Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M19
         (258 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.025
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   1.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   1.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   1.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   1.6  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   2.1  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    20   3.7  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    19   6.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    19   6.5  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    19   8.6  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    19   8.6  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    19   8.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    19   8.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 0.025
 Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
 Frame = -3

Query: 205 FLFGVYFHFPR*IIFLVLPLFSCSSHVQFSGFPRFLVSFDQY*LSFRLLSS----YDSLL 38
           FL  +Y  F   IIF +  LF C + + F+    FL+  D + L    L      Y + +
Sbjct: 162 FLLCIYHFFCAFIIFTMHLLF-CCAFIFFNMHLLFLLCLDYFTLHLLFLPCIYYFYSAFI 220

Query: 37  VFSYEIVFFILV 2
           +F+  ++F+ ++
Sbjct: 221 IFTIHLLFYCVL 232


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 1.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 169  IIFLVLPLFSCSSHVQ 122
            I+F +L  F+C S++Q
Sbjct: 954  ILFFMLVCFTCKSNIQ 969


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 1.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 169  IIFLVLPLFSCSSHVQ 122
            I+F +L  F+C S++Q
Sbjct: 954  ILFFMLVCFTCKSNIQ 969


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 1.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 169  IIFLVLPLFSCSSHVQ 122
            I+F +L  F+C S++Q
Sbjct: 954  ILFFMLVCFTCKSNIQ 969


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 1.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 169  IIFLVLPLFSCSSHVQ 122
            I+F +L  F+C S++Q
Sbjct: 954  ILFFMLVCFTCKSNIQ 969


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 2.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -3

Query: 169 IIFLVLPLFSCSSHVQFSGFPRFLVSF 89
           IIF+ L ++   + V+ SGF  F+ ++
Sbjct: 15  IIFVSLEIYHIYTVVEESGFENFVKTY 41


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 20.2 bits (40), Expect = 3.7
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 173 TREMKVDAEKKRRKK 217
           +REM+  AEK RR K
Sbjct: 29  SREMRNRAEKMRRDK 43


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 19.4 bits (38), Expect = 6.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 76  LSFRLLSSYDSLLV 35
           +SF +L S DSL++
Sbjct: 75  ISFEILGSLDSLIL 88


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 19.4 bits (38), Expect = 6.5
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +1

Query: 43   RNHKMTTDGNLISIDQKIPKNVGS 114
            R H  T++ ++ +    IP N G+
Sbjct: 1008 RTHSATSNSSVNANTNNIPTNAGT 1031


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 19.0 bits (37), Expect = 8.6
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = +2

Query: 119 KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
           KL   +  KKR   K ++TR+    +     ++T++    ++ S K
Sbjct: 366 KLCGMKIVKKRRKDKREITRKSTSSSTHTSSQQTSDSFLSKRNSEK 411


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 19.0 bits (37), Expect = 8.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 226 ICSLLSPFLFGVYFHF 179
           I   +SPF+ G   HF
Sbjct: 34  IAGCVSPFVIGYVKHF 49


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 19.0 bits (37), Expect = 8.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 70  NLISIDQKIPKNVGSLKTGREKN 138
           NL ++DQK  + V       EKN
Sbjct: 352 NLSAVDQKTRQEVHMFLMAIEKN 374


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 19.0 bits (37), Expect = 8.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 70  NLISIDQKIPKNVGSLKTGREKN 138
           NL ++DQK  + V       EKN
Sbjct: 352 NLSAVDQKTRQEVHMFLMAIEKN 374


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,084
Number of Sequences: 336
Number of extensions: 907
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4058134
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)