Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M17
         (353 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4M7Y2 Cluster: D-alanine--D-alanine ligase; n=1; Petro...    33   1.1  
UniRef50_A5K156 Cluster: Putative uncharacterized protein; n=1; ...    33   1.1  
UniRef50_UPI00006CBD42 Cluster: Adaptin C-terminal domain contai...    33   1.9  

>UniRef50_A4M7Y2 Cluster: D-alanine--D-alanine ligase; n=1;
           Petrotoga mobilis SJ95|Rep: D-alanine--D-alanine ligase
           - Petrotoga mobilis SJ95
          Length = 298

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = +3

Query: 12  EKYI-YCLYIMFISTPSRNARH--LSAKFHIRVIVKPRVTGSR*AGYYCILKKNAYYFYK 182
           +K+I Y L+  +I  P     +  +   F    I+KPR +GS   G Y I  +N Y FY 
Sbjct: 93  DKFIFYSLFKNYIQMPQTTLTNKLILPPFEYPFIIKPRKSGSS-KGVYIIHNENEYKFYL 151

Query: 183 KKEPDRF 203
           +K+   F
Sbjct: 152 EKDLKEF 158


>UniRef50_A5K156 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1007

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 150 ILKKNAYYFYKKKEPDRFSCRLFSTGLLFEPVVVSVFDIHKRLL 281
           +  K  Y+F K+K    F    F TG+++   V+  F I K++L
Sbjct: 807 VTNKKEYFFVKRKNRHAFFSVAFDTGVMYNNQVLKFFQIKKKIL 850


>UniRef50_UPI00006CBD42 Cluster: Adaptin C-terminal domain
           containing protein; n=1; Tetrahymena thermophila
           SB210|Rep: Adaptin C-terminal domain containing protein
           - Tetrahymena thermophila SB210
          Length = 1229

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 17/43 (39%), Positives = 27/43 (62%)
 Frame = -2

Query: 325 QINQLKENRYSI*PLRRRL*MSKTLTTTGSKSNPVEKSRQENR 197
           +INQL+E  ++I  L+ ++   +TL     KSNPV+ + QE R
Sbjct: 699 KINQLQEENHNIPILQTKINELETLINQQQKSNPVKSADQEMR 741


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 301,786,225
Number of Sequences: 1657284
Number of extensions: 4896740
Number of successful extensions: 10597
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10595
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11514999177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)