Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_M15
(311 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding... 87 2e-18
Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical pr... 86 6e-18
AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding... 79 9e-16
AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding... 74 2e-14
Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical pr... 73 3e-14
AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding... 71 2e-13
U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding p... 40 4e-04
U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding p... 38 0.001
U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding p... 38 0.001
U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding p... 34 0.018
U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding p... 33 0.042
Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical pr... 29 0.68
AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical... 28 1.2
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z79752-4|CAB02083.1| 1188|Caenorhabditis elegans Hypothetical pr... 27 2.1
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 27 2.1
Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical p... 27 3.6
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 27 3.6
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 27 3.6
AF318614-1|AAK01102.1| 433|Caenorhabditis elegans ionotropic gl... 27 3.6
Z92804-2|CAB07253.2| 321|Caenorhabditis elegans Hypothetical pr... 26 6.4
Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical pr... 25 8.4
>AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding
protein protein 6 protein.
Length = 135
Score = 87.0 bits (206), Expect = 2e-18
Identities = 42/85 (49%), Positives = 61/85 (71%)
Frame = +1
Query: 49 LAMDFIGKKYKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFK 228
++ +F+G+ +K+ SENF+++MK +GVGLITRKAA + PT+E++ EGD + STFK
Sbjct: 1 MSQEFVGR-WKLIHSENFEEYMKEVGVGLITRKAAANLKPTLEIKVEGDLWYSNQYSTFK 59
Query: 229 TTEMKFKPGEEFEEERADGVKVKSV 303
T + FK G+EF+E DG VKSV
Sbjct: 60 NTTLSFKLGQEFDETTPDGRTVKSV 84
>Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical
protein T22G5.2 protein.
Length = 137
Score = 85.8 bits (203), Expect = 6e-18
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = +1
Query: 58 DFIGKKYKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTE 237
DFIG+ +K+ +ENFD++MK +GVGLITRKAA + P +E+R +G+ +NF STFK T+
Sbjct: 6 DFIGR-WKLVQTENFDEYMKEIGVGLITRKAAAHLKPILEIRLDGETWNFDQFSTFKNTK 64
Query: 238 MKFKPGEEFEEERAD 282
+ FK GEEF E D
Sbjct: 65 LSFKLGEEFVENSPD 79
>AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding
protein protein 5 protein.
Length = 136
Score = 78.6 bits (185), Expect = 9e-16
Identities = 38/86 (44%), Positives = 58/86 (67%)
Frame = +1
Query: 52 AMDFIGKKYKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKT 231
A F+G+ +K+ SENF+D++K +GVGL+ RKAA A PT+E++ G++++ STFK
Sbjct: 3 AEQFVGR-WKLVESENFEDYLKEVGVGLLLRKAACAAKPTLEIKVNGNKWHVNQLSTFKN 61
Query: 232 TEMKFKPGEEFEEERADGVKVKSV*T 309
T ++F G EF+E DG + KS T
Sbjct: 62 TTLEFTLGVEFDETTPDGRQFKSTIT 87
>AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding
protein protein 9,isoform a protein.
Length = 152
Score = 73.7 bits (173), Expect = 2e-14
Identities = 35/89 (39%), Positives = 53/89 (59%)
Frame = +1
Query: 37 KNLPLAMDFIGKKYKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTS 216
+N+P+ D +GK + +SENFD+++K +GVG R A P +E GDE+ ++
Sbjct: 14 RNMPIQTDLVGK-WNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSN 72
Query: 217 STFKTTEMKFKPGEEFEEERADGVKVKSV 303
STFK +K+K G +E+ ADG V SV
Sbjct: 73 STFKNYTLKWKLGTASDEKTADGRDVSSV 101
>Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical
protein T22G5.6 protein.
Length = 137
Score = 73.3 bits (172), Expect = 3e-14
Identities = 33/75 (44%), Positives = 54/75 (72%)
Frame = +1
Query: 58 DFIGKKYKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTE 237
+FIG+ +K+ SENF++++K +GVGL+ RKAA+ +PT+E++ +GD ++F STFK +
Sbjct: 6 EFIGR-WKLVHSENFEEYLKEIGVGLLIRKAASLTSPTLEIKLDGDTWHFNQYSTFKNNK 64
Query: 238 MKFKPGEEFEEERAD 282
+ FK E+F E D
Sbjct: 65 LAFKIREKFVEIAPD 79
>AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding
protein protein 9,isoform b protein.
Length = 137
Score = 70.5 bits (165), Expect = 2e-13
Identities = 34/87 (39%), Positives = 51/87 (58%)
Frame = +1
Query: 43 LPLAMDFIGKKYKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSST 222
+P+ D +GK + +SENFD+++K +GVG R A P +E GDE+ ++ST
Sbjct: 1 MPIQTDLVGK-WNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNST 59
Query: 223 FKTTEMKFKPGEEFEEERADGVKVKSV 303
FK +K+K G +E+ ADG V SV
Sbjct: 60 FKNYTLKWKLGTASDEKTADGRDVSSV 86
>U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding
protein protein 4 protein.
Length = 145
Score = 39.9 bits (89), Expect = 4e-04
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Frame = +1
Query: 61 FIGKKYKMTTSENFDDFMKALGVGLITRKAAN--AVTPTVELRKEGDEYNFVTSSTFKTT 234
F G+ Y++ SENFD+F+ + GV R+ +T + +E +YN ++ K T
Sbjct: 7 FFGR-YQLDKSENFDEFLSSKGVNWFVRQMIKLAGLTKIISQNQEAGKYNMENLTSKKNT 65
Query: 235 EMK-FKPGEEFEEERADG 285
+ ++ G++FE DG
Sbjct: 66 NYQAWELGKKFEAPGLDG 83
>U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding
protein protein 3,isoform b protein.
Length = 150
Score = 37.9 bits (84), Expect = 0.001
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +1
Query: 61 FIGKKYKMTTSENFDDFMKALGVGLITRKAAN--AVTPTVELRKEGDEYNFVTSSTFKTT 234
F GK Y + SENFD+F+ A GV R+ V+ + + +YN ++ K T
Sbjct: 12 FFGK-YDLDRSENFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETPGKYNMENLTSKKNT 70
Query: 235 EMK-FKPGEEFEEERADGVKVK 297
++ G+ FE E DGV K
Sbjct: 71 LYHGWELGKTFEAEGLDGVAHK 92
>U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding
protein protein 3,isoform a protein.
Length = 165
Score = 37.9 bits (84), Expect = 0.001
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +1
Query: 61 FIGKKYKMTTSENFDDFMKALGVGLITRKAAN--AVTPTVELRKEGDEYNFVTSSTFKTT 234
F GK Y + SENFD+F+ A GV R+ V+ + + +YN ++ K T
Sbjct: 27 FFGK-YDLDRSENFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETPGKYNMENLTSKKNT 85
Query: 235 EMK-FKPGEEFEEERADGVKVK 297
++ G+ FE E DGV K
Sbjct: 86 LYHGWELGKTFEAEGLDGVAHK 107
>U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding
protein protein 2 protein.
Length = 161
Score = 34.3 bits (75), Expect = 0.018
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +1
Query: 76 YKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKP- 252
+ + SENFD+++ A G G TRK T K ++ F S+ ++ +K
Sbjct: 30 FDLDHSENFDEYLTAKGYGWFTRKLVTFATFKKVFAKNANKNLFDYSNLTSKKDVFYKNV 89
Query: 253 --GEEFEEERADGVK 291
G +FE E D K
Sbjct: 90 QIGSKFEGEGLDNTK 104
>U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding
protein protein 1 protein.
Length = 159
Score = 33.1 bits (72), Expect = 0.042
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +1
Query: 76 YKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKP- 252
+ + SENFD+++ A G G TRK T K ++ F S+ ++ +K
Sbjct: 28 FDLDHSENFDEYLTAKGYGWFTRKLVTFATFKKVFTKTSNKNLFDYSNLTSKKDVHYKNV 87
Query: 253 --GEEFEEERADGVK 291
G+ F+ E D K
Sbjct: 88 QLGKAFQGEGLDSTK 102
>Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical
protein C08B11.3 protein.
Length = 1244
Score = 29.1 bits (62), Expect = 0.68
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +1
Query: 64 IGKKYKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMK 243
+GK++K TT NF DF + GV L E E D++ S TF + +
Sbjct: 233 MGKEWKRTTKHNFRDFWASSGVPLDMLMTFLDREIEAEYIDEDDQFFTGVSETFNVKDSR 292
>AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical
protein Y71H2AM.17 protein.
Length = 338
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 142 RKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKPGEEFEE 270
+ A + TP D+ T++T TTE K KP E+ EE
Sbjct: 296 KPAESTETPAAGTEPSTDDGAIETTTTTTTTENKEKPEEKMEE 338
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical protein
ZK688.5a protein.
Length = 1620
Score = 27.9 bits (59), Expect = 1.6
Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
Frame = +1
Query: 7 GFDAFFDRTNKNLPLAMDFIGKKYKMTTSENFDDFMKALGVGL----ITRKAANAVTPTV 174
G + F D N+ MD+ +Y + ENFD F+ + G I + + PT+
Sbjct: 1482 GINVFIDNWNR----VMDYWSNRYTDFSEENFDQFLLKVRAGTDWNDIVLNESRQLLPTI 1537
Query: 175 ELRKEGDEYNFVTSSTFKTTEMKFKPGEEFEEERADGVKV 294
+ + +T T + + + E+ D V V
Sbjct: 1538 ASTSSQPSTSSSSLNTVSTNNPRKRNHDGSREDNDDCVDV 1577
>Z79752-4|CAB02083.1| 1188|Caenorhabditis elegans Hypothetical
protein D2005.4 protein.
Length = 1188
Score = 27.5 bits (58), Expect = 2.1
Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 8/96 (8%)
Frame = +1
Query: 1 ARGFDAFFDRTNKNLPLAMDFIGKKYKMTTSENFDDFMKA-LGVGLITRKAANAVTPTV- 174
A G DA D K+ M+ + K +N +K+ + + + N V P V
Sbjct: 94 AAGLDAVKDTDKKDEAATMEAVKHTDKEVKVKNRTSSVKSDISRNSVNENSENEVEPIVP 153
Query: 175 ------ELRKEGDEYNFVTSSTFKTTEMKFKPGEEF 264
E K+G++YN + KT KF +F
Sbjct: 154 DVYTIIEWEKKGEDYNVQQAKFVKTYYRKFASALQF 189
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore
complex protein protein7 protein.
Length = 1217
Score = 27.5 bits (58), Expect = 2.1
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = -1
Query: 254 PGLNFISVVLNVEEVTKLYSSPSLRSSTVGVTALAALRVISPTPSAFMKSS 102
PGL F S++ VT S +L SST + +A+ I+PT S F SS
Sbjct: 842 PGL-FGSILDKETHVTTTPVSVALPSSTDSTQSKSAIPTIAPTMSLFGNSS 891
>Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 26.6 bits (56), Expect = 3.6
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = -1
Query: 236 SVVLNVEEVTKL-YSSPSLRSSTVGVTALAALRVISPTPSAFMKSSKFSDVVILYFLPMK 60
S+ LN E + +S P L + G++ + +R +P+AF++ ++S VI+ F+ +
Sbjct: 401 SLKLNSERARDIDFSLPFLDT---GISIIVKIRSGVLSPTAFLEPFEYSTWVIILFVCIH 457
Query: 59 SMAKGRFLF 33
A FLF
Sbjct: 458 VAAISIFLF 466
>Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 26.6 bits (56), Expect = 3.6
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = -1
Query: 236 SVVLNVEEVTKL-YSSPSLRSSTVGVTALAALRVISPTPSAFMKSSKFSDVVILYFLPMK 60
S+ LN E + +S P L + G++ + +R +P+AF++ ++S VI+ F+ +
Sbjct: 401 SLKLNSERARDIDFSLPFLDT---GISIIVKIRSGVLSPTAFLEPFEYSTWVIILFVCIH 457
Query: 59 SMAKGRFLF 33
A FLF
Sbjct: 458 VAAISIFLF 466
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 87 HIRELRRFHEGTRCGTDHPQGG*CCD 164
++RE R E T C + G CCD
Sbjct: 268 NLREKDRLPENTHCDKERKDGNRCCD 293
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical
protein R08B4.1a protein.
Length = 1137
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 87 HIRELRRFHEGTRCGTDHPQGG*CCD 164
++RE R E T C + G CCD
Sbjct: 268 NLREKDRLPENTHCDKERKDGNRCCD 293
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical protein
ZK688.5b protein.
Length = 1595
Score = 26.6 bits (56), Expect = 3.6
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 7 GFDAFFDRTNKNLPLAMDFIGKKYKMTTSENFDDFMKALGVG 132
G + F D N+ MD+ +Y + ENFD F+ + G
Sbjct: 1482 GINVFIDNWNR----VMDYWSNRYTDFSEENFDQFLLKVRAG 1519
>AF318614-1|AAK01102.1| 433|Caenorhabditis elegans ionotropic
glutamate receptor NMR-2 protein.
Length = 433
Score = 26.6 bits (56), Expect = 3.6
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = -1
Query: 236 SVVLNVEEVTKL-YSSPSLRSSTVGVTALAALRVISPTPSAFMKSSKFSDVVILYFLPMK 60
S+ LN E + +S P L + G++ + +R +P+AF++ ++S VI+ F+ +
Sbjct: 108 SLKLNSERARDIDFSLPFLDT---GISIIVKIRSGVLSPTAFLEPFEYSTWVIILFVCIH 164
Query: 59 SMAKGRFLF 33
A FLF
Sbjct: 165 VAAISIFLF 173
>Z92804-2|CAB07253.2| 321|Caenorhabditis elegans Hypothetical
protein K05D4.3 protein.
Length = 321
Score = 25.8 bits (54), Expect = 6.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 227 LNVEEVTKLYSSPSLRSSTVGVTALAALRVIS 132
L V KL+ P +SS VGV A +R+ S
Sbjct: 286 LKSRNVFKLFCCPFSKSSQVGVVAQPVMRIYS 317
>Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical
protein F46B3.5 protein.
Length = 946
Score = 25.4 bits (53), Expect = 8.4
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 93 RELRRFHEGTRCGTDHPQGG*CCDPNRGA 179
R+ R+ +GT C + G CCD A
Sbjct: 260 RKKERYPKGTHCESGKRDGNKCCDARLAA 288
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,844,737
Number of Sequences: 27780
Number of extensions: 130233
Number of successful extensions: 357
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 357
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 344570176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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