Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M18
         (526 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           25   0.54 
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   5.0  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   5.0  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   6.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   6.7  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.8  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   8.8  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +2

Query: 383 PARMATPVVSVPGSSLT 433
           PA +A+P+V  PGSS T
Sbjct: 92  PAPLASPLVQEPGSSTT 108


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 340 VDPRGSASFSLHGRHTRNACQHRKVHH 260
           +DPR ++   + G  T + CQ   V H
Sbjct: 22  LDPRLNSKIQVSGASTTDECQVTPVIH 48


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -2

Query: 507 LNRKILDPGRIQHNTYPMSHGLRWQVRLEPG 415
           L   ++ PG+     Y   H    QV L PG
Sbjct: 97  LKHAVVHPGQSPAEKYDQQHLYHPQVLLSPG 127


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 428 DLNLARTPPELPCGR 384
           DL++  TPP L C +
Sbjct: 54  DLDVTGTPPPLDCSK 68


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = -1

Query: 418 WHGHHR 401
           WHGHH+
Sbjct: 135 WHGHHQ 140


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 339 WTPGDRRPFLCTVDIHA 289
           +TP D  P LCT  I+A
Sbjct: 541 FTPEDINPSLCTHIIYA 557


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 332 PGIGVLFFAR*TY 294
           PG+GV ++AR  Y
Sbjct: 279 PGVGVFWYARLLY 291


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,328
Number of Sequences: 336
Number of extensions: 2728
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)