Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M18
         (526 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    25   1.6  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     23   6.3  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    23   8.3  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 17/64 (26%), Positives = 30/64 (46%)
 Frame = +3

Query: 159  QALRQSCIHRLQTWSAQPT*KYSFVKD*RYKGSQ*CTFLCWQALRVCLPCKEKDADPRGS 338
            QAL  S IH+L+++  +   ++   +   YK     + L        L C  K  D +G+
Sbjct: 891  QALCISQIHQLRSYFVESQNRHELYRT-VYKADHGLSALHLAQQDYQLNCNIKTVDGKGA 949

Query: 339  TWQE 350
            TW++
Sbjct: 950  TWKQ 953


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 388 PHGNSGGVRARFKSNLPAQAMGHRIRVMLYPS 483
           P GN       + +  P  A+   I+ M YPS
Sbjct: 149 PWGNDSAADYAYHAQYPPYALATDIKPMYYPS 180


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 406 GVRARFKSNLPAQAMGHRIRVMLYPS 483
           G+  +  SNLP  +  HR++  + P+
Sbjct: 445 GILPKHASNLPDVSFVHRVQTCIIPA 470


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 560,660
Number of Sequences: 2352
Number of extensions: 12729
Number of successful extensions: 34
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48205926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)