Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_M19
(258 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g41320.1 68418.m05022 expressed protein 34 0.015
At3g28770.1 68416.m03591 expressed protein 31 0.080
At3g43590.1 68416.m04638 zinc knuckle (CCHC-type) family protein... 29 0.42
At5g55350.1 68418.m06897 membrane bound O-acyl transferase (MBOA... 29 0.56
At5g55370.1 68418.m06899 long-chain-alcohol O-fatty-acyltransfer... 28 0.74
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 28 0.74
At1g29570.1 68414.m03616 zinc finger protein-related contains si... 28 0.74
At5g57120.1 68418.m07132 expressed protein weak similarity to SP... 28 0.98
At5g60030.1 68418.m07527 expressed protein 27 1.3
At5g54660.1 68418.m06806 heat shock protein-related contains wea... 27 1.3
At5g53880.1 68418.m06702 expressed protein 27 1.3
At5g08450.2 68418.m00996 expressed protein KED, Nicotiana tabacu... 27 1.3
At5g08450.1 68418.m00995 expressed protein KED, Nicotiana tabacu... 27 1.3
At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein ... 27 1.3
At2g45910.1 68415.m05709 protein kinase family protein / U-box d... 27 1.3
At5g15830.1 68418.m01852 bZIP transcription factor family protei... 27 1.7
At5g10570.1 68418.m01223 basic helix-loop-helix (bHLH) family pr... 27 1.7
At4g29790.1 68417.m04242 expressed protein 27 1.7
At2g42800.1 68415.m05299 leucine-rich repeat family protein cont... 27 1.7
At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /... 27 1.7
At5g60530.1 68418.m07590 late embryogenesis abundant protein-rel... 27 2.3
At5g55380.1 68418.m06900 membrane bound O-acyl transferase (MBOA... 27 2.3
At1g56660.1 68414.m06516 expressed protein 27 2.3
At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar... 27 2.3
At5g62440.1 68418.m07837 expressed protein 26 3.0
At5g17910.1 68418.m02100 expressed protein 26 3.0
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 26 3.0
At5g45260.1 68418.m05555 disease resistance protein (TIR-NBS-LRR... 26 4.0
At5g41030.1 68418.m04987 TCP family transcription factor, putati... 26 4.0
At5g27120.1 68418.m03237 SAR DNA-binding protein, putative stron... 26 4.0
At4g08710.1 68417.m01439 hypothetical protein contains Pfam prof... 26 4.0
At3g52220.1 68416.m05737 expressed protein 26 4.0
At3g16840.1 68416.m02150 DEAD/DEAH box helicase, putative (RH13)... 26 4.0
At3g12860.1 68416.m01603 nucleolar protein Nop56, putative simil... 26 4.0
At2g19390.1 68415.m02262 expressed protein 26 4.0
At1g79140.1 68414.m09228 expressed protein 26 4.0
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 26 4.0
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela... 25 5.2
At5g63150.1 68418.m07929 expressed protein 25 5.2
At5g19300.1 68418.m02300 expressed protein contains Pfam profile... 25 5.2
At4g26630.1 68417.m03837 expressed protein 25 5.2
At1g71160.1 68414.m08211 beta-ketoacyl-CoA synthase family prote... 25 5.2
At4g22730.1 68417.m03279 leucine-rich repeat transmembrane prote... 25 6.9
At3g20550.1 68416.m02601 forkhead-associated domain-containing p... 25 6.9
At3g12640.1 68416.m01573 RNA recognition motif (RRM)-containing ... 25 6.9
At2g34880.1 68415.m04282 transcription factor jumonji (jmj) fami... 25 6.9
At2g28290.2 68415.m03434 chromatin remodeling protein, putative ... 25 6.9
At2g28290.1 68415.m03433 chromatin remodeling protein, putative ... 25 6.9
At1g80930.1 68414.m09495 MIF4G domain-containing protein / MA3 d... 25 6.9
At1g68880.1 68414.m07883 bZIP transcription factor family protei... 25 6.9
At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contai... 25 9.1
At5g54030.1 68418.m06720 DC1 domain-containing protein contains ... 25 9.1
At5g41020.1 68418.m04986 myb family transcription factor contain... 25 9.1
At5g23750.2 68418.m02787 remorin family protein contains Pfam do... 25 9.1
At5g23750.1 68418.m02786 remorin family protein contains Pfam do... 25 9.1
At3g51070.1 68416.m05592 dehydration-responsive protein-related ... 25 9.1
At1g19390.1 68414.m02412 wall-associated kinase, putative simila... 25 9.1
>At5g41320.1 68418.m05022 expressed protein
Length = 515
Score = 33.9 bits (74), Expect = 0.015
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +2
Query: 140 TKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
T+KR +KKD+ T+ KV +KR+ KT VED +++
Sbjct: 63 TRKRRSKKDE-TKPEKVKQVRKRKPKTVCVEDNKKK 97
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 31.5 bits (68), Expect = 0.080
Identities = 14/56 (25%), Positives = 31/56 (55%)
Frame = +2
Query: 89 KRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
K+ ++T E + + ++ KK + K+ + + MK + +KK +KK + R++ K
Sbjct: 1062 KKEEETKEKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEKKKHEESKSRKKEEDK 1117
Score = 28.3 bits (60), Expect = 0.74
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 92 RYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKK 217
R +K +E K + KK + K D RE K D+E+++ KK
Sbjct: 1010 REKKEYEEKKSKTKEEAKKEKKKSQDKKREEK-DSEERKSKK 1050
Score = 24.6 bits (51), Expect = 9.1
Identities = 11/38 (28%), Positives = 25/38 (65%)
Frame = +2
Query: 143 KKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
KK + K+ +++K + E+ R+K+T+ E+++Q+ K
Sbjct: 1192 KKEKEMKESEEKKLKKN-EEDRKKQTSVEENKKQKETK 1228
>At3g43590.1 68416.m04638 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 551
Score = 29.1 bits (62), Expect = 0.42
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 143 KKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
K +EN + D T KK++KK + E++ Q SP+
Sbjct: 394 KNKENSEHDSTPHESNGKTKKKKKKKTHKEEQPQTSPR 431
>At5g55350.1 68418.m06897 membrane bound O-acyl transferase (MBOAT)
family protein / wax synthase-related contains
similarity to wax synthase wax synthase - Simmondsia
chinensis, PID:g5020219 similar to wax synthase
[gi:5020219] from Simmondsia chinensis
Length = 345
Score = 28.7 bits (61), Expect = 0.56
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = -3
Query: 247 SLSSVFNICSLLSPFLFGVYFHFPR*IIFLVLPLFSCSSHVQFSGFPRFLVSF 89
S+S + + + +F + P ++FLVLPLF S H FSG F +S+
Sbjct: 18 SISYCYYTSTRIKSGVFRLLSVLPVCVLFLVLPLFVSSVH--FSGSTAFFLSW 68
>At5g55370.1 68418.m06899 long-chain-alcohol O-fatty-acyltransferase
family protein / wax synthase family protein contains
similarity to wax synthase similarity to wax synthase
wax synthase - Simmondsia chinensis, PID:g5020219
similar to wax synthase [gi:5020219] from Simmondsia
chinensis
Length = 343
Score = 28.3 bits (60), Expect = 0.74
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Frame = -3
Query: 247 SLSSVFNICSLLSPFLFGVYFHFPR*IIFLVLPLFSCSSH---------VQFSGFPRFLV 95
S+S + I S +S + + P IIFL+LPLF S H + F FL
Sbjct: 18 SISYCYYISSKISKGVLRLLSLLPIFIIFLLLPLFFSSVHFCVISGFFFTWLANFKLFLF 77
Query: 94 SFDQY*LS 71
+FDQ LS
Sbjct: 78 AFDQEPLS 85
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 28.3 bits (60), Expect = 0.74
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 125 DVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
D R +K +K+ +RE + ++RR+++ + E RR+R
Sbjct: 433 DARELERKHRERKERESREDEDRRRRRRREESRDKESRRER 473
>At1g29570.1 68414.m03616 zinc finger protein-related contains
similarity to zinc finger proteins (CCCH type)
Length = 321
Score = 28.3 bits (60), Expect = 0.74
Identities = 12/54 (22%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 89 KRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDA-EKKRRKKTANVEDRRQR 247
+ + W + + R ++R +++L + + D+ E++RR+ N++++RQR
Sbjct: 160 RHHDTEWRFERERMERIERQRREAEENLQEQRQRDSIERQRREAEENLQEQRQR 213
>At5g57120.1 68418.m07132 expressed protein weak similarity to
SP|Q14978 Nucleolar phosphoprotein p130 {Homo sapiens}
Length = 330
Score = 27.9 bits (59), Expect = 0.98
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 125 DVRRTTKKRENKKDDLTREMKVD--AEKKRRKKTANV 229
D + +KKR+ + + T+E D E KRRKK NV
Sbjct: 169 DKEKVSKKRKRSEPEETKEETEDDDEESKRRKKEENV 205
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 27.5 bits (58), Expect = 1.3
Identities = 11/42 (26%), Positives = 27/42 (64%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
++ KK++N KD+ + KV + + +K+A+ ++R+++ K
Sbjct: 150 KKEKKKKKNNKDEDVVDEKVKEKLEDEQKSADRKERKKKKSK 191
>At5g54660.1 68418.m06806 heat shock protein-related contains weak
similarity to 17.6 kDa class I heat shock protein (HSP
17.6) (Swiss-Prot:P13853) [Arabidopsis thaliana]
Length = 192
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3
Query: 247 SLSSVFNICSLLSPFLFGVYF 185
S +VF SL SPFLFG YF
Sbjct: 41 SEKAVFGEGSLFSPFLFGKYF 61
>At5g53880.1 68418.m06702 expressed protein
Length = 66
Score = 27.5 bits (58), Expect = 1.3
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +2
Query: 143 KKRENKKDDLTREMKVDAEKKRRKKT 220
KK+E KK+++ +E K + +K+ +K+T
Sbjct: 35 KKKEVKKEEIKKEEKKEEKKEEKKET 60
>At5g08450.2 68418.m00996 expressed protein KED, Nicotiana tabacum,
EMBL:AB009883
Length = 918
Score = 27.5 bits (58), Expect = 1.3
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 89 KRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKK 205
+R WE +++ + + +E KD + RE + AEK+
Sbjct: 398 ERESDRWERERMEQKDRERNKEKDKDHIKREPRTGAEKE 436
>At5g08450.1 68418.m00995 expressed protein KED, Nicotiana tabacum,
EMBL:AB009883
Length = 918
Score = 27.5 bits (58), Expect = 1.3
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 89 KRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKK 205
+R WE +++ + + +E KD + RE + AEK+
Sbjct: 398 ERESDRWERERMEQKDRERNKEKDKDHIKREPRTGAEKE 436
>At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein
NAP57, putative similar to SP|P40615 Dyskerin (Nucleolar
protein NAP57) {Rattus norvegicus}; contains Pfam
profiles PF01509: TruB family pseudouridylate synthase
(N terminal domain), PF01472: PUA domain; supporting
cDNA gi|8901185|gb|AF234984.2|AF234984
Length = 565
Score = 27.5 bits (58), Expect = 1.3
Identities = 11/35 (31%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREM-KVDAEKKRRKKTANVE 232
++ KK+++KK+++ E+ +EKK++KK+ + E
Sbjct: 496 KKEKKKKKDKKEEVIEEVASPKSEKKKKKKSKDTE 530
Score = 24.6 bits (51), Expect = 9.1
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = +2
Query: 134 RTTKKRENKKDDLTREMKVDAEKKRRKK 217
+++KK++ K + +E + +EKK +KK
Sbjct: 474 KSSKKKKKKDKEEEKEEEAGSEKKEKKK 501
>At2g45910.1 68415.m05709 protein kinase family protein / U-box
domain-containing protein contains Pfam profiles PF00069
Eukaryotic protein kinase domain, PF04564: U-box
domain; supported by tandem duplication of (GI:3386604)
(TIGR_Ath1:At2g45920) [Arabidopsis thaliana]
Length = 834
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 28 KKKLIRNHKMTTDGNLISIDQKIPKNVGSLKTGREKNN*KEGEQER*FNEGNESRRRKET 207
+K ++ + +DG + ++QK+ V L+ R++ + E++R E E R ET
Sbjct: 398 QKAMLESQIAKSDGTMEKLNQKLDIAVKLLQKLRDEREELQTERDRALREAEELRSHAET 457
>At5g15830.1 68418.m01852 bZIP transcription factor family protein
similar to common plant regulatory factor 7 GI:9650828
from [Petroselinum crispum]; contains Pfam profile:
PF00170 bZIP transcription factor
Length = 186
Score = 27.1 bits (57), Expect = 1.7
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 119 KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVED-RRQRSPK 256
+L+++ DD T E+ V E+K+R+ +N E RR R K
Sbjct: 47 ELNLQSPVSNNSTTSDDATEEIFVINERKQRRMVSNRESARRSRMRK 93
>At5g10570.1 68418.m01223 basic helix-loop-helix (bHLH) family
protein bHLH transcription factor, Arabidopsis thaliana,
EMBL:AC005167
Length = 315
Score = 27.1 bits (57), Expect = 1.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 122 LDVRRTTKKRENKKDDLTREMKVDAEKKRRKK 217
+ + T KKR NKK + + AE++RRK+
Sbjct: 131 ISIGETNKKRSNKKLEGQPSKNLMAERRRRKR 162
>At4g29790.1 68417.m04242 expressed protein
Length = 1211
Score = 27.1 bits (57), Expect = 1.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 82 IDQKIPKNVGSLKTGREKNN*KEGEQER*FNEGN 183
I IP+ + LK G +NN K E+ + FNE +
Sbjct: 111 IPSPIPEEIKRLKAGLRENNVKARERLKIFNEAS 144
>At2g42800.1 68415.m05299 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; and grail
Length = 462
Score = 27.1 bits (57), Expect = 1.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 241 SSVFNICSLLSPFLFGVYFHFPR*IIF 161
SS+F + L S F F + HFP I+F
Sbjct: 106 SSIFTLPFLQSVFFFNCFTHFPTTIMF 132
>At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
SEC14-like protein 2 (Alpha-tocopherol associated
protein) (TAP) (bTAP) (Fragment) (SP:P58875) {Bos
taurus}; similar to GI:807956 from [Saccharomyces
cerevisiae]; contains Pfam PF00650 : CRAL/TRIO domain;
contains Pfam PF03765 : CRAL/TRIO, N-terminus
Length = 573
Score = 27.1 bits (57), Expect = 1.7
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 98 QKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEK 202
+KT E + + +K E KK++ T E+KV+ EK
Sbjct: 123 EKTEEKKTEEETKEEEKTEEKKEETTTEVKVEEEK 157
>At5g60530.1 68418.m07590 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 439
Score = 26.6 bits (56), Expect = 2.3
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 101 KTWEA*KLDVRRTTK-KRENKKDDLTREMKVDAEKKRRKKTANVEDRRQ 244
K E K D + K K+E +K D + K D E+K ++K +E ++
Sbjct: 59 KDKEQEKKDKEKAAKDKKEKEKKDKEEKEKKDKERKEKEKKDKLEKEKK 107
>At5g55380.1 68418.m06900 membrane bound O-acyl transferase (MBOAT)
family protein / wax synthase-related similar to wax
synthase [gi:5020219] from Simmondsia chinensis
Length = 341
Score = 26.6 bits (56), Expect = 2.3
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -3
Query: 247 SLSSVFNICSLLSPFLFGVYFHFPR*IIFLVLPLF-SC 137
SLS + I S LS + + P I+FLVLPLF SC
Sbjct: 18 SLSYCYYISSKLSKGVLRLLSILPVCILFLVLPLFLSC 55
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 26.6 bits (56), Expect = 2.3
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = +2
Query: 125 DVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
D ++ KK +++ ++ K D EKK + ++ ED++ + K
Sbjct: 246 DSKKNKKKEKDESCAEEKKKKPDKEKKEKDESTEKEDKKLKGKK 289
Score = 25.4 bits (53), Expect = 5.2
Identities = 10/44 (22%), Positives = 26/44 (59%)
Frame = +2
Query: 125 DVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
D ++ KK +++ ++ K EKK+++++ + ED++ + K
Sbjct: 173 DGKKNKKKEKDESGTEEKKKKPKKEKKQKEESKSNEDKKVKGKK 216
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +2
Query: 119 KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
K D+ + ++++ + D+ +EMK KK +KK + ++ K
Sbjct: 221 KGDLEKEDEEKKKEHDETDQEMKEKDSKKNKKKEKDESCAEEKKKK 266
>At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar to
RNA helicase [Rattus norvegicus] GI:897915; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain
Length = 1166
Score = 26.6 bits (56), Expect = 2.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 118 KTGREKNN*KEGEQER*FNEGNESRRRKETEKEDCK 225
K RE+ K+ E+ER + R R+E EKE K
Sbjct: 135 KRDREREERKDKEREREKDRERREREREEREKERVK 170
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQR 247
R++ + KK+ TRE +++ E+K K VE RR+R
Sbjct: 249 RKSVEDNGEKKEKKTREEELEDEQK--KLDEEVEKRRRR 285
>At5g62440.1 68418.m07837 expressed protein
Length = 202
Score = 26.2 bits (55), Expect = 3.0
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 82 IDQKIPKNVGSLKTGREKNN*KEGEQER*FNEGNESRRRKETEKE 216
+D ++ +TG EK +E E+E G ES+++K E+E
Sbjct: 21 VDMEVETATPKAETGDEKREREETEEE---ENGGESKKQKVGEEE 62
>At5g17910.1 68418.m02100 expressed protein
Length = 1342
Score = 26.2 bits (55), Expect = 3.0
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 79 SIDQKIPKNVGSLKTGREKNN*KEGEQER*FNEGNESRRRKETEKED 219
S D+ + + S G E +N E E+E E E ++ K+ +K+D
Sbjct: 303 SSDEGMESDGDSESHGEEGDNENEDEEEDEEEEDEEEKQEKKEDKDD 349
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 26.2 bits (55), Expect = 3.0
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDA--EKKRRKKTANVEDRRQRSP 253
R+ +KR +KKD R + D EKKR + + + +RSP
Sbjct: 243 RQKKRKRSSKKDKHRRSKQRDKRHEKKRSMRDKRPKRKSRRSP 285
>At5g45260.1 68418.m05555 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1187
Score = 25.8 bits (54), Expect = 4.0
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 157 VLPLFSCSSHVQFSGFPRFL 98
VL L CSS GFPRFL
Sbjct: 750 VLDLSGCSSLNSIQGFPRFL 769
>At5g41030.1 68418.m04987 TCP family transcription factor, putative
similar to PCF1 (GI:2580438) and PCF2 [(GI:2580440)
Oryza sativa] ; similar to unknown protein
(emb|CAB61988.1)
Length = 243
Score = 25.8 bits (54), Expect = 4.0
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 89 KRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTAN--VEDRRQR 247
KR Q + + V KK+EN+++D ++ + EKK+ K + VE R +R
Sbjct: 27 KRKQTEVKGFDIVVGEKRKKKENEEEDQEIQILYEKEKKKPNKDRHLKVEGRGRR 81
>At5g27120.1 68418.m03237 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 533
Score = 25.8 bits (54), Expect = 4.0
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = +2
Query: 131 RRTTKKRENKKDDLTREMKVDAEKKRRKKT 220
++ +K E ++ ++ + K +EKK++KKT
Sbjct: 502 KKKKRKHEEEETEMPAKKKEKSEKKKKKKT 531
>At4g08710.1 68417.m01439 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 715
Score = 25.8 bits (54), Expect = 4.0
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 79 SIDQKIPKNVGSLKTGREKNN*KEGEQER*FNEGNESRRRKETEKE 216
S+ ++ P+NV ++ E+ +E E+E EG E +E E+E
Sbjct: 73 SLTEQDPENVEEEESEEEEKEEEEKEEEE-EEEGEEEEEEEEEEEE 117
>At3g52220.1 68416.m05737 expressed protein
Length = 237
Score = 25.8 bits (54), Expect = 4.0
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 143 KKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
K E+ DD+ R+ K D ++R+ E+R R K
Sbjct: 166 KTVEDGPDDVERDQKKDRREERKPAKREKEERHDRREK 203
>At3g16840.1 68416.m02150 DEAD/DEAH box helicase, putative (RH13)
similar to RNA helicase GB:CAA09204 from [Arabidopsis
thaliana]; identical to cDNA DEAD box RNA helicase, RH13
GI:3776002
Length = 832
Score = 25.8 bits (54), Expect = 4.0
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 140 TKKRENKKDDLTREMKVDAEKKRRKK 217
T+K++ KK +E K + +KK++KK
Sbjct: 130 TRKKKEKKAKRNKEKKKEKKKKKQKK 155
>At3g12860.1 68416.m01603 nucleolar protein Nop56, putative similar
to XNop56 protein [Xenopus laevis] GI:14799394; contains
Pfam profile PF01798: Putative snoRNA binding domain
Length = 499
Score = 25.8 bits (54), Expect = 4.0
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 128 VRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVE 232
V + KK++ K ++ E + + KK++KK+ VE
Sbjct: 441 VDASEKKKKRKTEEKEEEKEEEKSKKKKKKSKAVE 475
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +2
Query: 122 LDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQRSPK 256
+DV + + KKD+ + + +KK+RK E++ + K
Sbjct: 421 VDVMKEVLENLEKKDEGEKTVDASEKKKKRKTEEKEEEKEEEKSK 465
>At2g19390.1 68415.m02262 expressed protein
Length = 1211
Score = 25.8 bits (54), Expect = 4.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 82 IDQKIPKNVGSLKTGREKNN*KEGEQER*FNEGN 183
I IP+ + K G +NN K E+ + FNE +
Sbjct: 110 IPSPIPEEIKRFKAGLRENNVKARERVKIFNEAS 143
>At1g79140.1 68414.m09228 expressed protein
Length = 311
Score = 25.8 bits (54), Expect = 4.0
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 149 RENKKDDLTR-EMKVDAEKKRRKKTANVEDRRQRSPK 256
R+ K+D+ R E+ EKK KK NV ++ ++PK
Sbjct: 270 RDIKEDERVRMELLQSEEKKPLKKQNNVVKKKLKNPK 306
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 25.8 bits (54), Expect = 4.0
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = +1
Query: 85 DQKIPKNVG----SLKTGREKNN*KEGEQER*FNEGNESRRRKETEKEDCKC*RQKTAI 249
++K+PK+V +L +E + K+ E+E + E RR +E + + + RQK I
Sbjct: 215 EKKVPKHVREKQETLARWKEAEDGKKKEEEERLRKEEEERRIEEEREREAEEIRQKRKI 273
>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
low similarity to nuclear matrix constituent protein 1
(NMCP1) [Daucus carota] GI:2190187
Length = 1042
Score = 25.4 bits (53), Expect = 5.2
Identities = 13/57 (22%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +2
Query: 80 VLIKRYQKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEKKR--RKKTANVEDRRQ 244
V I+ ++ WE ++D+++ K+ DL + + AEK++ +K+ N++++ +
Sbjct: 406 VEIESKRRAWELREVDIKQREDLVGEKEHDLEVQSRALAEKEKDITEKSFNLDEKEK 462
>At5g63150.1 68418.m07929 expressed protein
Length = 138
Score = 25.4 bits (53), Expect = 5.2
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 122 LDVRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRRQ 244
LD+ T E ++D + D+ KK+RKK N R+
Sbjct: 89 LDLAETASLEEEEEDTKEIVIYADSVKKKRKKKMNKHKYRK 129
>At5g19300.1 68418.m02300 expressed protein contains Pfam profile
PF02598: Uncharacterized ACR, COG2106
Length = 398
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 143 KKRENKKDDLTREMKVDAEKKRRKKTANVEDRR 241
KKR+NK + E+ + K + ++ NVE+ R
Sbjct: 65 KKRKNKNQEEEPELVTEKTKVQEEEKGNVEEGR 97
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 145 KEGEQER*FNEGNESRRRKETEKED 219
KEG ++ NE ES+ KE EKE+
Sbjct: 244 KEGSEDENDNEKVESKDAKEDEKEE 268
>At1g71160.1 68414.m08211 beta-ketoacyl-CoA synthase family protein
similar to fatty acid elongase 3-ketoacyl-CoA synthase 1
GB:AAC99312, very-long-chain fatty acid condensing
enzyme CUT1 [GI:5001734]
Length = 460
Score = 25.4 bits (53), Expect = 5.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 235 VFNICSLLSPFLFGVYFHFPR*IIFLVLPLFSCSSHVQFSGFP 107
V + C L++ +FG YF PR II+L+ FSC F P
Sbjct: 26 VASACVLIA--VFGYYFFKPRCIIYLI--DFSCYQPPDFLRAP 64
>At4g22730.1 68417.m03279 leucine-rich repeat transmembrane protein
kinase, putative leucine rich repeat receptor-like
kinase, Oryza sativa, PATCHX:E267533
Length = 688
Score = 25.0 bits (52), Expect = 6.9
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 79 SIDQKIPKNVGSLK 120
S+ KIPKN+GSLK
Sbjct: 151 SLTGKIPKNIGSLK 164
>At3g20550.1 68416.m02601 forkhead-associated domain-containing
protein / FHA domain-containing protein weak similarity
to SP|Q28147 Nuclear inhibitor of protein phosphatase-1
(NIPP-1) (Protein phosphatase 1, regulatory inhibitor
subunit 8) {Bos taurus}; contains Pfam profile PF00498:
FHA domain
Length = 314
Score = 25.0 bits (52), Expect = 6.9
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +1
Query: 124 GREKNN*KEGEQER*FNEGNESRR--RKETEK 213
GR+++ ++GE ER G++ RR R++TEK
Sbjct: 50 GRDRDRERKGEGERDREVGDKRRRSGREDTEK 81
>At3g12640.1 68416.m01573 RNA recognition motif (RRM)-containing
protein contains InterPro entry IPR000504: RNA-binding
region RNP-1 (RNA recognition motif) (RRM)
Length = 674
Score = 25.0 bits (52), Expect = 6.9
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 33 KTNKES*DDNRRKLN*Y*SKDTKKRGKPENWT*EEQLKRGRT 158
+TNKE+ D R+L + +D +P N + E LKR R+
Sbjct: 206 ETNKEAKPDVSRRLLQFAVRDALAISRPANSSTESSLKRLRS 247
>At2g34880.1 68415.m04282 transcription factor jumonji (jmj) family
protein / zinc finger (C5HC2 type) family protein
contains Pfam domains, PF02375: jmjN domain, PF02373:
jmjC domain and PF02928: C5HC2 zinc finger
Length = 806
Score = 25.0 bits (52), Expect = 6.9
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 98 QKTWEA*KLDVRRTTKKRENKKDDLTREMKVDAEK 202
QK WE L V+ +R N+K D+ +D K
Sbjct: 712 QKCWEMVLLRVKEEIMRRSNQKQDVHMLESIDGLK 746
>At2g28290.2 68415.m03434 chromatin remodeling protein, putative (SYD)
similar to transcriptional activator HBRM [Homo sapiens]
GI:414117; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain; identical to cDNA putative chromatin
remodeling protein SYD (SPLAYED) GI:13603720
Length = 3529
Score = 25.0 bits (52), Expect = 6.9
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 153 RTRKMI*RGK*K*TPKRNGERRLQMLKTEDSDRRR 257
R R + RG+ TPKR G+RR Q L D+ R
Sbjct: 1770 RVRNLPSRGE---TPKRQGKRRGQPLPATDASSAR 1801
>At2g28290.1 68415.m03433 chromatin remodeling protein, putative (SYD)
similar to transcriptional activator HBRM [Homo sapiens]
GI:414117; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain; identical to cDNA putative chromatin
remodeling protein SYD (SPLAYED) GI:13603720
Length = 3574
Score = 25.0 bits (52), Expect = 6.9
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 153 RTRKMI*RGK*K*TPKRNGERRLQMLKTEDSDRRR 257
R R + RG+ TPKR G+RR Q L D+ R
Sbjct: 1770 RVRNLPSRGE---TPKRQGKRRGQPLPATDASSAR 1801
>At1g80930.1 68414.m09495 MIF4G domain-containing protein / MA3
domain-containing protein similar to SP|Q9P6R9 Cell
cycle control protein cwf22 {Schizosaccharomyces pombe};
contains Pfam profiles PF02854: MIF4G domain, PF02847:
MA3 domain
Length = 900
Score = 25.0 bits (52), Expect = 6.9
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +2
Query: 128 VRRTTKKRENKKDDLTREMKVDAEKKRRKKTANVEDRR 241
VRR ++R + D+ R + RR + ++ EDR+
Sbjct: 14 VRRRDRRRRERSPDVRRSRTETDDVARRVRVSDDEDRK 51
>At1g68880.1 68414.m07883 bZIP transcription factor family protein
similar to common plant regulatory factor 6 GI:9650826
from [Petroselinum crispum]; contains Pfam profile:
PF00170 bZIP transcription factor
Length = 138
Score = 25.0 bits (52), Expect = 6.9
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 164 DDLTREMKVDAEKKRRKKTANVED-RRQRSPK 256
DD +R + D E+KRR+K +N E RR R K
Sbjct: 36 DDSSRTAE-DNERKRRRKVSNRESARRSRMRK 66
>At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contains
Pfam profiles PF00270:DEAD/DEAH box helicase and
PF00271: Helicase conserved C-terminal domain;
identical to cDNA RH27 helicase, partial GI:4033334
Length = 633
Score = 24.6 bits (51), Expect = 9.1
Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 25 RKKKLIRNHKM--TTDGNLISIDQKIPKNVGSLKTGREKNN*KEGEQER*FNEGNESRRR 198
+KKK +N K T DG ++ ++ PK ++ E++ E E +++
Sbjct: 60 KKKKKKKNKKRGDTDDGEDEAVAEEEPKKKKKKNKKLQQRGDTNDEEDEVIAEEEEPKKK 119
Query: 199 KETEKED 219
K+ +++D
Sbjct: 120 KKKQRKD 126
>At5g54030.1 68418.m06720 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 419
Score = 24.6 bits (51), Expect = 9.1
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 25 RKKKLIRNHKMTTDGNLISID 87
+K+ L+ NHK+T LI+ D
Sbjct: 332 KKRHLLHNHKLTLSSTLINKD 352
>At5g41020.1 68418.m04986 myb family transcription factor contains
Pfam profile: PF00249 Myb DNA binding domain
Length = 588
Score = 24.6 bits (51), Expect = 9.1
Identities = 11/44 (25%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +2
Query: 131 RRTTKKRENKKDDL--TREMKVDAEKKRRKKTANVEDRRQRSPK 256
++ ++ E +++ L T++ K +KK++KK + V + ++S K
Sbjct: 217 KKQSEDSETEENGLNSTKDAKKRRKKKKKKKQSEVSEAEEKSDK 260
>At5g23750.2 68418.m02787 remorin family protein contains Pfam
domain, PF03766: Remorin, N-terminal region; contains
Pfam domain, PF03763: Remorin, C-terminal region
Length = 201
Score = 24.6 bits (51), Expect = 9.1
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Frame = +2
Query: 5 EDKKHNFVRKN**GIIR*QQTET*LVLIKRYQKTWEA*KLDVRRTTKKR--------ENK 160
E+KK V ++ ++ +TE + LIK ++ EA K V +K+ NK
Sbjct: 71 EEKKEGSVNRD--AVLARVETEKRMSLIKAWE---EAEKCKVENKAEKKLSSIGSWENNK 125
Query: 161 KDDLTREMKVDAEKKRRKKTANVEDRRQR 247
K + E+K E+ +KK VE + +
Sbjct: 126 KAAVEAELKKMEEQLEKKKAEYVEQMKNK 154
>At5g23750.1 68418.m02786 remorin family protein contains Pfam
domain, PF03766: Remorin, N-terminal region; contains
Pfam domain, PF03763: Remorin, C-terminal region
Length = 202
Score = 24.6 bits (51), Expect = 9.1
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Frame = +2
Query: 5 EDKKHNFVRKN**GIIR*QQTET*LVLIKRYQKTWEA*KLDVRRTTKKR--------ENK 160
E+KK V ++ ++ +TE + LIK ++ EA K V +K+ NK
Sbjct: 72 EEKKEGSVNRD--AVLARVETEKRMSLIKAWE---EAEKCKVENKAEKKLSSIGSWENNK 126
Query: 161 KDDLTREMKVDAEKKRRKKTANVEDRRQR 247
K + E+K E+ +KK VE + +
Sbjct: 127 KAAVEAELKKMEEQLEKKKAEYVEQMKNK 155
>At3g51070.1 68416.m05592 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 895
Score = 24.6 bits (51), Expect = 9.1
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +1
Query: 13 KTQFRKKKLIRNHKMTTDGNLISIDQKIPKNVGSLKTGREKNN*KEGEQER*FNEGNESR 192
K++ ++K + TT + + + N + +EK+N KE + + EG +
Sbjct: 100 KSEDEQRKSAKEKSETTSSKTQTQETQ-QNNDDKISEEKEKDNGKENQTVQESEEGQMKK 158
Query: 193 RRKETEKE 216
KE EKE
Sbjct: 159 VVKEFEKE 166
>At1g19390.1 68414.m02412 wall-associated kinase, putative similar
to GB:CAB42872 from [Arabidopsis thaliana] (Plant Mol.
Biol. 39 (6), 1189-1196 (1999))
Length = 788
Score = 24.6 bits (51), Expect = 9.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 69 SVCCHLMIPY*FFLTKLCFLS 7
SVC ++ IPY F + K C+L+
Sbjct: 36 SVCGNINIPYPFGIEKGCYLN 56
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,910,930
Number of Sequences: 28952
Number of extensions: 85638
Number of successful extensions: 533
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of database: 12,070,560
effective HSP length: 64
effective length of database: 10,217,632
effective search space used: 214570272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -