +3
Query: 183 MLVLVLGDLHIPHRCSSXXXXXXXXXXXGRIQHILCTGNLCTKESYEYLKTLASDVHVVR 362
+LVL LGDLH+PHR + G+IQHI+CTGNLC KE ++YLKT+ D+H+VR
Sbjct: 2 VLVLALGDLHVPHRAADLPPKFKSMLVPGKIQHIICTGNLCIKEIHDYLKTICPDLHIVR 61
Query: 363 GDFDENTTYPEQKVITVGQFRIGLIHGHQVVPWGDEESLALVQRQLDVDILISGHTHRF 539
G+FDE+ YPE K +T+GQF++GL HGHQV+PWGD +SLA++QRQL VDIL++GHTH+F
Sbjct: 62 GEFDEDARYPENKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLGVDILVTGHTHQF 120
>At3g47810.1 68416.m05209 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 190
Score = 174 bits (423), Expect = 4e-44
Identities = 71/119 (59%), Positives = 94/119 (78%)
Frame = +3
Query: 183 MLVLVLGDLHIPHRCSSXXXXXXXXXXXGRIQHILCTGNLCTKESYEYLKTLASDVHVVR 362
+LVL LGDLH+PHR + G+IQHI+CTGNLC KE ++YLKT+ D+H+VR
Sbjct: 2 VLVLALGDLHVPHRAADLPPKFKSMLVPGKIQHIICTGNLCIKEIHDYLKTICPDLHIVR 61
Query: 363 GDFDENTTYPEQKVITVGQFRIGLIHGHQVVPWGDEESLALVQRQLDVDILISGHTHRF 539
G+FDE+ YPE K +T+GQF++GL HGHQV+PWGD +SLA++QRQL VDIL++GHTH+F
Sbjct: 62 GEFDEDARYPENKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLGVDILVTGHTHQF 120
>At3g47810.2 68416.m05208 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 180
Score = 126 bits (303), Expect = 1e-29
Identities = 49/78 (62%), Positives = 68/78 (87%)
Frame = +3
Query: 306 TKESYEYLKTLASDVHVVRGDFDENTTYPEQKVITVGQFRIGLIHGHQVVPWGDEESLAL 485
+KE ++YLKT+ D+H+VRG+FDE+ YPE K +T+GQF++GL HGHQV+PWGD +SLA+
Sbjct: 33 SKEIHDYLKTICPDLHIVRGEFDEDARYPENKTLTIGQFKLGLCHGHQVIPWGDLDSLAM 92
Query: 486 VQRQLDVDILISGHTHRF 539
+QRQL VDIL++GHTH+F
Sbjct: 93 LQRQLGVDILVTGHTHQF 110
>At1g20850.1 68414.m02612 cysteine endopeptidase, papain-type (XCP2)
identical to papain-type cysteine endopeptidase XCP2
GI:6708183 from [Arabidopsis thaliana]
Length = 356
Score = 30.3 bits (65), Expect = 0.86
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +3
Query: 435 IHGHQVVPWGDEESL--ALVQRQLDVDILISGHTHRF 539
I+GHQ VP DE+SL AL + L V I SG +F
Sbjct: 246 INGHQDVPTNDEKSLLKALAHQPLSVAIDASGREFQF 282
>At3g43960.1 68416.m04706 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 376
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 399 KVITVGQFRIGLIHGHQVVPWGDEESLALVQRQLDVDILIS 521
K I + R+ I+GH+VVP DE SL + ++IS
Sbjct: 227 KAIEMKTTRVVTINGHEVVPVNDEMSLKKAVAYQPISVMIS 267
>At4g28080.1 68417.m04027 expressed protein
Length = 1660
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 363 GDFDENTTYPEQKVITVGQFRIGLIHGHQVVPWGD 467
GDF++ T Y +QK + + + +GL H + +GD
Sbjct: 789 GDFNQATIY-QQKALDINERELGLDHPDTMKSYGD 822
>At1g15290.1 68414.m01830 tetratricopeptide repeat (TPR)-containing
protein ESTs gb|F20110 and gb|F20109 come from this
gene; contains Pfam profile PF00515: TPR Domain
Length = 1558
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 363 GDFDENTTYPEQKVITVGQFRIGLIHGHQVVPWGD 467
GDF++ T Y +QK + + + +GL H + +GD
Sbjct: 854 GDFNQATIY-QQKALDINERELGLDHPDTMKSYGD 887
>At1g01320.1 68414.m00048 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|P46825 Kinesin light chain
(KLC) {Loligo pealeii}; contains Pfam profile PF00515:
TPR Domain
Length = 1797
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 363 GDFDENTTYPEQKVITVGQFRIGLIHGHQVVPWGD 467
GDF++ T Y +QK + + + +GL H + +GD
Sbjct: 936 GDFNQATIY-QQKALDINERELGLDHPDTMKSYGD 969
>At5g47510.1 68418.m05866 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus], SEC14 cytosolic factor
(Phosphatidylinositol/phosphatidylcholine transfer
protein) (PI/PCTP) (SP:P24859) [Kluyveromyces lactis]
and to SEC14 cytosolic factor (SP:P53989) [Candida
glabrata]
Length = 376
Score = 27.5 bits (58), Expect = 6.1
Identities = 13/56 (23%), Positives = 24/56 (42%)
Frame = +3
Query: 345 DVHVVRGDFDENTTYPEQKVITVGQFRIGLIHGHQVVPWGDEESLALVQRQLDVDI 512
D+H+ G ++ P + + + L+HGH GD +L + D D+
Sbjct: 7 DIHISDGTMNKEEQSPNNEEMVEAFRNLLLLHGHLPDKHGDHNTLRRFLKMRDFDL 62
>At4g01910.1 68417.m00251 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 651
Score = 27.1 bits (57), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 414 GQFRIGLIHGHQVVPWGD 467
G + LIH HQ++PW D
Sbjct: 5 GVVSLPLIHNHQMMPWND 22
>At1g24490.1 68414.m03084 60 kDa inner membrane family protein
similar to chloroplast membrane protein (ALBINO3)
(GI:3927828) [Arabidopsis thaliana]
Length = 1013
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 363 GDFDENTTYPEQKVITVGQFRIGLI 437
GD+DE +TYP V+ G+ R ++
Sbjct: 106 GDYDEESTYPTFDVVYDGKHRYSVV 130
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,367,216
Number of Sequences: 28952
Number of extensions: 250817
Number of successful extensions: 623
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1003808112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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