Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M17
         (353 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   3.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   8.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    20   8.6  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -1

Query: 95  NVKFRAQMPRITRRSAYKHNVKTI 24
           N+K+R  +   TRR A+ ++  T+
Sbjct: 119 NIKYRNLLETTTRRLAFVNSAYTL 142


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -1

Query: 296 FNLAPKKALMNVKNTNY 246
           FNL P K  + V N  Y
Sbjct: 638 FNLPPSKDTIAVPNNGY 654


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = -3

Query: 138 PLSATP*RAVSL*RECEISRSNASHYAKECL 46
           P  ATP R V       I R     YA+E L
Sbjct: 16  PYDATPARIVCYFSNWAIYRPGIGRYAQEDL 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,284
Number of Sequences: 336
Number of extensions: 1412
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7087595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)