Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M17
         (353 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC047574-1|AAH47574.1|  899|Homo sapiens WDFY4 protein protein.        29   3.1  
AK074085-1|BAB84911.1| 1887|Homo sapiens FLJ00156 protein protein.     29   3.1  
AB046827-1|BAB13433.1| 1270|Homo sapiens KIAA1607 protein protein.     29   3.1  

>BC047574-1|AAH47574.1|  899|Homo sapiens WDFY4 protein protein.
          Length = 899

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -3

Query: 270 YECQKH*LPPVRKATQLRRADKKIDLVLFFYKNNKHFFLIYSN 142
           Y CQ H    +R+  Q R   + I L +FF+     F + Y+N
Sbjct: 173 YSCQCHSYADMRELRQARFLLQDIALEIFFHNGYSKFLVFYNN 215


>AK074085-1|BAB84911.1| 1887|Homo sapiens FLJ00156 protein protein.
          Length = 1887

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -3

Query: 270  YECQKH*LPPVRKATQLRRADKKIDLVLFFYKNNKHFFLIYSN 142
            Y CQ H    +R+  Q R   + I L +FF+     F + Y+N
Sbjct: 1169 YSCQCHSYADMRELRQARFLLQDIALEIFFHNGYSKFLVFYNN 1211


>AB046827-1|BAB13433.1| 1270|Homo sapiens KIAA1607 protein protein.
          Length = 1270

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -3

Query: 270 YECQKH*LPPVRKATQLRRADKKIDLVLFFYKNNKHFFLIYSN 142
           Y CQ H    +R+  Q R   + I L +FF+     F + Y+N
Sbjct: 544 YSCQCHSYADMRELRQARFLLQDIALEIFFHNGYSKFLVFYNN 586


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,577,202
Number of Sequences: 237096
Number of extensions: 715551
Number of successful extensions: 1029
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2075554296
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)