Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_M19
(258 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D49677-1|BAA08533.1| 482|Homo sapiens U2AF1-RS2 protein. 31 0.67
BC113480-1|AAI13481.1| 482|Homo sapiens zinc finger (CCCH type)... 31 0.67
BC113454-1|AAI13455.1| 482|Homo sapiens zinc finger (CCCH type)... 31 0.67
BC050451-1|AAH50451.2| 482|Homo sapiens zinc finger (CCCH type)... 31 0.67
U84664-1|AAC51185.1| 1411|Homo sapiens putative nucleolar traffi... 31 0.88
U79659-1|AAB40722.1| 1411|Homo sapiens Treacher Collins syndrome... 31 0.88
U76366-1|AAC51181.1| 1411|Homo sapiens TCOF1 protein. 31 0.88
U40847-1|AAC50903.1| 1411|Homo sapiens TCOF1 protein. 31 0.88
AY460334-1|AAR87774.1| 1488|Homo sapiens treacle major isoform p... 31 0.88
S42457-1|AAB22778.1| 686|Homo sapiens rod photoreceptor cGMP-ga... 30 1.2
BC001584-1|AAH01584.1| 718|Homo sapiens LOC124245 protein protein. 30 1.2
AK127997-1|BAC87222.1| 148|Homo sapiens protein ( Homo sapiens ... 30 1.2
AK122593-1|BAC56934.1| 229|Homo sapiens FLJ00419 protein protein. 30 1.2
M84741-1|AAA52010.1| 690|Homo sapiens cGMP-gated cation channel... 30 1.5
AC107068-3|AAY40919.1| 690|Homo sapiens unknown protein. 30 1.5
BC031825-1|AAH31825.1| 560|Homo sapiens TAOK2 protein protein. 29 2.0
X98494-1|CAA67120.1| 672|Homo sapiens M phase phosphoprotein 10... 29 2.7
BC126389-1|AAI26390.1| 681|Homo sapiens M-phase phosphoprotein ... 29 2.7
BC050594-1|AAH50594.1| 550|Homo sapiens NCOR1 protein protein. 29 2.7
AK131255-1|BAD18434.1| 957|Homo sapiens protein ( Homo sapiens ... 29 2.7
L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein. 29 3.6
L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein. 29 3.6
BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif prote... 29 3.6
BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein. 29 3.6
AL357374-12|CAI13607.1| 193|Homo sapiens RNA binding motif prot... 29 3.6
AL357374-11|CAI13608.1| 202|Homo sapiens RNA binding motif prot... 29 3.6
AL357374-10|CAI13606.1| 231|Homo sapiens RNA binding motif prot... 29 3.6
AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif prote... 29 3.6
AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif prote... 29 3.6
X13629-1|CAA31955.1| 396|Homo sapiens apolipoprotein A-IV precu... 28 4.7
M14642-1|AAA51745.1| 396|Homo sapiens APOA4 protein. 28 4.7
M14566-1|AAA51748.1| 376|Homo sapiens APOA4 protein. 28 4.7
M13654-1|AAA51744.1| 396|Homo sapiens APOA4 protein. 28 4.7
M10373-1|AAB59516.1| 244|Homo sapiens APOA4 protein. 28 4.7
J02758-1|AAA96731.1| 396|Homo sapiens APOA4 protein. 28 4.7
BC113596-1|AAI13597.1| 396|Homo sapiens apolipoprotein A-IV pro... 28 4.7
BC113594-1|AAI13595.1| 396|Homo sapiens apolipoprotein A-IV pro... 28 4.7
BC074764-1|AAH74764.1| 396|Homo sapiens apolipoprotein A-IV pro... 28 4.7
AY555191-2|AAS68228.1| 396|Homo sapiens apolipoprotein A-IV pro... 28 4.7
AY422950-1|AAQ91809.1| 396|Homo sapiens apolipoprotein A-IV pro... 28 4.7
AF406992-1|AAL11723.1| 2817|Homo sapiens A-kinase anchoring prot... 28 4.7
AF387101-1|AAL40923.1| 2813|Homo sapiens protein kinase A anchor... 28 4.7
AF126008-1|AAD21311.1| 1429|Homo sapiens breast cancer nuclear r... 28 4.7
AB209414-1|BAD92651.1| 1308|Homo sapiens A-kinase anchor protein... 28 4.7
AB055890-1|BAB62913.1| 2813|Homo sapiens guanine nucleotide exch... 28 4.7
AB033337-1|BAB69456.1| 1820|Homo sapiens mitotic kinesin-related... 28 4.7
BC115737-1|AAI15738.1| 1272|Homo sapiens UPF2 regulator of nonse... 28 6.2
BC114964-1|AAI14965.1| 1272|Homo sapiens UPF2 regulator of nonse... 28 6.2
BC090919-1|AAH90919.1| 109|Homo sapiens UPF2 protein protein. 28 6.2
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain... 28 6.2
AY013249-1|AAG48509.1| 1272|Homo sapiens hUPF2 protein. 28 6.2
AL645617-1|CAI16755.1| 1272|Homo sapiens UPF2 regulator of nonse... 28 6.2
AL138898-4|CAH73458.1| 1272|Homo sapiens UPF2 regulator of nonse... 28 6.2
AF318574-1|AAG60689.1| 1272|Homo sapiens UPF2 protein. 28 6.2
AF301013-1|AAG33225.1| 1272|Homo sapiens regulator of nonsense t... 28 6.2
AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain... 28 6.2
AB037829-1|BAA92646.1| 1298|Homo sapiens KIAA1408 protein protein. 28 6.2
M84739-1|AAA51916.1| 417|Homo sapiens calreticulin protein. 27 8.2
M32294-1|AAA36582.1| 417|Homo sapiens protein ( Human Ro ribonu... 27 8.2
CR457070-1|CAG33351.1| 417|Homo sapiens CALR protein. 27 8.2
BT007448-1|AAP36116.1| 417|Homo sapiens calreticulin protein. 27 8.2
BC026291-1|AAH26291.1| 440|Homo sapiens SLC22A12 protein protein. 27 8.2
BC020493-1|AAH20493.1| 417|Homo sapiens calreticulin protein. 27 8.2
BC017822-1|AAH17822.1| 460|Homo sapiens Unknown (protein for IM... 27 8.2
BC007911-1|AAH07911.1| 417|Homo sapiens calreticulin protein. 27 8.2
BC002500-1|AAH02500.1| 417|Homo sapiens calreticulin protein. 27 8.2
AY047586-1|AAL13126.1| 417|Homo sapiens calreticulin protein. 27 8.2
AD000092-6|AAB51176.1| 417|Homo sapiens calreticulin protein. 27 8.2
>D49677-1|BAA08533.1| 482|Homo sapiens U2AF1-RS2 protein.
Length = 482
Score = 31.1 bits (67), Expect = 0.67
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 19 QFRKKKLIRNHKMTTDGNLISIDQKIPKNVGSLKTGREKNN*KEGEQER*FNEGNESRRR 198
Q ++KL+ + + +QK + K E ++ EQER E E ++R
Sbjct: 57 QLEEEKLLERERQRLHEEWLLREQKAQEEFRIKKEKEEAAKKRQEEQERKLKEQWEEQQR 116
Query: 199 KETEKEDCK 225
KE E+E+ K
Sbjct: 117 KEREEEEQK 125
>BC113480-1|AAI13481.1| 482|Homo sapiens zinc finger (CCCH type),
RNA-binding motif and serine/arginine rich 2 protein.
Length = 482
Score = 31.1 bits (67), Expect = 0.67
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 19 QFRKKKLIRNHKMTTDGNLISIDQKIPKNVGSLKTGREKNN*KEGEQER*FNEGNESRRR 198
Q ++KL+ + + +QK + K E ++ EQER E E ++R
Sbjct: 57 QLEEEKLLERERQRLHEEWLLREQKAQEEFRIKKEKEEAAKKRQEEQERKLKEQWEEQQR 116
Query: 199 KETEKEDCK 225
KE E+E+ K
Sbjct: 117 KEREEEEQK 125
>BC113454-1|AAI13455.1| 482|Homo sapiens zinc finger (CCCH type),
RNA-binding motif and serine/arginine rich 2 protein.
Length = 482
Score = 31.1 bits (67), Expect = 0.67
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 19 QFRKKKLIRNHKMTTDGNLISIDQKIPKNVGSLKTGREKNN*KEGEQER*FNEGNESRRR 198
Q ++KL+ + + +QK + K E ++ EQER E E ++R
Sbjct: 57 QLEEEKLLERERQRLHEEWLLREQKAQEEFRIKKEKEEAAKKRQEEQERKLKEQWEEQQR 116
Query: 199 KETEKEDCK 225
KE E+E+ K
Sbjct: 117 KEREEEEQK 125
>BC050451-1|AAH50451.2| 482|Homo sapiens zinc finger (CCCH type),
RNA-binding motif and serine/arginine rich 2 protein.
Length = 482
Score = 31.1 bits (67), Expect = 0.67
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 19 QFRKKKLIRNHKMTTDGNLISIDQKIPKNVGSLKTGREKNN*KEGEQER*FNEGNESRRR 198
Q ++KL+ + + +QK + K E ++ EQER E E ++R
Sbjct: 57 QLEEEKLLERERQRLHEEWLLREQKAQEEFRIKKEKEEAAKKRQEEQERKLKEQWEEQQR 116
Query: 199 KETEKEDCK 225
KE E+E+ K
Sbjct: 117 KEREEEEQK 125
>U84664-1|AAC51185.1| 1411|Homo sapiens putative nucleolar trafficking
phosphoprotein protein.
Length = 1411
Score = 30.7 bits (66), Expect = 0.88
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 125 DVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
D K+E KK D ++ K EKK++ K A+ +D S K
Sbjct: 1355 DQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQK 1398
>U79659-1|AAB40722.1| 1411|Homo sapiens Treacher Collins syndrome
protein.
Length = 1411
Score = 30.7 bits (66), Expect = 0.88
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 125 DVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
D K+E KK D ++ K EKK++ K A+ +D S K
Sbjct: 1355 DQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQK 1398
>U76366-1|AAC51181.1| 1411|Homo sapiens TCOF1 protein.
Length = 1411
Score = 30.7 bits (66), Expect = 0.88
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 125 DVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
D K+E KK D ++ K EKK++ K A+ +D S K
Sbjct: 1355 DQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQK 1398
>U40847-1|AAC50903.1| 1411|Homo sapiens TCOF1 protein.
Length = 1411
Score = 30.7 bits (66), Expect = 0.88
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 125 DVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
D K+E KK D ++ K EKK++ K A+ +D S K
Sbjct: 1355 DQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQK 1398
>AY460334-1|AAR87774.1| 1488|Homo sapiens treacle major isoform
protein.
Length = 1488
Score = 30.7 bits (66), Expect = 0.88
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 125 DVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
D K+E KK D ++ K EKK++ K A+ +D S K
Sbjct: 1432 DQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQK 1475
>S42457-1|AAB22778.1| 686|Homo sapiens rod photoreceptor cGMP-gated
channel protein.
Length = 686
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRS 250
++ KK + K D E K D EKK++KK + + ++S
Sbjct: 101 KKKKKKEKKSKSDNKNENKNDPEKKKKKKDKEKKKKEEKS 140
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 134 RTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
++ K ENK D ++ K D EKK KK +D+++ K
Sbjct: 111 KSDNKNENKNDPEKKKKKKDKEKK--KKEEKSKDKKEEEKK 149
>BC001584-1|AAH01584.1| 718|Homo sapiens LOC124245 protein protein.
Length = 718
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
R ++REN++ + RE + D E++RR++ E R+R
Sbjct: 169 RERERERENRQRERERERERDRERERRQRERERERERER 207
>AK127997-1|BAC87222.1| 148|Homo sapiens protein ( Homo sapiens
cDNA FLJ46115 fis, clone TESTI2037085. ).
Length = 148
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 89 KRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
K+ +K + K ++ KK++ KK R+ K +KKRRK+ RR+R
Sbjct: 53 KKKKKKKKKKKKKNKKKKKKKKKKKKKKKRKKKKKKKKKRRKRRRRRRRRRRR 105
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/56 (25%), Positives = 31/56 (55%)
Frame = +2
Query: 89 KRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
K+ +K + K ++ KK++ KK ++ K +KK++KK N + ++++ K
Sbjct: 21 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKK 76
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/56 (25%), Positives = 31/56 (55%)
Frame = +2
Query: 89 KRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
K+ +K + K ++ KK++ KK ++ K + +KK++KK + +R++ K
Sbjct: 32 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKRKKKKK 87
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +2
Query: 89 KRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
K+ +K + K ++ KK++NKK ++ K +KKR+KK + RR+R
Sbjct: 44 KKKKKKKKKKKKKKKKKKKKKKNKKKK-KKKKKKKKKKKRKKKKKKKKKRRKR 95
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/57 (24%), Positives = 31/57 (54%)
Frame = +2
Query: 86 IKRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
+K+ +K + K R+ KK++ KK ++ K +KK++KK + ++++ K
Sbjct: 1 MKKKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 57
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +2
Query: 89 KRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
KR +K + K ++ KK++ KK ++ K +KK++KK + ++ + K
Sbjct: 15 KRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKK 70
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/56 (23%), Positives = 31/56 (55%)
Frame = +2
Query: 89 KRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
K+ +K + K ++ KK++ KK ++ K +KK++KK ++++++ K
Sbjct: 18 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKK 73
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +2
Query: 89 KRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
K+ +K + K ++ KK++ KK ++ K KK++KK + +++R K
Sbjct: 30 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKRKKK 85
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/56 (25%), Positives = 30/56 (53%)
Frame = +2
Query: 89 KRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
K+ +K + K ++ KK++ KK ++ K +KK++KK + R+++ K
Sbjct: 33 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKRKKKKKK 88
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +2
Query: 89 KRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
K+ +K + K ++ KK++ KK ++ K +KK++KK RR+R
Sbjct: 49 KKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKRKKKKKKKKKRRKRRRRRRR 101
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/56 (23%), Positives = 31/56 (55%)
Frame = +2
Query: 89 KRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
K+ +K + K ++ KK++ KK ++ K +KK++KK + +++++ K
Sbjct: 13 KKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKK 68
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/56 (23%), Positives = 30/56 (53%)
Frame = +2
Query: 89 KRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
K+ +K + K ++ KK++ KK ++ K +KK++KK + ++++ K
Sbjct: 23 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKK 78
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/56 (23%), Positives = 30/56 (53%)
Frame = +2
Query: 89 KRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
K+ +K + K ++ KK++ KK ++ K +KK++KK + ++++ K
Sbjct: 5 KKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 60
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/56 (23%), Positives = 30/56 (53%)
Frame = +2
Query: 89 KRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
K+ +K + K ++ KK++ KK ++ K +KK++KK + ++++ K
Sbjct: 7 KKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 62
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/56 (23%), Positives = 30/56 (53%)
Frame = +2
Query: 89 KRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
K+ +K + K ++ KK++ KK ++ K +KK++KK + ++++ K
Sbjct: 8 KKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 63
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/56 (23%), Positives = 30/56 (53%)
Frame = +2
Query: 89 KRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
K+ +K + K ++ KK++ KK ++ K +KK++KK + ++++ K
Sbjct: 10 KKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 65
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +2
Query: 89 KRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
K+ +K + K ++ KK + KK ++ K KK++KK RR+R
Sbjct: 46 KKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKRKKKKKKKKKRRKRRRR 98
>AK122593-1|BAC56934.1| 229|Homo sapiens FLJ00419 protein protein.
Length = 229
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
R ++REN++ + RE + D E++RR++ E R+R
Sbjct: 77 RERERERENRQRERERERERDRERERRQRERERERERER 115
>M84741-1|AAA52010.1| 690|Homo sapiens cGMP-gated cation channel
protein protein.
Length = 690
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRS 250
++ KK + K D E K D EKK++KK + + ++S
Sbjct: 105 KKKKKKEKKSKSDDKNENKNDPEKKKKKKDKEKKKKEEKS 144
>AC107068-3|AAY40919.1| 690|Homo sapiens unknown protein.
Length = 690
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRS 250
++ KK + K D E K D EKK++KK + + ++S
Sbjct: 105 KKKKKKEKKSKSDDKNENKNDPEKKKKKKDKEKKKKEEKS 144
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 134 RTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
++ K ENK D ++ K D EKK KK +D+++ K
Sbjct: 115 KSDDKNENKNDPEKKKKKKDKEKK--KKEEKSKDKKEEEKK 153
>BC031825-1|AAH31825.1| 560|Homo sapiens TAOK2 protein protein.
Length = 560
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +2
Query: 89 KRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
K +K K+ R KK++ KK ++ K +KK++KK + ++++ K
Sbjct: 505 KSLKKKTNTNKISERNCEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 560
>X98494-1|CAA67120.1| 672|Homo sapiens M phase phosphoprotein 10
protein.
Length = 672
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 137 TTKKRENKKDDLTREMKVDAEKKRRK 214
T KKRE +K + MK+ ++KRRK
Sbjct: 563 TDKKRERRKKKYQKRMKIKEKEKRRK 588
>BC126389-1|AAI26390.1| 681|Homo sapiens M-phase phosphoprotein 10
(U3 small nucleolar ribonucleoprotein) protein.
Length = 681
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 137 TTKKRENKKDDLTREMKVDAEKKRRK 214
T KKRE +K + MK+ ++KRRK
Sbjct: 572 TDKKRERRKKKYQKRMKIKEKEKRRK 597
>BC050594-1|AAH50594.1| 550|Homo sapiens NCOR1 protein protein.
Length = 550
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 134 RTTKKRENKKDDLTREMKVDAEKKRR 211
+T KK E KKD+ ++ K D++KK++
Sbjct: 525 KTEKKEEEKKDEEEKDEKEDSKKKKK 550
>AK131255-1|BAD18434.1| 957|Homo sapiens protein ( Homo sapiens
cDNA FLJ16186 fis, clone BRTHA2007060, moderately
similar to EUKARYOTIC TRANSLATION INITIATION FACTOR 3
SUBUNIT 10. ).
Length = 957
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/53 (26%), Positives = 32/53 (60%)
Frame = +2
Query: 89 KRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
+R QK EA + R ++++ ++++ R+++ AEK+R+++ E +QR
Sbjct: 802 ERQQKLREAEEARKREDAERKKKEEEERLRKLEEIAEKQRQRERELEEKEKQR 854
>L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein.
Length = 530
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
R+ ++ RE KK +RE K K+RR+ + DRR R
Sbjct: 55 RKRSRDRERKKSK-SRERKRSRSKERRRSRSRSRDRRFR 92
>L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein.
Length = 524
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
R+ ++ RE KK +RE K K+RR+ + DRR R
Sbjct: 55 RKRSRDRERKKSK-SRERKRSRSKERRRSRSRSRDRRFR 92
>BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
R+ ++ RE KK +RE K K+RR+ + DRR R
Sbjct: 55 RKRSRDRERKKSK-SRERKRSRSKERRRSRSRSRDRRFR 92
>BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein.
Length = 508
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
R+ ++ RE KK +RE K K+RR+ + DRR R
Sbjct: 55 RKRSRDRERKKSK-SRERKRSRSKERRRSRSRSRDRRFR 92
>AL357374-12|CAI13607.1| 193|Homo sapiens RNA binding motif protein
39 protein.
Length = 193
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
R+ ++ RE KK +RE K K+RR+ + DRR R
Sbjct: 55 RKRSRDRERKKSK-SRERKRSRSKERRRSRSRSRDRRFR 92
>AL357374-11|CAI13608.1| 202|Homo sapiens RNA binding motif protein
39 protein.
Length = 202
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
R+ ++ RE KK +RE K K+RR+ + DRR R
Sbjct: 55 RKRSRDRERKKSK-SRERKRSRSKERRRSRSRSRDRRFR 92
>AL357374-10|CAI13606.1| 231|Homo sapiens RNA binding motif protein
39 protein.
Length = 231
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
R+ ++ RE KK +RE K K+RR+ + DRR R
Sbjct: 55 RKRSRDRERKKSK-SRERKRSRSKERRRSRSRSRDRRFR 92
>AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif protein
39 protein.
Length = 524
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
R+ ++ RE KK +RE K K+RR+ + DRR R
Sbjct: 55 RKRSRDRERKKSK-SRERKRSRSKERRRSRSRSRDRRFR 92
>AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
R+ ++ RE KK +RE K K+RR+ + DRR R
Sbjct: 55 RKRSRDRERKKSK-SRERKRSRSKERRRSRSRSRDRRFR 92
>X13629-1|CAA31955.1| 396|Homo sapiens apolipoprotein A-IV
precursor protein.
Length = 396
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +2
Query: 137 TTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
T +K ++ + LT +MK +AE+ + + +A+ E+ RQR
Sbjct: 230 TQEKLNHQLEGLTFQMKKNAEELKARISASAEELRQR 266
>M14642-1|AAA51745.1| 396|Homo sapiens APOA4 protein.
Length = 396
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +2
Query: 137 TTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
T +K ++ + LT +MK +AE+ + + +A+ E+ RQR
Sbjct: 230 TQEKLNHQLEGLTFQMKKNAEELKARISASAEELRQR 266
>M14566-1|AAA51748.1| 376|Homo sapiens APOA4 protein.
Length = 376
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +2
Query: 137 TTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
T +K ++ + LT +MK +AE+ + + +A+ E+ RQR
Sbjct: 210 TQEKLNHQLEGLTFQMKKNAEELKARISASAEELRQR 246
>M13654-1|AAA51744.1| 396|Homo sapiens APOA4 protein.
Length = 396
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +2
Query: 137 TTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
T +K ++ + LT +MK +AE+ + + +A+ E+ RQR
Sbjct: 230 TQEKLNHQLEGLTFQMKKNAEELKARISASAEELRQR 266
>M10373-1|AAB59516.1| 244|Homo sapiens APOA4 protein.
Length = 244
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +2
Query: 137 TTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
T +K ++ + LT +MK +AE+ + + +A+ E+ RQR
Sbjct: 96 TQEKLNHQLEGLTFQMKKNAEELKARISASAEELRQR 132
>J02758-1|AAA96731.1| 396|Homo sapiens APOA4 protein.
Length = 396
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +2
Query: 137 TTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
T +K ++ + LT +MK +AE+ + + +A+ E+ RQR
Sbjct: 230 TQEKLNHQLEGLTFQMKKNAEELKARISASAEELRQR 266
>BC113596-1|AAI13597.1| 396|Homo sapiens apolipoprotein A-IV
protein.
Length = 396
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +2
Query: 137 TTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
T +K ++ + LT +MK +AE+ + + +A+ E+ RQR
Sbjct: 230 TQEKLNHQLEGLTFQMKKNAEELKARISASAEELRQR 266
>BC113594-1|AAI13595.1| 396|Homo sapiens apolipoprotein A-IV
protein.
Length = 396
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +2
Query: 137 TTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
T +K ++ + LT +MK +AE+ + + +A+ E+ RQR
Sbjct: 230 TQEKLNHQLEGLTFQMKKNAEELKARISASAEELRQR 266
>BC074764-1|AAH74764.1| 396|Homo sapiens apolipoprotein A-IV
protein.
Length = 396
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +2
Query: 137 TTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
T +K ++ + LT +MK +AE+ + + +A+ E+ RQR
Sbjct: 230 TQEKLNHQLEGLTFQMKKNAEELKARISASAEELRQR 266
>AY555191-2|AAS68228.1| 396|Homo sapiens apolipoprotein A-IV
protein.
Length = 396
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +2
Query: 137 TTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
T +K ++ + LT +MK +AE+ + + +A+ E+ RQR
Sbjct: 230 TQEKLNHQLEGLTFQMKKNAEELKARISASAEELRQR 266
>AY422950-1|AAQ91809.1| 396|Homo sapiens apolipoprotein A-IV
protein.
Length = 396
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +2
Query: 137 TTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
T +K ++ + LT +MK +AE+ + + +A+ E+ RQR
Sbjct: 230 TQEKLNHQLEGLTFQMKKNAEELKARISASAEELRQR 266
>AF406992-1|AAL11723.1| 2817|Homo sapiens A-kinase anchoring protein
protein.
Length = 2817
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 119 KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTAN 226
K+ + +K++E +KD + + K +K++ KKT N
Sbjct: 1759 KMSSSKKSKEKEKEKDKIKEKEKDSKDKEKDKKTVN 1794
>AF387101-1|AAL40923.1| 2813|Homo sapiens protein kinase A anchoring
protein Ht31 protein.
Length = 2813
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 119 KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTAN 226
K+ + +K++E +KD + + K +K++ KKT N
Sbjct: 1755 KMSSSKKSKEKEKEKDKIKEKEKDSKDKEKDKKTVN 1790
>AF126008-1|AAD21311.1| 1429|Homo sapiens breast cancer nuclear
receptor-binding auxiliary protein protein.
Length = 1429
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 119 KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTAN 226
K+ + +K++E +KD + + K +K++ KKT N
Sbjct: 371 KMSSSKKSKEKEKEKDKIKEKEKDSKDKEKDKKTVN 406
>AB209414-1|BAD92651.1| 1308|Homo sapiens A-kinase anchor protein 13
isoform 2 variant protein.
Length = 1308
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 119 KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTAN 226
K+ + +K++E +KD + + K +K++ KKT N
Sbjct: 252 KMSSSKKSKEKEKEKDKIKEKEKDSKDKEKDKKTVN 287
>AB055890-1|BAB62913.1| 2813|Homo sapiens guanine nucleotide exchange
factor Lbc protein.
Length = 2813
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 119 KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTAN 226
K+ + +K++E +KD + + K +K++ KKT N
Sbjct: 1755 KMSSSKKSKEKEKEKDKIKEKEKDSKDKEKDKKTVN 1790
>AB033337-1|BAB69456.1| 1820|Homo sapiens mitotic kinesin-related
protein protein.
Length = 1820
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +2
Query: 122 LDVRRTTKKRENKKDDLTREMKVDAEK-----KRRKKTANVEDRRQ 244
+ + KKREN+ D L +E+K +K +R K+ N+ D+++
Sbjct: 732 IKTKEELKKRENESDSLIQELKTSIKKIITQNQRIKELINIIDQKE 777
>BC115737-1|AAI15738.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
RRT +E KDD+ K + K K +ED +++
Sbjct: 28 RRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRLEDDKRK 66
>BC114964-1|AAI14965.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
RRT +E KDD+ K + K K +ED +++
Sbjct: 28 RRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRLEDDKRK 66
>BC090919-1|AAH90919.1| 109|Homo sapiens UPF2 protein protein.
Length = 109
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
RRT +E KDD+ K + K K +ED +++
Sbjct: 28 RRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRLEDDKRK 66
>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
protein protein.
Length = 3567
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 70 NLISIDQKIPKNVGSLKTGREKNN*KEGEQER*FNEGNESRRRKETEKE 216
N++S D +I K+V S K + + E ++ +EG + K+T+K+
Sbjct: 1795 NIVSADCQIMKDVPSYKEAEDISEKPEKPKQEFISEGEGLKEGKDTKKQ 1843
>AY013249-1|AAG48509.1| 1272|Homo sapiens hUPF2 protein.
Length = 1272
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
RRT +E KDD+ K + K K +ED +++
Sbjct: 28 RRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRLEDDKRK 66
>AL645617-1|CAI16755.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
RRT +E KDD+ K + K K +ED +++
Sbjct: 28 RRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRLEDDKRK 66
>AL138898-4|CAH73458.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
RRT +E KDD+ K + K K +ED +++
Sbjct: 28 RRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRLEDDKRK 66
>AF318574-1|AAG60689.1| 1272|Homo sapiens UPF2 protein.
Length = 1272
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
RRT +E KDD+ K + K K +ED +++
Sbjct: 28 RRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRLEDDKRK 66
>AF301013-1|AAG33225.1| 1272|Homo sapiens regulator of nonsense
transcripts 2 protein.
Length = 1272
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
RRT +E KDD+ K + K K +ED +++
Sbjct: 28 RRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRLEDDKRK 66
>AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain
protein 4 protein.
Length = 3599
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 70 NLISIDQKIPKNVGSLKTGREKNN*KEGEQER*FNEGNESRRRKETEKE 216
N++S D +I K+V S K + + E ++ +EG + K+T+K+
Sbjct: 1840 NIVSADCQIMKDVPSYKEAEDISEKPEKPKQEFISEGEGLKEGKDTKKQ 1888
>AB037829-1|BAA92646.1| 1298|Homo sapiens KIAA1408 protein protein.
Length = 1298
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
RRT +E KDD+ K + K K +ED +++
Sbjct: 54 RRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRLEDDKRK 92
>M84739-1|AAA51916.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 128 VRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
V + +K+ K D + +K + E K+RK+ ED+ K
Sbjct: 349 VTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDK 391
>M32294-1|AAA36582.1| 417|Homo sapiens protein ( Human Ro
ribonucleoprotein autoantigen (Ro/SS-A), complete cds.
).
Length = 417
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 128 VRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
V + +K+ K D + +K + E K+RK+ ED+ K
Sbjct: 349 VTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDK 391
>CR457070-1|CAG33351.1| 417|Homo sapiens CALR protein.
Length = 417
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 128 VRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
V + +K+ K D + +K + E K+RK+ ED+ K
Sbjct: 349 VTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDK 391
>BT007448-1|AAP36116.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 128 VRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
V + +K+ K D + +K + E K+RK+ ED+ K
Sbjct: 349 VTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDK 391
>BC026291-1|AAH26291.1| 440|Homo sapiens SLC22A12 protein protein.
Length = 440
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/53 (24%), Positives = 29/53 (54%)
Frame = +2
Query: 98 QKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
++T E K ++ KK++ KK ++ K +KK++KK + ++++ K
Sbjct: 385 KETNEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 437
>BC020493-1|AAH20493.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 128 VRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
V + +K+ K D + +K + E K+RK+ ED+ K
Sbjct: 349 VTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDK 391
>BC017822-1|AAH17822.1| 460|Homo sapiens Unknown (protein for
IMAGE:4690075) protein.
Length = 460
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 101 KTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKK 217
KT + K+ +++T K+ + D++T E K + E+ ++KK
Sbjct: 418 KTMDVSKVKLKKTKKREADLPDNITNE-KTEIEQTKKKK 455
>BC007911-1|AAH07911.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 128 VRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
V + +K+ K D + +K + E K+RK+ ED+ K
Sbjct: 349 VTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDK 391
>BC002500-1|AAH02500.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 128 VRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
V + +K+ K D + +K + E K+RK+ ED+ K
Sbjct: 349 VTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDK 391
>AY047586-1|AAL13126.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 128 VRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
V + +K+ K D + +K + E K+RK+ ED+ K
Sbjct: 349 VTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDK 391
>AD000092-6|AAB51176.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 128 VRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
V + +K+ K D + +K + E K+RK+ ED+ K
Sbjct: 349 VTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDK 391
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,701,305
Number of Sequences: 237096
Number of extensions: 491016
Number of successful extensions: 2969
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 2022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2689
length of database: 76,859,062
effective HSP length: 63
effective length of database: 61,922,014
effective search space used: 1362284308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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